KEGG   Manduca sexta (tobacco hornworm): 115440740
Entry
115440740         CDS       T07401                                 
Name
(RefSeq) WD repeat-containing protein 3
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
msex  Manduca sexta (tobacco hornworm)
Pathway
msex03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:msex00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    115440740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:msex03009]
    115440740
Ribosome biogenesis [BR:msex03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    115440740
SSDB
Motif
Pfam: Beta-prop_WDR3_2nd Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st WD40_Gbeta Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd DSE1_N Beta-prop_EML Beta-prop_SCAP ANAPC4_WD40 Beta-prop_HPS5 Utp12 Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_DCAF4 Beta-prop_IFT140_1st CFAP251_N ASA1 WDR90_beta-prop_4th NBCH_WD40 Beta-prop_VPS8 Beta-prop_Aladin Beta-prop_NOL10_N Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_WDR41 PEP5_VPS11_N Beta-prop_ACSF4 Beta-prop_EIPR1 PAC11 WDR54 WD40_like WD40_MABP1-WDR62_1st WD_LRWD1 Beta-prop_Vps41 Beta-prop_IP5PC_F Beta-prop_RIG_1st Beta-prop_NUP159_NUP214 Utp21 UCP007778 PROPPIN Utp8_b_propeller
Other DBs
NCBI-GeneID: 115440740
NCBI-ProteinID: XP_030021028
LinkDB
Position
12:complement(11173678..11181033)
AA seq 923 aa
MGLTKQYLRYVPSGVFNVIASGDCNSVHVSLNGVSGRYIAVGACEHVIIWDMRLGEKAQV
LPGENIVVSQIAASPTGNHMAVGYVDGNINVFELTNNDVVCVFAGHKSAVTCLQYDDQGH
RLVSGSKDTEVILWDVVSETGKARFSGHKGVITSVLFINGKNCVVSSSKDTFVKFWDIET
KHCFKTLGGHQMEVWSAVLMKEERYLVTGSMDQELRVWKLNWTDDVKDEDKLAQQLEIVK
LEEADNLEDSSVLQCHQVGTLIRGGKGRVVGLATDLGQTVLACYGTDSLLELFAFCSDDE
AKVRKEKRVKKQRKKLAKLKESGEVDPEATEVPELLTLTDEVRRLSSVKLGAKLKSTTLL
LGTSGEVRVGVTLANNTVELHSLNIADGSEVKCLKQISQPGHQKEPRCIAISSDNLAILS
ASADSIKLWNRANQSCLRTIPVAGGRPSSVCFLPGDRHALAGCSDGALLLLDVAAARTLE
HVPAHSADCCSVGLTPDMRGCFSGGADKTVKLWQFELIDDPTGESKAKVLSLLHTRTLEL
EEQVLAVKISPNSKFIAVALLDSTVKIFFLDTFKFYLSLYGHKLPVLCLDISYDSNIIAT
GSADRNVKIWGMDFGDCHKSIFAHNDSVTSLQFVPSTHYFFTSSKDGKIKQWDADTYENI
ITLNGHAGASHGVCVGAGGLHAASAGADAALRLYSRTDEPLVLGDTDEQEEGLATGDTHA
PVPGLPGLVMPTKKTIGAEKAADSIMECLQVGAEYKRELAEARGRAVQPPLLMAAYNCTT
PEDFFVEVIKRVRSSELEEALLLVPFSAACEMVRMLPALLERGDVAELASRAALLLLRLH
HAPLVANRGLLKHLIQIQAKAALKLNELRDMVGYNVHALGWMRRELEAAESEQLFREATT
ARRNKDKRRRARQALKRPIVTIT
NT seq 2772 nt   +upstreamnt  +downstreamnt
atgggtcttacaaagcaataccttcgctacgtccctagcggagtctttaatgtaatagct
agtggagactgtaatagcgttcacgtatcactgaacggagttagtggaaggtatatagcg
gtaggcgcgtgtgaacatgttattatttgggatatgcgtctcggcgagaaggcacaagtc
ttgccgggtgagaatattgtggtttcacagattgcagccagccccactggcaaccacatg
gcagtgggctacgtggacggtaatataaacgtgtttgaattgaccaacaatgatgtagtg
tgcgtatttgctggccataagtctgctgtcacatgcctgcagtatgacgatcaggggcac
agacttgtgtctgggtctaaggacacagaagttatcctatgggacgtagtatcggagacc
ggtaaggcaagattcagtggacacaagggagtgatcaccagtgtactgttcattaacggc
aagaactgtgttgtcagctcatctaaggacacattcgtaaagttctgggatattgagacc
aagcattgcttcaaaacactcggtggacatcagatggaggtgtggtcagcagtcctgatg
aaggaagaaaggtacttggtgacaggcagcatggatcaggagctgcgtgtgtggaaattg
aactggactgatgatgtcaaagatgaagataaacttgctcaacaattggaaattgtgaaa
ctggaggaagctgacaatttggaggatagttctgttctacaatgtcaccaagtgggtacc
ctaatccgtggaggcaaaggtcgagtcgtaggactagccacagaccttggtcagaccgtg
ttagcttgttatggaactgattcgttactagaattgttcgcgttttgttctgatgacgaa
gctaaagtgagaaaggaaaaaagggttaagaaacaaagaaaaaaattagcgaaattaaaa
gaatctggtgaggtagatccggaggctaccgaagtgccagagttgctcactctgactgat
gaagtgaggcggctatcgtcagtaaagcttggtgctaagttgaagtcaacaacactattg
cttggcacgtctggtgaagtgcgtgttggtgttactctcgccaacaacactgttgagttg
cacagcctgaacatagctgatggcagtgaagtcaaatgcctaaagcagatatcacagcct
ggccatcaaaaggagccgcggtgtatagcaatcagttcagataacttggccatactatct
gcctctgcagactcaattaaattgtggaacagagcgaaccagtcgtgcctccgcacgatc
ccggtggcgggcgggcggccgagcagcgtgtgcttcctgcccggcgaccggcacgcgctg
gcgggctgcagcgacggcgcgctgctgctgctggacgtggcggccgcgcgcacgctcgag
cacgtgcccgcgcactccgccgactgctgctccgtcggactcacgccggatatgagaggt
tgtttctccggcggcgccgataagacagtgaaattatggcaatttgaattaatagatgat
ccgacgggagaatcaaaagcaaaggtattgtcattacttcatacaagaacattggagcta
gaggaacaggtgctggctgtgaaaataagtccaaacagcaagttcattgctgtggcgcta
ctggattctacggttaaaatattcttcctcgatacatttaagttctacctgtccctctac
ggccacaagctgccagtactatgtttggacatcagctacgactctaatataatagcgacc
ggttctgccgaccgcaacgtcaagatatggggcatggacttcggcgactgtcacaagtcg
atcttcgcgcacaacgactccgtgacgtcactgcagttcgtgccgagcacgcattatttt
ttcacctcgtcgaaggatggcaagataaagcaatgggacgctgatacttatgagaatatt
attactttgaatggccacgcgggcgcgagtcacggcgtgtgcgtgggcgcgggcgggctg
cacgccgcctcggccggcgccgacgccgcgctgcgcctgtactcgcgcaccgacgagccg
ctcgtgctcggcgacaccgacgagcaggaggagggactcgccaccggcgatacacacgcc
ccggtaccaggtctacctggcttagtaatgccgactaagaaaaccatcggagcggaaaag
gcggcggactcgataatggagtgcctgcaagtgggcgcggagtacaaacgcgagctggcg
gaggcgaggggccgcgccgtgcagcctccgctattgatggctgcctacaactgcaccacg
ccagaggacttcttcgtcgaagttatcaaaagagtgcgatctagtgagctagaagaagcg
ctgctgctggtcccgttcagcgcggcgtgcgagatggtgcgcatgctgccggcgctgctg
gagcgcggcgacgtggcggagctggcgagccgcgccgcgctgctgctgctgcgtctgcac
cacgcgccgctcgtcgccaaccgcggcctgctcaagcacctcatacagatacaggccaag
gcggcgctcaagctcaacgaactccgggacatggtggggtacaacgtgcacgcgctgggc
tggatgcggcgcgagttggaggcggctgagagcgagcagctgttccgagaggcgaccact
gcgcgacgcaataaagacaagcggcgacgcgcgagacaggctctcaagagacccatcgtt
accatcacttga

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