KEGG   Manduca sexta (tobacco hornworm): 115440971
Entry
115440971         CDS       T07401                                 
Name
(RefSeq) LOW QUALITY PROTEIN: MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
msex  Manduca sexta (tobacco hornworm)
Brite
KEGG Orthology (KO) [BR:msex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:msex03036]
    115440971
   03400 DNA repair and recombination proteins [BR:msex03400]
    115440971
Chromosome and associated proteins [BR:msex03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    115440971
DNA repair and recombination proteins [BR:msex03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     115440971
SSDB
Motif
Pfam: MMS19_N MMS19_C
Other DBs
NCBI-GeneID: 115440971
NCBI-ProteinID: XP_030021376
LinkDB
Position
19:complement(3768462..3777150)
AA seq 967 aa
MDQVWFTSRLSEAITNDEIKFDDTRNIATDIVSGHLEIQNLVGNMEGVLTNTDVENREKG
MIFFTKVLKELPKTLLSEMQLQFISKFYIDRLKDNHRIIPAVIEGYLAIVAMKNYKIQWS
SEFFTVLFKEVSCQSQVRQDRHNIYNILYQVMKKDIEYVKSLGPDFVYGVISSIEGERDP
RNLMFLFSILPTFIKNVPLGHLVEEMFEVIACYFPVDFHPTSEDPTAVTRNDLANALYPC
LCATGEFGEPCMLLLIEKLESSLRVAKLDAYKLLAASCKIFNAQVYFPFLKRLWSTIHTD
VMQKTDDEMRMGALDALSSLIVVQATQANTGQEFENFLKGIIITMQREIADATTLGHFTH
ATKVLITASNATKESCIIITKIMVPAGIAYTEYRVTDKLQMASLEFLADLYGIVKNWDVL
DSIGDHIYEIPGLCLKAVSLTQKDFQIVGLKTLLKVKDLLKSDLVLPFVEILVSFIQHSR
DDDVLKLSIKTINVIARKYPEMIMDYVVRGKFDVNNLTEDKATLQKRARLLSNLASIDDF
TKVILEEMLKXIVSNDEDACQVVEALSESILDKQLYPENKVVEIESDHGLIDKVINWLYT
EQDLHNRVSEDGFILVNRLVANLPADKQKDVVDRHTQRAIAKCAECANYFYLIEALYGSL
RQGVSGSYTKGIVRLSTTLALNVDDEKVRYSAASLLAQMLNKADFGEPFEVVYEMLNSKL
EMEVGVSDRLLMLYAWVTKALVMRGSVMYTEWFQKITQFMNNPNHSKDVANAVKLIMSDS
THILTASQHCRVSPVYKQRVFVEFFKFSQSIGELDASVKEDYYLAWAYILEQTPRSAFIG
ELDKIARIIIDSVIYNNKHLLIIMIGLLIHLVDIKNASVVDSMQSLLPRLTALAQYEGSM
DVRIMSLRFLAHVANTYPTSVILPYKQDMLIGLAPALDDKKRLVRDVAVKARTRWFMVGA
PGEAKEN
NT seq 2904 nt   +upstreamnt  +downstreamnt
atggatcaagtttggttcacttcccggttgtcggaggctatcacaaatgatgaaattaaa
ttcgacgatacacgcaatatcgccacagacatagtgtccggccacttagaaatccaaaat
ctagttggtaacatggaaggagtcttgacaaacacagatgtagaaaaccgtgaaaaagga
atgatattttttacaaaagtccttaaagagttaccgaagactctcttatcagaaatgcag
ttacaattcatatcaaaattttacatagatcggttaaaagacaatcaccgtataatacct
gcagtcatagaaggatatttggctatagtcgcaatgaagaattacaagattcagtggagc
agtgaatttttcacagtactgtttaaggaggtgtcgtgccagtctcaagtaaggcaggat
aggcacaatatttataatattttataccaagtaatgaagaaggatattgaatatgtgaag
tcactgggtccagatttcgtatacggtgttatctcatctatagagggcgaaagggatcct
cgaaatctaatgttcctattttctatattaccaacttttataaagaatgtaccattggga
catttagttgaagaaatgttcgaagttattgcctgttactttcctgttgactttcatccc
acttcagaagatcctactgcggtcactagaaatgacttggcgaatgcgttgtatccttgt
ctatgtgccacaggggagtttggagagccatgtatgcttttgttgatcgaaaagctggaa
tctagtttgcgtgtagctaagcttgatgcgtataagttgttggcggcatcttgcaaaata
ttcaacgcccaagtatactttccattccttaaaaggttgtggtctacgattcacacagat
gtaatgcagaagacagacgatgagatgagaatgggtgctcttgacgcactctcaagcctc
attgttgttcaagcgactcaagcaaacactggccaagaatttgagaacttcctcaaaggg
ataataataacaatgcaaagagagatagctgatgctacaacattaggccattttacacac
gcaaccaaagtgttgatcacagcttcaaacgcgacaaaagaatcttgtatcataatcaca
aagattatggtgccagcaggtattgcttacaccgaatatagagtgacagacaaactccaa
atggcaagcttagaatttctggcggatttgtatggaatagttaaaaactgggatgttcta
gatagcattggtgatcatatttacgaaataccaggactatgtctgaaagccgtgagttta
acgcagaaagattttcaaattgtgggactcaaaacattgttaaaagtgaaggatctattg
aaatctgatttggtgttgccgtttgtggaaattcttgttagtttcattcagcattctcgg
gatgatgacgtgcttaaattgagtataaaaacaattaatgtaatagctaggaagtatcct
gaaatgatcatggattatgtggtcagaggcaaatttgatgtaaacaatttgacagaagac
aaagctactttgcagaaacgtgctcgactgctctcaaatttagctagcatcgacgatttc
actaaagtaatacttgaagagatgttaaaantgattgtttcgaacgatgaagacgcttgt
caagtcgtagaggctctgagcgaaagtattttagataagcaattgtatccagaaaataaa
gtagttgaaatcgaaagtgatcacgggcttatagacaaagtaatcaactggttgtataca
gaacaagatctacacaatcgtgtttcagaagacggttttatattagttaatagattagta
gcgaatttaccagcagataaacaaaaagatgtagttgatagacatactcaaagggctata
gcaaaatgtgctgaatgtgcaaattatttttatctaatagaggcattgtatggttcctta
agacaaggcgttagtggaagttatactaaaggtatagtacgtctttccacaactctagct
cttaatgttgatgatgaaaaagtgagatacagtgcagcaagcctattggctcagatgttg
aataaagccgattttggagagccgtttgaagttgtttatgagatgttgaatagtaaattg
gagatggaagtgggtgtgtccgatcgtctgttaatgctttacgcgtgggtgacaaaagct
ttggtcatgagaggcagtgtgatgtacacggagtggtttcagaagataacacagttcatg
aacaatccgaaccacagtaaagacgtagctaatgctgttaaactgataatgtcggattca
acacacattctgacggcgagtcagcattgtagggtgagccctgtgtacaaacagagggtg
tttgtggagttctttaagttttcacaaagtataggagaattggatgcgagcgtgaaggag
gattactatttagcttgggcttacattttggaacaaacgcctcggagcgcgtttatcggt
gaattggacaagatcgcaaggataataatagattcagtaatatacaacaataaacaccta
ttgattataatgattggattgttaatacatttggttgacattaaaaatgcatcagttgtc
gatagtatgcagagtttacttccgcgcctcacagctttagcacagtatgaagggtctatg
gatgtacgaataatgagcctacggttcctggcgcatgtggcgaatacgtatccaacgtcc
gtcatcctcccgtacaaacaggacatgctgatcggccttgcgccggcgctggacgacaag
aaacgtctggtacgcgacgtcgcggtaaaggcgcgcaccaggtggttcatggtcggagca
cccggcgaggctaaggagaattaa

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