KEGG   Manduca sexta (tobacco hornworm): 115442302
Entry
115442302         CDS       T07401                                 
Name
(RefSeq) WD repeat-containing protein 48 homolog
  KO
K15361  WD repeat-containing protein 48
Organism
msex  Manduca sexta (tobacco hornworm)
Pathway
msex03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:msex00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    115442302
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msex03400]
    115442302
DNA repair and recombination proteins [BR:msex03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     115442302
SSDB
Motif
Pfam: WD40_Prp19 WD40 DUF3337 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_EML Beta-prop_SCAP Beta-prop_TEP1_C NBCH_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_DCAF12 Beta-prop_RIG_2nd WD_LRWD1 Beta-prop_SPT8 WDR54 Beta-prop_NUP159_NUP214 Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_HPS5 Nucleoporin_N Beta-prop_WDR19_1st Beta-prop_Nup120_160 Ge1_WD40 RAWUL Beta-prop_VPS8
Other DBs
NCBI-GeneID: 115442302
NCBI-ProteinID: XP_030023175
LinkDB
Position
5:4167184..4173791
AA seq 651 aa
MGTTMRKKTQVSFVIRDEEERRHKNGVSSLQLDPIAGRLYSAGRDGIIRVWHTGTGSQDR
YVQSMEHHTDWVNDIVLCCGGKNLISASSDTTVKVWNAPKGFCMSTLRTHKDYVRTLAYA
KDKEQVASAGLDRAIFLWDVNTLTALTASNNTVTTSSLVGNKESIYSLAMNPPGTILVSG
STEKVLRVWDPRNCSRLMKLKGHADNVKALVISRDGTQCVSGSSDGTIKLWSLSQQRCVS
TIRVHSEAVWAILATDNFSHIISGGRDRLVIITELRNPDNFMIVCEETAPILKLCFTADQ
QAVWVSTSESDVRCWKLPPLSSLSSEAYSTTNYNTNNVYQTQPMYNIPGGPAIKHYTVLN
DKRHVLTKDTASNVALYDVLKASKLEDLGQVDYEEEVKKRFKMVYVPNWFNVDLKTGMLT
IHLGQDETDCLSAWVSAKEAGLTTENDQKVNFGALLLQALLEHWNHPNRVNEAGQKVVGN
SFFSVPVHTPLIFSEVGGRTLYRLQVGDAGGETEGNLLGETVPSWVVDVAVEMSAPKLNK
LPFYLLPHSTCQSKQDRQKKDRLVANDFIQCRKVAEHVVEKIVGGGDVNGASAGSGKGSA
NDDSGNDAPEERVELLCCDQVLDPNMDLRTVRHFIWKSNVEFTLHYRVLKQ
NT seq 1956 nt   +upstreamnt  +downstreamnt
atgggcaccacgatgcgtaagaaaacacaagtttcgttcgtgatacgcgatgaggaggaa
aggaggcataaaaatggggttagctcactacaattggacccaattgcgggaaggctgtac
tcagccggcagggacggtattatccgggtttggcacacaggaaccggatcccaggatagg
tacgtccaaagcatggaacaccacaccgactgggtgaacgatatagtgctttgctgcggc
ggtaaaaatcttataagtgcttcatccgacaccactgtcaaagtgtggaatgcacccaaa
ggattctgtatgtcaactctacgaactcacaaggactatgtacgtacactagcgtatgct
aaggataaggagcaagtggccagcgcagggctagaccgcgctatatttctctgggatgtg
aatactttgactgcacttactgctagtaataacacagtaactacatcaagtcttgttgga
aacaaagagtctatatacagtttggctatgaatccacctggtactatactggttagcggt
tctacagagaaggtactccgagtttgggatcctcggaattgttcccgacttatgaagtta
aaaggacatgcagataatgtcaaagcgttagttataagccgtgatggcacccagtgtgtc
tctggaagctctgacggaacgataaaactgtggtctctgtcacagcaacgttgcgtatca
acaatcagggtccattcagaagctgtgtgggcgatactagctacagacaacttcagtcac
atcatatcaggtgggagagaccggttggtcatcataacggagttacgtaaccctgataac
ttcatgatagtatgtgaagaaacagctccaatacttaaactatgtttcaccgctgaccag
caagcggtgtgggtatcaacatcggaatcagacgtccgatgctggaaactaccaccgcta
agctcgctatcatcagaggcttacagcactactaattataatacaaataatgtgtaccaa
acacaacccatgtataacattcctggaggcccagctataaaacactatacagtattgaac
gataaacgtcatgtcctcacgaaagacacggctagtaatgtagccctgtatgatgtattg
aaggcaagcaagcttgaagacctaggccaagttgattatgaagaggaagtgaagaaacga
ttcaagatggtgtatgtacctaattggttcaatgtagatttgaagactggaatgctgact
attcacttgggacaggatgagactgactgtttgagcgcgtgggtcagtgcaaaagaagct
ggtttaactactgaaaacgaccagaaagtgaactttggtgcactccttctccaagcatta
ctggagcactggaaccatccaaacagggtcaacgaggccgggcagaaagtggtgggcaac
agtttctttagtgtacctgtgcatactccactcatattcagtgaagtgggcggcagaacg
ctgtacaggctgcaggtgggtgatgcaggcggtgaaactgagggtaatctgctcggcgag
acggtaccctcttgggtggttgacgtggccgtcgagatgtcggcgccgaagctgaacaag
ttgcccttctacctattgccgcattccacttgccagagtaaacaggatagacagaagaag
gaccgtctagtagcaaacgacttcatccaatgccgtaaagtggccgagcacgttgtagag
aagatagtagggggcggtgacgtcaacggtgcgagtgctggcagcgggaagggcagcgcc
aacgatgatagtgggaacgacgcgcccgaagagagggtcgagttgctgtgctgtgatcag
gtccttgacccaaacatggaccttcgcaccgtccgccacttcatatggaagtccaacgtc
gagttcacactacactacagagtgttgaaacaatga

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