Mergibacter septicus: CEP49_06500
Help
Entry
CEP49_06500 CDS
T08622
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
msep
Mergibacter septicus
Pathway
msep03030
DNA replication
msep03430
Mismatch repair
msep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CEP49_06500 (holB)
03430 Mismatch repair
CEP49_06500 (holB)
03440 Homologous recombination
CEP49_06500 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msep03032
]
CEP49_06500 (holB)
03400 DNA repair and recombination proteins [BR:
msep03400
]
CEP49_06500 (holB)
Enzymes [BR:
msep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CEP49_06500 (holB)
DNA replication proteins [BR:
msep03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CEP49_06500 (holB)
DNA repair and recombination proteins [BR:
msep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CEP49_06500 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
HolB_lid
DUF5578
Motif
Other DBs
NCBI-ProteinID:
AWX14221
LinkDB
All DBs
Position
complement(1441130..1442116)
Genome browser
AA seq
328 aa
AA seq
DB search
MIDLYPWQQTLYQKILDTFLQGRGHHALLFKTETGIGAETLLQQLAAWLLCQKPQANTIC
HQCQSCHLFLQHHHPDFYLLQPLETKTIGVEQVREINEKLYQHSHLSGNKVVWLQGLEKL
SEAGANALLKTLEEPVSGCYFLLQADLAYPILPTIYSRCQSYTLSTPNPQTSMEWLQQQG
LSQTPAQLDTALRINQFRPLTTLHFIQQNQLEKRLHFLRQFWLFTQKKNLNLLLPHFEME
LILTQLDWIIAFLSDALKARLGINQGWICADLASGVVKLSQGYHQQKLLRAVEIVQQMRT
DLVNINAVNQELILIDGLTKLLMEIFNE
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgattgatctctatccttggcaacagacgctatatcaaaaaatcctagatacctttctc
caagggcgaggacatcatgccttattatttaaaactgaaacaggtataggagcagaaacc
ttacttcaacagcttgcagcttggttgctctgtcaaaagccacaagcaaataccatctgc
catcagtgccaaagttgccatttatttcttcaacaccaccaccctgatttttatctttta
caaccattggaaacgaaaaccattggagtagaacaggttcgagaaattaatgaaaaactt
taccaacattcacatctaagcggaaataaagttgtttggttgcaaggcttagaaaagctc
agtgaagctggtgctaatgcccttttgaaaacccttgaagagcccgtttctggttgttat
ttcttattacaagcagatcttgcttatcctatcctaccaaccatctatagtcgttgccaa
agttacactctatcaaccccaaatccgcaaacctcgatggaatggttacaacaacaaggt
ttatcccaaacgccagcacaacttgacacagcattgcggatcaaccaatttcgtccgtta
actactttacactttatacaacaaaaccagttagaaaagcgacttcattttttacgccaa
ttttggttatttacacagaagaaaaaccttaatctactgcttcctcattttgaaatggag
ctgatcctcactcaattagattggattattgcctttttaagtgatgctttaaaagcaaga
ttaggtatcaatcaagggtggatttgtgccgatttggcatcaggtgtagtaaaattaagt
caaggttaccaccaacaaaaattattacgagcagtcgagatcgtccaacaaatgcgtacc
gatctcgtcaatatcaatgccgttaatcaagaactcattttaattgacggcctcactaaa
ctacttatggaaatatttaatgaataa
DBGET
integrated database retrieval system
