Manduca sexta (tobacco hornworm): 115440740
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Entry
115440740 CDS
T07401
Name
(RefSeq) WD repeat-containing protein 3
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
115440740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msex03009
]
115440740
Ribosome biogenesis [BR:
msex03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
115440740
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
DSE1_N
Beta-prop_EML
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_HPS5
Utp12
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_IFT140_1st
CFAP251_N
ASA1
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_VPS8
Beta-prop_Aladin
Beta-prop_NOL10_N
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_WDR41
PEP5_VPS11_N
Beta-prop_ACSF4
Beta-prop_EIPR1
PAC11
WDR54
WD40_like
WD40_MABP1-WDR62_1st
WD_LRWD1
Beta-prop_Vps41
Beta-prop_IP5PC_F
Beta-prop_RIG_1st
Beta-prop_NUP159_NUP214
Utp21
UCP007778
PROPPIN
Utp8_b_propeller
Motif
Other DBs
NCBI-GeneID:
115440740
NCBI-ProteinID:
XP_030021028
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All DBs
Position
12:complement(11173678..11181033)
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AA seq
923 aa
AA seq
DB search
MGLTKQYLRYVPSGVFNVIASGDCNSVHVSLNGVSGRYIAVGACEHVIIWDMRLGEKAQV
LPGENIVVSQIAASPTGNHMAVGYVDGNINVFELTNNDVVCVFAGHKSAVTCLQYDDQGH
RLVSGSKDTEVILWDVVSETGKARFSGHKGVITSVLFINGKNCVVSSSKDTFVKFWDIET
KHCFKTLGGHQMEVWSAVLMKEERYLVTGSMDQELRVWKLNWTDDVKDEDKLAQQLEIVK
LEEADNLEDSSVLQCHQVGTLIRGGKGRVVGLATDLGQTVLACYGTDSLLELFAFCSDDE
AKVRKEKRVKKQRKKLAKLKESGEVDPEATEVPELLTLTDEVRRLSSVKLGAKLKSTTLL
LGTSGEVRVGVTLANNTVELHSLNIADGSEVKCLKQISQPGHQKEPRCIAISSDNLAILS
ASADSIKLWNRANQSCLRTIPVAGGRPSSVCFLPGDRHALAGCSDGALLLLDVAAARTLE
HVPAHSADCCSVGLTPDMRGCFSGGADKTVKLWQFELIDDPTGESKAKVLSLLHTRTLEL
EEQVLAVKISPNSKFIAVALLDSTVKIFFLDTFKFYLSLYGHKLPVLCLDISYDSNIIAT
GSADRNVKIWGMDFGDCHKSIFAHNDSVTSLQFVPSTHYFFTSSKDGKIKQWDADTYENI
ITLNGHAGASHGVCVGAGGLHAASAGADAALRLYSRTDEPLVLGDTDEQEEGLATGDTHA
PVPGLPGLVMPTKKTIGAEKAADSIMECLQVGAEYKRELAEARGRAVQPPLLMAAYNCTT
PEDFFVEVIKRVRSSELEEALLLVPFSAACEMVRMLPALLERGDVAELASRAALLLLRLH
HAPLVANRGLLKHLIQIQAKAALKLNELRDMVGYNVHALGWMRRELEAAESEQLFREATT
ARRNKDKRRRARQALKRPIVTIT
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgggtcttacaaagcaataccttcgctacgtccctagcggagtctttaatgtaatagct
agtggagactgtaatagcgttcacgtatcactgaacggagttagtggaaggtatatagcg
gtaggcgcgtgtgaacatgttattatttgggatatgcgtctcggcgagaaggcacaagtc
ttgccgggtgagaatattgtggtttcacagattgcagccagccccactggcaaccacatg
gcagtgggctacgtggacggtaatataaacgtgtttgaattgaccaacaatgatgtagtg
tgcgtatttgctggccataagtctgctgtcacatgcctgcagtatgacgatcaggggcac
agacttgtgtctgggtctaaggacacagaagttatcctatgggacgtagtatcggagacc
ggtaaggcaagattcagtggacacaagggagtgatcaccagtgtactgttcattaacggc
aagaactgtgttgtcagctcatctaaggacacattcgtaaagttctgggatattgagacc
aagcattgcttcaaaacactcggtggacatcagatggaggtgtggtcagcagtcctgatg
aaggaagaaaggtacttggtgacaggcagcatggatcaggagctgcgtgtgtggaaattg
aactggactgatgatgtcaaagatgaagataaacttgctcaacaattggaaattgtgaaa
ctggaggaagctgacaatttggaggatagttctgttctacaatgtcaccaagtgggtacc
ctaatccgtggaggcaaaggtcgagtcgtaggactagccacagaccttggtcagaccgtg
ttagcttgttatggaactgattcgttactagaattgttcgcgttttgttctgatgacgaa
gctaaagtgagaaaggaaaaaagggttaagaaacaaagaaaaaaattagcgaaattaaaa
gaatctggtgaggtagatccggaggctaccgaagtgccagagttgctcactctgactgat
gaagtgaggcggctatcgtcagtaaagcttggtgctaagttgaagtcaacaacactattg
cttggcacgtctggtgaagtgcgtgttggtgttactctcgccaacaacactgttgagttg
cacagcctgaacatagctgatggcagtgaagtcaaatgcctaaagcagatatcacagcct
ggccatcaaaaggagccgcggtgtatagcaatcagttcagataacttggccatactatct
gcctctgcagactcaattaaattgtggaacagagcgaaccagtcgtgcctccgcacgatc
ccggtggcgggcgggcggccgagcagcgtgtgcttcctgcccggcgaccggcacgcgctg
gcgggctgcagcgacggcgcgctgctgctgctggacgtggcggccgcgcgcacgctcgag
cacgtgcccgcgcactccgccgactgctgctccgtcggactcacgccggatatgagaggt
tgtttctccggcggcgccgataagacagtgaaattatggcaatttgaattaatagatgat
ccgacgggagaatcaaaagcaaaggtattgtcattacttcatacaagaacattggagcta
gaggaacaggtgctggctgtgaaaataagtccaaacagcaagttcattgctgtggcgcta
ctggattctacggttaaaatattcttcctcgatacatttaagttctacctgtccctctac
ggccacaagctgccagtactatgtttggacatcagctacgactctaatataatagcgacc
ggttctgccgaccgcaacgtcaagatatggggcatggacttcggcgactgtcacaagtcg
atcttcgcgcacaacgactccgtgacgtcactgcagttcgtgccgagcacgcattatttt
ttcacctcgtcgaaggatggcaagataaagcaatgggacgctgatacttatgagaatatt
attactttgaatggccacgcgggcgcgagtcacggcgtgtgcgtgggcgcgggcgggctg
cacgccgcctcggccggcgccgacgccgcgctgcgcctgtactcgcgcaccgacgagccg
ctcgtgctcggcgacaccgacgagcaggaggagggactcgccaccggcgatacacacgcc
ccggtaccaggtctacctggcttagtaatgccgactaagaaaaccatcggagcggaaaag
gcggcggactcgataatggagtgcctgcaagtgggcgcggagtacaaacgcgagctggcg
gaggcgaggggccgcgccgtgcagcctccgctattgatggctgcctacaactgcaccacg
ccagaggacttcttcgtcgaagttatcaaaagagtgcgatctagtgagctagaagaagcg
ctgctgctggtcccgttcagcgcggcgtgcgagatggtgcgcatgctgccggcgctgctg
gagcgcggcgacgtggcggagctggcgagccgcgccgcgctgctgctgctgcgtctgcac
cacgcgccgctcgtcgccaaccgcggcctgctcaagcacctcatacagatacaggccaag
gcggcgctcaagctcaacgaactccgggacatggtggggtacaacgtgcacgcgctgggc
tggatgcggcgcgagttggaggcggctgagagcgagcagctgttccgagaggcgaccact
gcgcgacgcaataaagacaagcggcgacgcgcgagacaggctctcaagagacccatcgtt
accatcacttga
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