Mycoplasma seminis: Q8852_03300
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Entry
Q8852_03300 CDS
T09354
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mses
Mycoplasma seminis
Brite
KEGG Orthology (KO) [BR:
mses00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mses03032
]
Q8852_03300 (topA)
03400 DNA repair and recombination proteins [BR:
mses03400
]
Q8852_03300 (topA)
Enzymes [BR:
mses01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Q8852_03300 (topA)
DNA replication proteins [BR:
mses03032
]
Prokaryotic type
DNA Topoisomerases
Q8852_03300 (topA)
DNA repair and recombination proteins [BR:
mses03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Q8852_03300 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WLP85324
LinkDB
All DBs
Position
complement(782061..783935)
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AA seq
624 aa
AA seq
DB search
MDKKLIIVESPNKVKTIQKYVGDDYNVIASVGHILKMKTTGAFGFGINMETWEPEYSADS
SKKNVIKQLKDAVKQASYVYIATDPDREGEAIGYHLVEYLKLKGNYARIKYNEITKDAIL
KSLAKPQELDFNLIDAQKARRMLDRIIGFRLSKLMRVKLKQTPGVPTAGRVQSIALKLIV
DRENEIRAFVPEKYATLSAKLLGNEVLANYFNDEVVGDRKEWIIGDDLDKFKKYFATTTK
ALKVIDKKVSQRKVAAMQPFKQSVIYRRSPLSSQMTQYVLQKLYEGYGDGGLISYPRTDS
TRLSQDFINHAHSYIESKWGKDYVASEIKGFSGDQDAHEAIRPTDVELTPEKAKMLYKLS
EAEFKIYKMIYENTLQALIKQPIREVTAYTYENGDYKFRNSYSRIHFDGYYVVSGKELED
INPNYEINDVIEVEDFIFEDKETKPAPRYNDGSLIEALDNIKVGRPSTFASTVQIVKDRR
YALKQNGALVPTEFGEIVLKNLIKAFPNIINEDYTAQVEAELDQIAEDQINKNEVMDEFW
GRFEAEYAQADEKMETYRFPLREFPEPCPEDGGVLVERFNKKNQAFVACKNFPKCKYTAS
LPEEKSEDEEENLPEDITQNNDEE
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggacaagaaattaataatagtagagtcacctaataaggtaaagacaattcaaaaatat
gttggagatgactataatgttatcgcttcagttggtcacattttaaaaatgaaaaccact
ggagcatttggttttggtatcaacatggaaacttgagaacctgaatattcagccgattca
agcaaaaagaatgtaattaagcaattaaaagatgcggttaagcaagcttcttatgtttat
attgcaactgaccccgaccgtgaaggagaggcaattggttaccatttagttgaatactta
aaattaaaaggaaactatgcaagaattaaatataacgaaattactaaagatgcaatttta
aaatcgcttgctaaaccacaagaacttgattttaatttaattgatgctcaaaaagctcgt
agaatgcttgatagaattattggatttagactttctaaacttatgagagttaaattaaaa
caaactccaggagttccaacagcaggaagagtgcaaagtattgctttaaagcttattgta
gatcgtgaaaatgaaattagagcatttgtgcctgaaaaatatgcaactttaagtgctaaa
ttactaggaaatgaagtacttgcaaattactttaatgatgaagttgttggtgatagaaaa
gaatgaattattggtgatgacttagataagtttaaaaagtattttgcaactactacaaag
gctttaaaggttattgataaaaaagtttcacaacgtaaagttgctgctatgcaaccattt
aaacaatcagtaatttatcgtcgttcaccactttcttctcaaatgactcaatatgtttta
caaaaactatatgaaggatacggtgatggtgggcttatttcatacccaagaactgattca
actcgtttatctcaagactttataaaccatgcacatagttatattgaatcaaaatgagga
aaagattatgtagctagcgaaataaaaggatttagcggagatcaagatgcccacgaggca
attagacctactgatgttgaacttacaccagaaaaagctaaaatgctttataaattatct
gaagctgaattcaagatttacaaaatgatttatgaaaacaccttacaagcattaattaaa
caaccaattagagaagttactgcttatacatatgaaaatggtgattataaatttagaaat
tcatattcaagaattcattttgatggatattatgtagtaagtggaaaagaacttgaagat
attaatccaaattatgaaattaatgatgttattgaggttgaagactttatttttgaagat
aaggaaacaaaaccagctccaagatataatgatgggtcattaatcgaagcacttgataat
attaaagttgggcgtccttcaacatttgcttcaactgtgcagatagttaaagatagaaga
tatgcattaaaacaaaatggtgcattagttccaacagaattcggtgaaatagttcttaag
aatttaatcaaagctttccctaacattattaatgaagattatacagctcaagttgaagct
gaacttgatcaaattgctgaagatcaaattaataaaaacgaagttatggatgaattttga
ggtcgttttgaagctgaatatgctcaagctgatgaaaagatggaaacttacagattccca
ttaagagaattccctgaaccttgtccagaagatggtggagttcttgttgaaagatttaac
aagaaaaaccaagcttttgtcgcatgtaaaaacttccctaaatgtaaatatactgcttca
cttcctgaagaaaaatctgaagatgaagaagaaaatttaccagaggatattactcaaaat
aatgatgaagaataa
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