Mycobacterium senriense: MTY59_28700
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Entry
MTY59_28700 CDS
T10222
Name
(GenBank) putative formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mser Mycobacterium senriense
Pathway
mser03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mser00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MTY59_28700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mser03400
]
MTY59_28700
Enzymes [BR:
mser01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MTY59_28700
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MTY59_28700
DNA repair and recombination proteins [BR:
mser03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MTY59_28700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Ribosomal_S13
NFACT_N
DUF7577
TMEM106_N
Motif
Other DBs
NCBI-ProteinID:
BCZ23015
LinkDB
All DBs
Position
2946804..2947667
Genome browser
AA seq
287 aa
AA seq
DB search
MPELPEIEALVDHLRRHAVGLTIGRVDVAALSVLKTFDPPINALHGQAVVGAERWGKYLG
LRTDNLFLIAHLSRAGWLRWSDKLAAAPLRPGKGPIALRVHLGTPGEAPGFDLTEAGTQK
RLAVWLVDDPAQVPGIAALGPDALDLDLGALADVLAGNTGRIKTVITDQKVIAGIGNAYS
DEILHVARISPFATAGKLSDAQLATLHDAMVSVLTDAVSRSVGQGAAMLKGEKRSGLRVH
ARTGLPCPVCGDTVREVSFADKSFQYCPTCQTGGKILADRRMSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaactacccgagatcgaagcgctggtcgaccatctgcggcgccacgccgtcggc
ctgacgatcgggcgggtcgacgtcgccgccctgtccgtgctgaagaccttcgacccgccg
atcaatgcgctgcacggccaggccgttgtcggggccgagcggtggggcaagtacctgggg
ctgcgcaccgacaatcttttcctgatcgcccatctgtcgcgtgcgggctggctgcggtgg
tcggacaagctggccgcggcgccgctgcggcccggcaagggcccgatcgcgctgcgggtg
cacctgggcacgcccggtgaggcgccgggcttcgatctcaccgaggccggcacccagaaa
cggctggcggtgtggctggtcgacgacccggcccaggtccccgggatcgccgcgctcggc
ccggacgcgttggacctggacctcggcgcgctggccgacgtgctggcgggcaacaccggc
cggatcaagacggtcatcaccgaccagaaggtgatcgccgggatcggcaacgcctacagc
gacgagatcctgcacgtcgcgcgcatttctccgttcgccactgccggcaagctgtccgac
gcgcagctcgccacgctgcacgacgcgatggtctcggtactcaccgacgcggtgagccgg
tccgtcgggcagggggccgccatgctcaagggcgagaagcgctccggattgcgggtgcat
gcccgcaccgggctgccctgcccggtatgcggggacaccgtgcgcgaagtgtcgttcgcg
gacaagtctttccagtactgcccgacgtgccagaccggcggcaagatcctggcggaccgg
cgcatgtcgcgtttgctgaagtag
DBGET
integrated database retrieval system
