Manduca sexta (tobacco hornworm): 115441935
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Entry
115441935 CDS
T07401
Name
(RefSeq) X-ray repair cross-complementing protein 5 isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
115441935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msex03400
]
115441935
DNA repair and recombination proteins [BR:
msex03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
115441935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
Meiotic_rec114
Motif
Other DBs
NCBI-GeneID:
115441935
NCBI-ProteinID:
XP_037293191
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Position
10:complement(10833481..10837355)
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AA seq
704 aa
AA seq
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MVKKIDTGLIIIWDVGKNVAEEDEKNKKSFFEQSRECVARIIERKILTQGKDHLGIILLG
AKETNNNMANQCEGVFRNIHTFFPLQPPMWQMIRNLPKSASNKSGDWVEALAVAVDHVVE
VKDFNFTNIKIILLTNFMKPTRSKKNIQMILDGIKDEKKIEVDVIGPDLYDTTNNSPDLE
WAREFVKETNGVAETIESTMNFLLFHKKKTTKPQPWNVDLTIGPYIKIPVTAYIRLNDDK
IVEKWTKTIKDPVTSKSSSTTAVVRDKGYYDAEKQAKVDESEVTKAHEFGGQTVPSSESD
KFLQYQPGDKSLSLYGFTNANNIHWQHFDGKGLHYVFERKGDKKAQLAIKCLIEILHENK
LVGVVRKVHNNNNAPKMFALMPVIDTNNYMCLSMVSLCYKEAIKYMPFPPTNIRKYSCTK
DQVDAFKYLIRTMDLTNSYDDTFDDAEAFPAGETVSPSAQYLLDCIAYRALNPEKPLPQP
RDEIMDLFKIPPMVEKRCQDAQEKIKKLFPLKKVEEKPKRRTKRLLYLNTSNDPSTIGKP
HDNTNNSGPKIALPKADDSDYTIGTINPVRDFSALLGKGKSLVDLAPDMTEVIESLLYYN
LDGVYTKAITTMTHFRGECVKTDPSIYNNWLLKFKVDLSNRNRGDLLTLIKEKGVDFILK
SENNLSTFEKTDSHEESQLYEMDTVPESTEVAIKPEVYDMFDDI
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaaaaattgatacgggtcttattatcatttgggatgtgggaaagaatgtggcg
gaagaagatgaaaaaaataagaaatcattttttgagcaatcacgagagtgtgttgcaaga
attatcgaacgcaaaatattgacccaagggaaagaccaccttggtatcatattgctgggt
gcaaaggaaactaataacaatatggcaaaccaatgtgagggtgttttccggaacattcat
acatttttcccactccagccaccaatgtggcaaatgataaggaatttgccgaagtctgca
agcaataaaagtggtgactgggtggaggctcttgcagtagcagtggaccatgtcgttgaa
gtcaaagatttcaacttcaccaatataaaaataatactgttaacaaactttatgaaacct
actcgcagcaaaaaaaatattcaaatgattctagatggtatcaaagatgaaaagaagatt
gaagttgatgtaattggtccagatctttatgacacaactaataatagcccagacctagaa
tgggctagagaatttgttaaagaaactaatggtgtagcagaaactattgaaagcaccatg
aatttccttttatttcacaaaaagaaaaccaccaaaccacaaccttggaatgtagaccta
accataggtccatacatcaagataccagtcacagcatacatcagactgaatgatgacaaa
attgttgaaaaatggaccaaaactatcaaagatcctgttacatcaaagtcaagcagcaca
acagctgtagttcgggacaagggttattatgatgctgaaaaacaagctaaagttgatgag
tctgaagtaactaaagctcatgaatttggaggccaaacagttccatcatcagaatctgat
aaattcctgcaataccaaccaggagataaatcattgtcactgtatggatttacgaatgca
aataatatacattggcaacactttgatgggaagggtttgcattatgtgtttgaaagaaaa
ggggataaaaaagcccaactagcaattaaatgcttaattgagattcttcatgaaaataaa
ttggtgggtgttgtcagaaaagttcataacaataacaatgcaccaaaaatgtttgctctc
atgcctgtcattgatacaaataattacatgtgtttatcaatggtttctctatgttataaa
gaggccataaagtacatgccatttcctccaacaaatatcaggaaatactcttgtacgaag
gaccaagtagatgctttcaaatatcttatcagaacaatggacttgactaactcatatgat
gatacttttgatgatgctgaagcattccctgctggtgaaactgtaagcccaagtgctcaa
tatcttttggattgtattgcttatcgtgcacttaatccagagaaacccctgccacagcca
agagatgagattatggatttatttaaaataccaccaatggttgaaaagagatgtcaagat
gcacaggaaaagataaagaaactatttcctttgaaaaaagtggaagaaaaacccaaaagg
aggacgaaacgacttttatatctgaatacttcaaatgacccttccactattgggaagccg
catgataatacaaataattctggacctaaaattgcacttccaaaagcagatgattcagat
tacaccatcggcaccattaaccctgtgagggatttctcagctttactggggaaagggaaa
tctttagttgatctcgctccagatatgactgaagtaattgaaagtcttctgtactataat
ttagatggggtatacacaaaagctataactaccatgacacatttcagaggagaatgtgtt
aagacagatccatctatttacaacaattggcttctgaagtttaaagttgatttatccaat
cgtaatagaggtgatctgctcacattgataaaggaaaaaggtgttgattttattttgaaa
tcagagaacaatttaagcacttttgaaaaaacagatagtcatgaggaaagtcaattatat
gaaatggatactgttccagagtcaactgaagtagctatcaaaccagaagtttatgatatg
tttgatgatatctaa
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