Manduca sexta (tobacco hornworm): 115441220
Help
Entry
115441220 CDS
T07401
Name
(RefSeq) calsyntenin-1
KO
K22659
calsyntenin 1
Organism
msex
Manduca sexta (tobacco hornworm)
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
msex04515
]
115441220
Cell adhesion molecules [BR:
msex04515
]
Cadherins
Cadherin related
115441220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_2
Laminin_G_3
Glyco_hydro_16
Motif
Other DBs
NCBI-GeneID:
115441220
NCBI-ProteinID:
XP_037295297
LinkDB
All DBs
Position
3:2954725..3147559
Genome browser
AA seq
956 aa
AA seq
DB search
MIVRFLSVLCVGVLVASVHGAEGNNDNEDVPYLELAEPEEGYHGLIRENETLVEVTPPIR
ARGPLCSFLILNNKHHGEAPFEIMVIDENEARLRVRYPLNCEKRRNYKFDIAAVGCDGSY
SNTVPVHITVMDVNEYPPVFGQASYVKAVDEGRIYEEILRVDATDKDCTPRYGDVCKYEI
ITDKSQPFAINDDGVIRNTEPLDYEKSHNHILSVVAYDCGMMQSAPVMVTIKVNKPCRPG
WKGVAERVDYAPGSGPLALFPAARLETCQSDERCPGVTRIQAAVTLQASRAGTGCDRDTY
SLHAQRTICGLDPKTIDLLPSPGAGNEWTKSLKPDSGRDGEQMFEFDGETTSAVVPESVL
GHSLSGTFGVSTWMRHAPPADGDKHKKEHVLCLADDHKMNRHHYALFVRNCRLILLLRRD
FGEGDLNIFRPAEWRWKLPEVCDNEWHHYAVNVRFPNVELYVDGELYRAPDGKGPEVIDD
WPLHPAHGINTTLVVGACWQGTESETKHGLVGWLAGLGVVRGAVQAARALACVARCREGL
SLAPELYLRAVSVQADGVADVETLLRRVAYGDARAFPTPGRRNVHLDTTVTCDNGRVLKA
RPAEAYVMVLAPQTPSILLNGSAEVSRDYAHFRAGLPVFPDLDVRVSSAPDAPPLDEESQ
KLDSCVVSVYPALNPDHEALSLAGAGSLPLRYDIRAAVTRDGVILTGADTVHNYRQVLRE
IEYSNKKPAYYLNRVFKLTCSELNGRFTSNEYVQTLTVVHPHMAGGGEAGLSRELHPSGM
ADKADVARDSQWEGGARRVVQPRAFAAHAQRDMHAADMPAPRLHDIHAQHPANNHVALVI
GVVSCGALVCVGALALVRARAARRPCVSRAPPAARARALRADPEMTWDDSALTITVNPMD
EAPPTCGTNANAADSSEDSSDSEFGWHSSDDEEEPTPDKQHKYRNISQLEWDNSTM
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgagattcttaagcgttctgtgcgtcggagttttggtggcttcggtgcacggc
gctgagggaaacaacgacaatgaagacgtcccgtacctggagctggctgagccggaggag
ggctaccatgggctgatccgcgagaacgagaccttggtagaggtgacgccgccgatccgc
gcgcgcggaccgctctgctcgttcctcatactcaacaacaagcaccatggggaggcgcct
ttcgagatcatggtaatagacgagaacgaagcgcgtctgcgcgtgcgctaccctctcaac
tgcgagaaacgacgcaactataagttcgacatcgccgccgtcggctgcgacggatcatat
tctaacaccgtgccagtccacatcacagtcatggacgtgaacgaatatccgccagtcttc
ggccaggcgtcatacgtgaaggcggtggacgaggggcgcatatacgaggagatcctgcgc
gtcgacgccactgacaaggactgcacgccgcgctacggcgacgtgtgcaaatacgagatc
atcacggacaagagccagcccttcgccattaatgacgacggagtgatccgcaacacggag
cccctggactacgagaagtcccacaaccacatcctgtcggtagtggcatacgactgcggc
atgatgcaatcggcgcccgtgatggtcaccatcaaggtcaacaagccctgcaggccggga
tggaaaggcgtggccgagcgcgtggactacgcccctggctccggccccctggctctgttc
cctgcagcgcggctggagacctgccagtcggacgagcggtgtcccggcgtgacacgcatc
caggcggccgtcacgctgcaggcgtcacgcgccggcaccggctgcgaccgcgatacttac
tcgctgcacgcgcagaggactatctgtggattggacccgaagaccatcgacctgctgccg
agcccaggagccggcaacgaatggaccaagtccttgaaacctgactccggtcgtgacggc
gagcagatgttcgagttcgacggcgagacgacgtcggcggtggtgccggagagcgtgctc
ggccactcgctgtcgggcaccttcggcgtctccacgtggatgcgccacgcgccgcccgcc
gacggagacaagcacaagaaggagcacgtgctgtgtctcgcggatgaccacaaaatgaac
cgccaccactacgcgctgttcgtgcgcaactgccggctgatcctgctgctgcgccgcgac
ttcggcgagggagacctcaacatattccgaccggccgagtggcgctggaagctgcccgag
gtgtgcgacaacgaatggcatcactacgcggtgaacgtgcggttcccgaacgtggaactg
tacgtggacggcgagctgtaccgcgcgcccgacggcaagggacccgaggtcatcgacgac
tggccgctccaccccgcgcacggcatcaacaccacgctcgtcgtcggcgcctgctggcaa
ggcacggagagcgagacgaagcacgggctggtggggtggctggcggggctgggcgtggtg
cgcggcgcggtgcaggcggcgcgcgcgctggcgtgcgtggcgcgctgtcgcgaggggctg
agcctggcgcccgagctgtacctgcgcgccgtgtccgtgcaggccgacggcgtggccgac
gtggagacgctgctgcgccgcgtggcgtacggcgacgcgcgcgccttccccacgcccggc
cgccgcaacgtgcacctcgacaccaccgtcacgtgcgacaacggccgcgtgctgaaggcg
cgcccggccgaggcctacgtcatggtgctggcgccgcagacgcccagcatcctgctcaac
ggcagcgccgaggtgtcgcgcgactacgcgcacttccgcgccggcctgcccgtgttcccc
gacctcgacgtcagggtctcctccgcgcccgacgcgccgccgctcgacgaagagagccag
aagctggactcgtgcgtggtgtcggtgtacccggcgctgaaccccgaccacgaggcgctg
tcgctggcgggcgcgggctcgctgccgctgcgctacgacatccgcgccgccgtcacccgc
gacggcgtcatcctcaccggcgccgacaccgtgcacaactaccgacaggtgctgcgcgag
atcgagtacagcaacaagaagccggcgtactacctgaaccgcgtgttcaaactgacctgc
tccgagctcaacggacgcttcaccagcaatgaatacgtgcagacgctgacggtggtgcac
ccgcacatggcgggcggcggcgaggcggggctctcccgcgagctgcaccccagcggcatg
gccgacaaggcagacgtcgcacgcgactcacagtgggagggtggcgcgcgtcgtgtggtg
cagccgcgcgccttcgcggcgcatgcgcagcgcgacatgcacgctgccgacatgcctgcg
ccacgtcttcacgatatacacgcgcagcaccctgccaacaaccacgtggcgctggtgatc
ggcgtggtgtcgtgcggcgcgctggtgtgcgtgggcgcgctggcgctggtgcgcgcgcgc
gcggcgcggcgcccgtgcgtgtcgcgcgcgccgcccgccgcccgcgcgcgcgcccttcgc
gccgaccccgagatgacctgggacgactccgcgctcaccatcaccgtcaaccccatggat
gaggccccgccgacatgcggcactaacgcgaacgcggcggacagctcggaggacagctcc
gactcggaattcggctggcattcgtccgacgacgaagaagaaccgacaccggacaagcag
cacaagtacagaaacatcagccagctggagtgggacaacagcacgatgtaa
DBGET
integrated database retrieval system
