Mergibacter septicus: CEP49_08345
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Entry
CEP49_08345 CDS
T08622
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
msep
Mergibacter septicus
Pathway
msep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CEP49_08345 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msep03019
]
CEP49_08345 (pnp)
03016 Transfer RNA biogenesis [BR:
msep03016
]
CEP49_08345 (pnp)
Enzymes [BR:
msep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CEP49_08345 (pnp)
Messenger RNA biogenesis [BR:
msep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CEP49_08345 (pnp)
Transfer RNA biogenesis [BR:
msep03016
]
Prokaryotic type
tRNA degradation factors
CEP49_08345 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
OB_RRP5_4th
KH_2
aRib
KH_SLS1_2
CoV_S2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
AWX14531
LinkDB
All DBs
Position
complement(1808792..1810900)
Genome browser
AA seq
702 aa
AA seq
DB search
MNPIVKKFKYGQHTVILETGAIARQATAAVIASMDDTTVLVTVVAKKDVKEGQDFFPLTV
NYQERTYAAGRIPGGFFKREGRPSENETLIARLIDRPIRPLFPEGFYNEIQIIATVLSVN
PQISPDLVAMIGASAALTLSGVPFNGPIGAARVGFINDQFVLNPTISEQRMSRLDLVVAG
TDKAVLMVESEADILTEEQMLSAVVFGHQQQQVVIQAIKEFAEEVGQPRWDWVAPAKNEA
LINQIKELVESRLGDAYRITEKQARYAEVDAIKADTIATILKNNQDETITESKIIDIIHE
LESQIVRNRILNGEPRIDGRTVDTVRALDICTGVLPRTHGSALFTRGETQALAVATLGTE
RDAQILDELTGEYTDHFLFHYNFPPYSVGETGMIGSPKRREIGHGRLAKRGVAAVMPKLS
EFPYVVRVVSEITESNGSSSMASVCGASLALMDAGVPIKSAVAGIAMGLVKEEDKFVVLS
DILGDEDHLGDMDFKVAGTHSGITALQMDIKIEGITPEIMQIALNQAKSARLHILGVMEK
AIAAPRADISDYAPRIHTMKIDPKKIKDVIGKGGAVIRALTEETGTSIDIDDDGTVKIAA
TDNNAAKSVMSRIEEIVAEIEVDRVYTGKVTRLADFGAFVTVLGNKEGLVHISQIADERV
ERVADYLTVGQEVSVRVVDIDRQGRIRLTMRDIQPTTTTETK
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcctattgttaaaaaatttaaatatggtcaacatactgttattttagaaacgggt
gcaattgcacgtcaggcaactgctgcagttattgcaagtatggatgatactactgtttta
gtaactgttgttgcaaaaaaagacgttaaagaagggcaagattttttcccattaacggta
aattaccaagagcgtacttatgcagctggtcgtattcccggtggttttttcaaacgtgaa
ggtcgcccatctgaaaatgaaaccttgattgcacgtttaatcgatcgtcctatccgtcct
ctctttcctgaaggcttctataacgaaattcaaataatcgcaacagtattatcggttaat
cctcaaattagcccagacttagttgcaatgattggtgcttctgccgcattaaccctttca
ggtgtgccatttaatggccctattggtgctgctcgtgttggtttcatcaatgatcagttt
gttttgaatccaacgattagcgaacaacgcatgagtcgattagatcttgttgtagctgga
acagataaagcagtcttaatggttgaatctgaagcagatattttaactgaagaacaaatg
ttatcagcggttgttttcggtcatcagcaacaacaagtagtcattcaagctattaaagaa
tttgccgaagaagttggtcagccacgctgggattgggttgcacctgcaaaaaatgaagcc
ttaattaaccaaattaaagaattagtagaatctcgattaggcgatgcttatcgtatcact
gaaaaacaagctcgttatgctgaagttgacgcaatcaaagctgacactatcgctactatt
ttaaaaaataatcaagatgaaaccattactgaaagtaaaatcattgatattattcatgaa
ttagaaagccaaattgtacgtaaccgtattttaaatggtgaacctcgcattgatggtcgt
actgttgataccgttcgtgcattagatatctgcactggtgttttacctcgtactcacggt
tccgcacttttcactcgaggggaaactcaagcattagcggttgcaacgcttggaactgag
cgtgatgcccaaattcttgatgaattaaccggggaatatacagatcactttttattccat
tataacttcccgccttattcagtaggggaaacaggtatgatcggttcaccaaaacgccgt
gaaattggacatggtcgtttagcgaaacgtggtgttgctgcggtgatgccaaaattatct
gaatttccttatgtagtacgtgtggtttctgaaattactgaatctaacggttcctcctca
atggcttctgtttgtggtgcatctttagcattaatggatgctggtgtaccaattaaatct
gccgttgctggaatcgcaatggggttagttaaagaagaagataaatttgttgttctttct
gatattttaggcgatgaagatcacttaggtgatatggactttaaagtcgctggaacacat
tctggaataactgcattgcaaatggatattaaaattgaaggtattacacctgaaattatg
caaatcgctcttaaccaagcaaaaagtgcaaggctacacattttaggtgttatggaaaaa
gcgattgcagcacctcgtgctgatatttcagattatgcccctcgtattcatacgatgaaa
attgatccgaagaaaattaaagatgttatcggtaaaggtggtgctgtaattcgtgcgcta
accgaagaaacaggtacttcaattgatattgatgatgatggtacagtgaaaattgctgca
acagataacaatgctgctaaatctgtgatgtctcgaattgaggaaattgttgcagaaatt
gaagttgatcgtgtctatacaggtaaagtcactcgtttagcagattttggtgcatttgtt
acagtattgggtaataaagaaggcttagtgcatatttctcaaattgcagatgaacgtgtt
gaacgagtagcagattacctaacggtagggcaagaagtatctgtgcgtgttgttgatatc
gatcgccaaggtcgcattcgcttaacaatgcgagatattcaaccaacaactaccactgaa
accaaataa
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