Manduca sexta (tobacco hornworm): 115441073
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Entry
115441073 CDS
T07401
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03013
Nucleocytoplasmic transport
msex03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115441073
03015 mRNA surveillance pathway
115441073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msex03019
]
115441073
03041 Spliceosome [BR:
msex03041
]
115441073
Messenger RNA biogenesis [BR:
msex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
115441073
Spliceosome [BR:
msex03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
115441073
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
115441073
NCBI-ProteinID:
XP_030021527
LinkDB
All DBs
Position
26:complement(13189271..13196875)
Genome browser
AA seq
933 aa
AA seq
DB search
MMMYTGTSTEQDTRFSDKEKKLMKQMKFGDCLTQQVDMSKVKLDVLKPWITQKITEILKM
EDDVVIEYVTNQLEEKFPCPKKMQINLTGFLNGKNARLFMGELWELLLSAQASETGIPES
FTQQKKEEIKKRMEEQQKDKDKDKDRRRSRTRSRSRRRSRERRRTRSRSRDRSGDRKHRN
GGSPRRSRRRSRDKSSPPKTSQVDEVKASEPKENGKSPEKKEEPEVKVVNVSNIDDDVKE
EVKETSMKEDKPDGGEGRKSRSASPVKPTGEKAAEEKEIDKPRRSSSDRRSTSVSSRGSI
KKRSSHKKRQYRSNRDSSTSVSPRRSSRRERSKSRRRSSRRRSLDRRERERERERERERE
RERERRRRERERRERSRERRRSLERRRRSRSRSRRRTRDRSRDRRRSRSRKRSRSRRRSD
RRSRDRRSRERRSRDRRSRERSRERRSRDRKSRDRRSTELIKERLEKSVSIPRKENIEKI
RKKSSERVSSVPREQSKERVISSSSRESSVANNKPVAQTENQAKQNQLSDQEDKEDIIPI
PTLREYSKSLSRTPSPFLRKHEMESNKKSDRSGDDISEKEQNDEEAKTKDSKKGKRKAHQ
SESDSESSEEVSKSKSKAKLKRKEKTTSKRGKKPKKESSSSESDSDDSSSSDSEEDRKKK
NKKNAKKKLAKKSKKKRTRSSSSDSSSEEEVKHKSSKSKQKSIPEESDSEKRSKKRVKDV
STERIKSDKPDIKGTKLKKVDNSEESHGESSDTDEKSAKKKSIKRDSSSSEKEVRRGKKL
EGSKDKPLSPDLGKSRKVEEKVSKTKPIEELKVKSRDDSDKKAKKREKEESSSDSDQVSK
KKARKKVTDSESDSDSDEPKKSKKAKKHKKHSKKHKKHKKHKKSSKKKDDSSESEEVEEE
DEEGKVNNEDLEKKLRERALKSMKKQTSVSGSD
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgtacacggggaccagtaccgagcaagatacccgcttcagcgacaaggagaag
aagctcatgaagcaaatgaagtttggagattgtttaacacaacaggtggatatgtccaag
gtaaagctggatgtactgaagccatggatcactcagaaaattacagaaatcctcaagatg
gaagacgatgttgtcattgaatatgtcaccaaccaacttgaggagaagttcccttgtcca
aagaaaatgcagatcaaccttactgggttcctgaacgggaagaacgcgcggctcttcatg
ggcgagctgtgggaactgctgctgagcgcgcaggcaagcgagacaggcatacccgagtca
ttcacccagcaaaagaaagaagaaattaaaaagagaatggaagagcagcagaaggataaa
gacaaagataaagatcgtcgaagatcccggacgcggtcacggtctcgtcgtagatcgcga
gagcggcgtcggacgcggtctcgttcacgcgaccgttcgggcgacaggaaacatcgcaac
ggaggcagtccacggcggtcgaggaggcgcagcagggataagagcagcccgccgaaaact
tcacaagtagacgaggtcaaggcatcagagccgaaagagaatggaaaatctccggagaag
aaagaagaacctgaagtaaaggttgttaatgtcagtaatattgatgatgacgtcaaagaa
gaagtaaaggagacttctatgaaggaggataaacctgatggaggcgaaggtcgtaagtcc
agatcagcatcgccggttaaaccgacaggtgaaaaagctgctgaagaaaaagaaatcgac
aaaccacgtcgttcctcaagtgacaggcgctcgacatcggtgtcttcaaggggaagtatc
aagaagagatcttctcataagaaacgtcaataccgttccaatcgggactcgtctactagc
gtgagcccgaggcgcagttctcgccgggagaggagcaagtctcgtcgccgtagcagtcgc
aggaggtcgctggatcgtcgcgagagagaaagggaacgtgaaagggagagggagagggaa
cgcgaaagagaacgacgacggcgtgaaagggaaaggagggagaggtcacgtgaacgtcgg
cgatcacttgaaagacgtcgaagatcgcgatctcgttcgcgcaggcgcactagagacaga
tcccgcgatcgtcgccgttcgcgctcgcgcaagcgttcgcgttctcgacgtcgttcggac
cgacgttcccgcgaccgtcgctcccgtgaacggcgctctagggaccgtcgttccagagaa
aggtctagagaaagaagatctcgtgacagaaaatctcgcgacagaagatcgaccgaactc
attaaggagcgattagagaagtctgtctctattcctcgaaaagaaaacatagaaaagatc
cggaagaagtcctccgaacgtgtatcatctgttcctcgagaacagtcgaaagaacgtgtc
atatctagttccagcagagaatcttcagtggcgaataataaaccagtggctcaaactgaa
aaccaagctaaacaaaatcaattatcagaccaagaagataaagaagatattatacctata
cctactttgcgcgaatattctaagagtttatctcgcaccccatctccattcttaagaaaa
catgagatggagagtaataaaaaatctgatagatctggtgatgatatatcagaaaaagag
cagaatgatgaagaagcaaaaacaaaagatagtaaaaagggcaaacgtaaagctcaccaa
tcggaatctgatagtgaaagcagtgaagaggtctctaaatctaagagtaaagcaaagtta
aaacgtaaagagaagacaacatcaaaaagaggaaagaaaccaaaaaaagagagttcatca
agtgaaagtgattcagatgattcatcatcaagtgactcagaggaagacagaaaaaagaag
aataaaaagaatgccaaaaagaagctggccaagaagtctaaaaagaaaaggacacgttca
tcgagttcagactctagttcggaagaagaagttaaacataaaagttcaaagtcaaaacaa
aagagcattccagaagagtctgattctgaaaaaagatctaaaaagcgtgttaaagatgtt
agtaccgaacgcattaagtcggataaacctgatattaaaggaaccaaattgaaaaaagta
gacaattctgaagaatcacacggcgaaagttctgatactgacgaaaaatctgctaaaaag
aagtccataaaacgtgattcgtctagttccgaaaaagaagttagacgtggaaaaaaactt
gagggatctaaagacaaaccgttgtcgccggatttaggtaaatcaagaaaagtggaagaa
aaagtctctaaaacaaagcctattgaagaactaaaagtcaaatcccgggacgatagtgac
aagaaagctaagaagcgagaaaaggaagaatcttcttcagatagtgaccaagtgtctaaa
aagaaagcaaggaagaaagtcaccgattccgagtctgattctgacagtgatgaacctaaa
aagtcgaagaaagctaagaagcataagaaacattctaagaaacataaaaaacacaagaaa
cataagaagtcatctaaaaaaaaggatgattcttccgaaagcgaggaagtcgaggaagag
gacgaggaaggaaaggtgaacaatgaagacttggaaaaaaaattacgtgaaagagcgttg
aagtctatgaaaaaacagacaagtgtttcagggtcggattag
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