Manduca sexta (tobacco hornworm): 115441838
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Entry
115441838 CDS
T07401
Name
(RefSeq) short transient receptor potential channel 4
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex04745
Phototransduction - fly
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09150 Organismal Systems
09157 Sensory system
04745 Phototransduction - fly
115441838
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
msex04040
]
115441838
Ion channels [BR:
msex04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
115441838
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_5
DUF6350
Motif
Other DBs
NCBI-GeneID:
115441838
NCBI-ProteinID:
XP_037300333
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Position
28:6703844..6715697
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AA seq
868 aa
AA seq
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MEHREKNKSSRSNVTDSIENYSLPNSPIQEQEYINNTSLISAKSERKSMKIEENSNFVEE
ACSCCKESTTSTSNILEHKLHNVVENRADRFAKSTGCLLHYLKKEQCELTRPSQGKTMRF
DSKTYFVKHRKSDDKVTEDYANKNIKHQRVYLPKLQPSEAEYIRLVSENSVAAVKKYIED
HPELNINCTNFQGVSALHVSVQKRFEDMVEFLLKFTNIEIGDTALQAVRDNSIKILEMLL
NALKKVSPGLEFGGAAHSTEFPLHVTPIILAAQLGRYEIIGMLLARGHTILRPHFPKCPC
IACKNSFVTEDPLYTSSARLSVYRAISSPAYLVHTSCDPVLSAFLLAIELTDNAAASRHL
ASAYMKLRDNVRIFAVDLIGCCRTSEEVELMLKQTSGCGGRRHFVLPRLLMAVNYKQKEF
VAHPNTQQVLESYWLGNWYSWKRKSSYSKACVILSRVFLIPFILVMCMVAPRHRLVKHWQ
IPLNKLITHATAYFVFLALVFYVSNQDKSGQKRGPPSTGAEGPLILFVCGYTWSAIRMCY
IQGSRRYFTVIWHWAEAIMLILFGLTFAFWIISAVDIAENDEEDLDRKYWNQYDPTLLAE
GTFCLATIFAYFRLMFLCQLNYHLGPLQVSLGKMTIDIYKYIIVFAIIISAFAAGLSRFY
QYYEGMVYEDEFGMKTMQVSSFTSLTDTLNTLFWALFCMAPLESADVVIENTRDETSTLK
YRENRHGYTERIGYFCFGCFEVISVIVVLNMLIATMSNTFQRVTDNAAIEWTFGRTEMYL
DYMSQTTLPSPFNMIPTASGMANITDWFKNKCCKRNTELDEEASTRKEYPALMSVLIQRY
FRIKEIQHHNNSNVILGQTKFKLQRSTV
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggaacatagagaaaagaataaatcatcaagatctaatgttactgattcaatagaaaac
tatagtttaccaaacagtccaatacaagaacaagagtatatcaataacacgagtttaata
tccgctaaaagcgagcgtaaatctatgaagatagaagaaaactctaactttgtagaagaa
gcttgtagctgttgtaaagagtctactacttcaacgtcaaatatactagaacataaatta
cataatgtagttgaaaatcgtgcagatagattcgcaaaatcaactggttgtctcttacat
tatctcaaaaaggaacaatgtgaactaaccagaccatctcaaggaaaaacaatgcgattt
gatagtaaaacatactttgtgaaacacaggaagtctgatgataaggtaacagaagattat
gcaaacaaaaatataaaacatcaacgtgtatatttacccaaactacaacctagtgaagct
gaatatatacgtttagtgtctgaaaatagtgtagccgctgtaaagaaatatatagaagac
catcccgagcttaatattaattgcacaaattttcagggcgtgtcagcgctacacgtttcc
gtccaaaagagatttgaagatatggtggaatttctcttaaaatttacaaatatagaaatt
ggtgacaccgccttgcaagccgtacgagataacagtattaaaatattggaaatgttactg
aacgcgctaaagaaagtgtctccaggattggagttcggtggagctgctcactcaacagaa
tttcctttgcatgtaacacctataatattggctgcccagttaggccgatatgaaatcatt
ggaatgctattggcacgaggtcacacaattttacgaccgcatttccccaaatgcccatgt
attgcttgcaagaattctttcgtgacagaagacccactttacaccagcagtgcaaggctc
tcagtgtatagagcgatatcttcccctgcatacttggttcatacaagttgtgatcccgtg
ctatctgcttttcttttggcgatagaactaactgataatgcagcggcgtctagacatctc
gcatctgcgtatatgaagctaagagacaatgttaggatatttgctgtagatcttataggt
tgttgccgcacgtcggaagaagtcgaattgatgttaaagcaaacgtcagggtgtggcgga
cgacgtcattttgtactaccgcggcttctaatggccgtcaattataaacagaaggagttc
gtcgcgcacccgaacacacagcaggtcttggagtcgtactggctaggtaactggtacagc
tggaaaagaaaatcttcttactctaaagcatgcgtcattttaagtcgagtttttcttata
ccgtttattctcgtcatgtgtatggtagctccacgacaccgtctcgtgaaacactggcag
ataccgttgaacaaactgattacacatgcgaccgcgtacttcgtgttccttgccctcgtc
ttctatgtttctaatcaagataagagtggacaaaagcgcgggccgccgagcacaggcgca
gaaggtccgctaatcttattcgtatgcggctacacgtggtctgcaattcgtatgtgctat
atccaggggtctcggcgatattttactgtaatatggcactgggctgaagcgataatgctc
atactgttcggattaacatttgccttttggattatatcagccgtcgacattgccgaaaac
gacgaagaggatttagatcgtaaatactggaatcaatacgacccaacacttctggccgag
ggaacattttgcttggcaactatatttgcatatttccgactgatgtttttatgccaacta
aattaccatctaggaccacttcaggtgtctttaggaaaaatgacgatagatatttacaaa
tacataatagtgtttgcgataataataagtgcttttgctgcgggcctttcacgattctac
cagtattacgaaggtatggtttacgaagacgaatttggaatgaaaacaatgcaggtatca
tcgttcacaagcttgacagatacactaaataccttattttgggctcttttttgcatggcg
cctctcgaaagtgccgatgtagtaatagaaaatactagagatgaaactagcaccctaaag
tatcgtgagaatagacacgggtatacagagaggatcggatatttttgctttggctgtttc
gaggttatctccgtgatcgtggtgctgaacatgctcatagcgacgatgtccaacacgttc
cagcgcgtcacagacaacgcggccatagaatggacgttcggaaggacagaaatgtaccta
gactacatgtcgcaaacaactctaccgtcgccgttcaacatgatacccacggcttcggga
atggccaacattacagactggttcaagaataaatgttgtaaacgtaatacggagcttgat
gaagaagcaagtactcgaaaagaataccctgctttaatgtctgttctaattcagagatat
ttcagaatcaaagaaattcagcaccacaataattcaaacgttattttggggcagacaaag
tttaaattacaaagatctactgtataa
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