Manduca sexta (tobacco hornworm): 115439829
Help
Entry
115439829 CDS
T07401
Name
(RefSeq) FACT complex subunit Ssrp1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
msex
Manduca sexta (tobacco hornworm)
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msex03000
]
115439829
03036 Chromosome and associated proteins [BR:
msex03036
]
115439829
Transcription factors [BR:
msex03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
115439829
Chromosome and associated proteins [BR:
msex03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
115439829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_WDHD1
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
115439829
NCBI-ProteinID:
XP_030019707
LinkDB
All DBs
Position
14:complement(10011182..10024212)
Genome browser
AA seq
725 aa
AA seq
DB search
MNMEFLEYNDVSAEIKGAMVPGRLKMTDQNIVFKNSKTGKVEQISSNDIEMVNFQKFIGS
WGLRIFLKNGTLHRYGGFKDGEQEKVAKFFKTNYSKDMLEKELSLKGWNWGTAKFNGAVL
SFNVGSNTAFEIPLHYVSQCNTGKNEVTLEFHQNDDTPVSLMEMRFHIPTSELAGDMDAV
EAFHQQVMNKASVISVSGDAIAIFRELQCLTPRGRYDIKVFQTFFQLHGKTFDYKIPMST
VLRLFLLPHKDTRQMFFVVSLDPPIKQGQTRYHYLVLLFGIEEETSLELPFTEEELKEKY
EGKITKELSGPTYEVLAKIMKVIINRRVTGPGDFLGHHKTPAIACSYKAAAGYLYPLEKG
FIYVHKPPVHIRFEEIASVNFARGGASSTKSFDFEIELKSGSIHTFSSIEKGEYDKLFDY
ITSKKLHVKNTGKNDKALYDDDFGDSDTEKEPDAYLERVKAEAKERDSNDSDGSDESTDE
DFNPDKARESDVAEEYDTNASSSGESDASAASDDSKKEKEKKKDKKPKKAKTVPEAPRKR
KEKSKKREKDVNAPKRPATAFMLWLNENRKKIIDENPGMKITDVAKKGGEQWRDLKDKSE
WEEKASKAKEEYNIAMKKYKDSGAADEFKQKKKQAEKERKQVEKKGKAPVPSKKAKNTSA
GTGTKFTSKEYIEDDDSSSDSDNDKKKKDTKDSKESKKEKAKSSSSEAEASSGSGDESGS
GSGSA
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgaacatggaatttcttgaatacaacgacgtatcggctgagataaaaggagccatggtt
cctggaagattaaaaatgactgatcaaaacatagtatttaaaaacagtaaaactggcaaa
gttgagcaaatatcttccaatgatattgagatggtaaacttccaaaagtttattggctct
tggggtttaagaatatttctaaagaatggcacactgcacagatatggcggctttaaagat
ggggaacaagagaaggtggcaaagttcttcaagacaaactacagtaaagacatgttggag
aaggaactgtccctgaaaggctggaactgggggacggccaagttcaacggagcagtgctc
agtttcaatgtaggctcaaacacggcattcgagatcccgttgcactatgtgtctcagtgc
aatacaggcaagaatgaagtcacactggagtttcatcagaacgacgacaccccagtctca
ctaatggagatgcgtttccacatacccacaagcgagctggcaggcgacatggatgctgtt
gaagcattccaccagcaagtgatgaacaaggccagtgtcatctctgtctctggagatgcc
atcgctatattcagagaactgcaatgtcttacgcctcgtggtcgctacgacatcaaagtg
ttccaaacgttcttccaactccatggtaagactttcgactacaagataccgatgtcgacg
gtgctgcggttgttcctcctgcctcacaaggacacgcggcagatgttcttcgtggtgtct
ttggatccgcccatcaagcagggtcagacgcgataccactatctggtgttgctgttcggc
attgaagaggagactagcttggagctaccatttacagaagaagaattaaaagaaaaatac
gagggtaaaattacaaaggagctatcagggccgacttatgaagtgctggcaaaaataatg
aaagtcattatcaacaggagagtcactggacctggagatttcttagggcaccacaagacg
ccagcgatagcgtgttcgtacaaggcggcggcgggctacttatacccgctggagaagggc
ttcatctacgtgcacaagccgcccgtgcacatccgcttcgaggagatcgcatccgtcaac
ttcgccagagggggggcctcttccaccaaatcttttgatttcgagatagaattaaaatca
ggcagtattcacacattcagcagtatagagaaaggggaatacgacaaactctttgactac
atcacctccaaaaaacttcacgtcaagaacactggcaagaatgacaaggcgctgtacgac
gacgacttcggcgactcggacaccgagaaggagccggacgcgtacctcgagcgagtgaag
gcggaggccaaggagcgcgactccaacgacagcgacggctccgacgagagcaccgacgag
gacttcaacccggacaaggccagggagagtgacgtcgcggaggagtacgacacgaacgct
tcgtcgtcgggtgaatccgacgcatccgcagcgtccgacgacagcaagaaagagaaggag
aagaagaaagataaaaaaccaaagaaggccaagactgttccggaagcgccgcgcaaacgc
aaggagaagtcaaagaagcgtgagaaagacgtgaacgcgccgaagcgccccgccaccgcc
ttcatgctgtggctcaacgagaaccgcaagaagatcatcgacgagaaccccggcatgaag
atcaccgacgtcgccaagaagggcggcgagcagtggcgcgacctcaaggacaagtcggaa
tgggaggagaaagcaagcaaagcaaaagaagaatataacatcgcaatgaagaaatacaaa
gatagcggcgctgcggacgagttcaaacaaaagaagaagcaagcggagaaggaaagaaag
caagtggagaagaaggggaaagcgccggtgccgagcaagaaagctaagaacacaagcgca
ggcaccggcaccaagttcaccagcaaggagtatatagaggatgatgacagctcatcagac
tccgacaatgataagaagaagaaagacaccaaagatagcaaagagtcaaagaaggagaaa
gcgaagagttcatcgtcagaggcggaggcgtcgtccggctccggcgacgagagcggcagc
ggcagcgggagtgcctga
DBGET
integrated database retrieval system
