Mycobacterium senriense: MTY59_52230
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Entry
MTY59_52230 CDS
T10222
Symbol
rnj
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mser Mycobacterium senriense
Pathway
mser03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mser00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MTY59_52230 (rnj)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mser03019
]
MTY59_52230 (rnj)
Messenger RNA biogenesis [BR:
mser03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MTY59_52230 (rnj)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
BCZ25368
UniProt:
A0ABM7SXN6
LinkDB
All DBs
Position
complement(5549967..5551643)
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AA seq
558 aa
AA seq
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MDVDLAPPGPLAVGGLRVTALGGISEIGRNMTVFEHLGRLLIIDCGVMFPTHDEPGVDLI
LPDLRHISDRLDDIEALVLTHAHEDHIGGIPFLLKLRPDIPVVGSKFTLALVAAKCREHR
LKPVFVEVAEGQKSTHGVFECQYFAVNHSIPDALAIAVHTGAGTILHTGDIKLDQLPLDG
RPTDLPGMSRLGDAGVDLFLCDSTNSEHPGVGPSESEVGPTLHRLIRGADGRVIVACFAS
NVDRVQQIIDAAVALGRRVSFVGRSMVRNMGIARELGFLRVADSDVIDIGAAEMMPADRV
VLITTGTQGEPMSALSRMSRGEHRSITLTAGDLVVLASSLIPGNEEAVYGVIDELAKIGA
RVVTNAQARVHVSGHAYAGELLFLYNGIRPRNVMPVHGTWRMLRANAKLAARTGVPEESI
LLAENGVSVDLVAGKASIAGAVPVGKMFVDGLIDGDVGDITLGERLILSSGFVAVTVVVA
RGTGRPVSPPHLQSRGFSEDPKALEPAVRRVEAELEALLAENITDPSRIAQGVRRTVGKW
VGETYRRQPMIVPTVIEV
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
gtggacgtagacctcgccccgccaggccccttggccgtgggagggttgcgggtcaccgct
ctcggcggcatcagcgaaatcggccgcaacatgacggttttcgaacacctgggccggctg
ttgatcatcgactgcggcgtgatgttccccacccacgacgagcccggcgtcgacctgatc
ctgccggatctgcgccacatctccgaccggctcgacgacatcgaggccctggtgctcacc
cacgcgcacgaggaccacatcgggggcatcccgtttctgctcaagctgcgccccgacatc
ccggtggtcggttcgaagttcaccctcgcactggtcgccgcgaagtgccgcgaacaccgc
ctcaagccggtcttcgtcgaggtggccgaggggcagaagagcacacacggcgtatttgaa
tgccagtacttcgccgtcaaccactccatccccgacgcgctggcgatcgccgtgcacacc
ggcgcgggaaccatcctgcacaccggcgatatcaagctcgaccagcttccgctggacggc
cggccgaccgacctgcccggcatgtcccggctcggcgacgcgggtgtggacctgttccta
tgcgactcaaccaattccgagcacccaggcgtcgggccatcggaaagcgaagtgggcccg
acgttgcaccgcctgattcgcggcgccgacggccgcgtcatcgtggcgtgtttcgcctcc
aacgtggaccgggttcagcaaatcatcgatgccgcagtagctttgggtcggcgggtatcg
ttcgtcggccgatccatggtgcgcaacatgggcattgcccgcgaactcggtttcctgcgg
gttgccgactcggacgtgatcgacatcggcgccgccgagatgatgccggcggaccgggtg
gtgctgatcaccaccggcacccagggcgaaccgatgtcggcgctgtcgcggatgtcgcgc
ggcgagcaccgcagcatcacgctgaccgcgggtgacctggtggttttggcgtcttcgctg
atcccgggcaacgaggaagcggtctacggcgtcatcgacgagctcgccaagatcggggcc
cgcgtcgtcaccaacgcccaagcgcgcgtgcatgtttcgggccacgcgtacgccggggaa
ctgttgttcctgtacaacgggattcggccgcgcaacgtcatgcccgtgcacgggacgtgg
cgcatgctgcgcgccaacgccaaactggcggcccgcaccggcgtgccggaggagtcgatc
ctgctggccgagaacggggtgagcgtcgacctggtcgcgggtaaggcctcgatcgccggc
gcggtgccggtcggcaagatgttcgtcgacggcctgatcgacggcgacgtcggcgatatc
accttgggcgagcggctcattctgtcgtcgggtttcgtggcggtgaccgtggtggtcgcg
cgcggcaccgggcgtccggtctccccgccgcacctgcagtcgcgcggattctccgaggat
cccaaggcgctcgagcccgccgtgcgcagggtggaggccgagctggaagcgctgctggcc
gagaacatcaccgatccgagccgcatcgcccagggcgtgcggcgcaccgtcggcaaatgg
gtgggcgaaacctaccgccggcagccgatgatcgtgccgaccgtcatcgaagtctga
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