KEGG   Mycobacterium senriense: MTY59_52230
Entry
MTY59_52230       CDS       T10222                                 
Symbol
rnj
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
mser  Mycobacterium senriense
Pathway
mser03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mser00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MTY59_52230 (rnj)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mser03019]
    MTY59_52230 (rnj)
Messenger RNA biogenesis [BR:mser03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MTY59_52230 (rnj)
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C RMMBL Lactamase_B_2 Lactamase_B Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: BCZ25368
UniProt: A0ABM7SXN6
LinkDB
Position
complement(5549967..5551643)
AA seq 558 aa
MDVDLAPPGPLAVGGLRVTALGGISEIGRNMTVFEHLGRLLIIDCGVMFPTHDEPGVDLI
LPDLRHISDRLDDIEALVLTHAHEDHIGGIPFLLKLRPDIPVVGSKFTLALVAAKCREHR
LKPVFVEVAEGQKSTHGVFECQYFAVNHSIPDALAIAVHTGAGTILHTGDIKLDQLPLDG
RPTDLPGMSRLGDAGVDLFLCDSTNSEHPGVGPSESEVGPTLHRLIRGADGRVIVACFAS
NVDRVQQIIDAAVALGRRVSFVGRSMVRNMGIARELGFLRVADSDVIDIGAAEMMPADRV
VLITTGTQGEPMSALSRMSRGEHRSITLTAGDLVVLASSLIPGNEEAVYGVIDELAKIGA
RVVTNAQARVHVSGHAYAGELLFLYNGIRPRNVMPVHGTWRMLRANAKLAARTGVPEESI
LLAENGVSVDLVAGKASIAGAVPVGKMFVDGLIDGDVGDITLGERLILSSGFVAVTVVVA
RGTGRPVSPPHLQSRGFSEDPKALEPAVRRVEAELEALLAENITDPSRIAQGVRRTVGKW
VGETYRRQPMIVPTVIEV
NT seq 1677 nt   +upstreamnt  +downstreamnt
gtggacgtagacctcgccccgccaggccccttggccgtgggagggttgcgggtcaccgct
ctcggcggcatcagcgaaatcggccgcaacatgacggttttcgaacacctgggccggctg
ttgatcatcgactgcggcgtgatgttccccacccacgacgagcccggcgtcgacctgatc
ctgccggatctgcgccacatctccgaccggctcgacgacatcgaggccctggtgctcacc
cacgcgcacgaggaccacatcgggggcatcccgtttctgctcaagctgcgccccgacatc
ccggtggtcggttcgaagttcaccctcgcactggtcgccgcgaagtgccgcgaacaccgc
ctcaagccggtcttcgtcgaggtggccgaggggcagaagagcacacacggcgtatttgaa
tgccagtacttcgccgtcaaccactccatccccgacgcgctggcgatcgccgtgcacacc
ggcgcgggaaccatcctgcacaccggcgatatcaagctcgaccagcttccgctggacggc
cggccgaccgacctgcccggcatgtcccggctcggcgacgcgggtgtggacctgttccta
tgcgactcaaccaattccgagcacccaggcgtcgggccatcggaaagcgaagtgggcccg
acgttgcaccgcctgattcgcggcgccgacggccgcgtcatcgtggcgtgtttcgcctcc
aacgtggaccgggttcagcaaatcatcgatgccgcagtagctttgggtcggcgggtatcg
ttcgtcggccgatccatggtgcgcaacatgggcattgcccgcgaactcggtttcctgcgg
gttgccgactcggacgtgatcgacatcggcgccgccgagatgatgccggcggaccgggtg
gtgctgatcaccaccggcacccagggcgaaccgatgtcggcgctgtcgcggatgtcgcgc
ggcgagcaccgcagcatcacgctgaccgcgggtgacctggtggttttggcgtcttcgctg
atcccgggcaacgaggaagcggtctacggcgtcatcgacgagctcgccaagatcggggcc
cgcgtcgtcaccaacgcccaagcgcgcgtgcatgtttcgggccacgcgtacgccggggaa
ctgttgttcctgtacaacgggattcggccgcgcaacgtcatgcccgtgcacgggacgtgg
cgcatgctgcgcgccaacgccaaactggcggcccgcaccggcgtgccggaggagtcgatc
ctgctggccgagaacggggtgagcgtcgacctggtcgcgggtaaggcctcgatcgccggc
gcggtgccggtcggcaagatgttcgtcgacggcctgatcgacggcgacgtcggcgatatc
accttgggcgagcggctcattctgtcgtcgggtttcgtggcggtgaccgtggtggtcgcg
cgcggcaccgggcgtccggtctccccgccgcacctgcagtcgcgcggattctccgaggat
cccaaggcgctcgagcccgccgtgcgcagggtggaggccgagctggaagcgctgctggcc
gagaacatcaccgatccgagccgcatcgcccagggcgtgcggcgcaccgtcggcaaatgg
gtgggcgaaacctaccgccggcagccgatgatcgtgccgaccgtcatcgaagtctga

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