Marinarcus sediminis: ACNI3C_06190
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Entry
ACNI3C_06190 CDS
T12018
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mseq Marinarcus sediminis
Pathway
mseq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mseq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACNI3C_06190 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mseq03021
]
ACNI3C_06190 (rho)
03019 Messenger RNA biogenesis [BR:
mseq03019
]
ACNI3C_06190 (rho)
Transcription machinery [BR:
mseq03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ACNI3C_06190 (rho)
Messenger RNA biogenesis [BR:
mseq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACNI3C_06190 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
S1CSD-TOTE-2
AAA_22
OB_RNB
AAA
Spore_III_AA
DUF5010
Motif
Other DBs
NCBI-ProteinID:
XPV86373
LinkDB
All DBs
Position
1233609..1234958
Genome browser
AA seq
449 aa
AA seq
DB search
MEESTTQTKQTTKAPKASSSKASKARTHIPVEGHTIEKLREHTLEELLRIAKDLNVENPQ
ELKRQELMFSILKSQIDAGGFILFTGILEIKDGGFGFLRAMDGNFSDTSNDSYVSATQIK
KFALRTGDIVTGQVRPPNKESEKYYALLKIEAINYLPIHESKNRPLFDNLTPLYSTKRFT
FEYEQTRMTGRMLDLFAPMGKGQRGLIVAPPKTGKTELLKELAHGISRNHPETHLMVLLI
DERPEEVTDMQRSVKGEVYSSTFDLPAHNHVRVAEIVIEKAKRLVEMKKDVVILLDSITR
LARAYNTVTPSSGKVLSGGVDANALHKPKRFFGAARNIEEGGSLTIISTALIDTGSKMDE
VIFEEFKGTGNSEVVLSRNAANKRVYPALDIIKSGTRKEELLLSPEILQKTWILRNAIAS
MDEVEALKFLYSKMQKTKDNEEFFAGMNE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggaagagtcaacaactcaaacgaaacagactacaaaagcgccaaaagcgagtagtagc
aaagccagtaaggcaagaacacacatacctgttgaaggtcatacgattgaaaaactccga
gaacacactttagaagaacttctacgaatcgccaaagatcttaatgttgaaaacccacaa
gaactcaaacgtcaagagctgatgttttccattttaaaatcgcaaattgatgcgggtgga
tttattcttttcacgggtattttagagataaaagatggtggttttggttttttaagagcg
atggacggaaacttttctgatacatctaatgattcttatgtcagtgccacacaaatcaaa
aagtttgctttgcgaacgggagatattgttactggacaagttcgacctcctaacaaagag
agtgaaaaatattatgcgcttttaaaaattgaagcgatcaattaccttcctatccatgag
tcaaaaaacagaccactgtttgacaacttaaccccactttattccaccaaacgatttact
tttgaatacgaacaaacacgaatgacaggccgaatgcttgacttgtttgctcctatgggt
aaaggtcaaagaggactcattgtggctcctccaaaaacagggaaaaccgaactgttaaaa
gaattagcccacggtatttcaagaaatcacccagaaacacacttgatggttttacttatt
gatgagcgaccagaagaggttacagatatgcaaagaagtgttaaaggagaagtctactct
tctacctttgaccttcccgcacacaaccacgtacgagtagcagaaattgtgattgaaaaa
gccaaaagacttgtagagatgaaaaaagatgttgtgattttgcttgactctattaccaga
cttgcccgagcctacaacaccgttaccccatcttctggaaaagtactttcaggtggggtt
gatgccaatgctttacataaaccaaaacgattttttggagctgcaagaaacatagaagag
ggtggaagtttaaccatcatctcaacggcacttattgacactggttcaaaaatggatgaa
gtgatttttgaagagtttaaaggaacaggaaactcagaagtggtactaagcagaaatgct
gcaaacaaaagagtctacccagcccttgatattatcaaatcaggaacaagaaaagaagag
ttacttctttctccagaaattttacaaaaaacatggatattacgaaatgccatcgcctct
atggatgaagtagaagcgttgaaattcttgtacagtaagatgcagaagacaaaagataat
gaagagttttttgcaggaatgaacgaatag
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