KEGG   Manduca sexta (tobacco hornworm): 115442752
Entry
115442752         CDS       T07401                                 
Name
(RefSeq) WD repeat-containing protein 61
  KO
K12602  WD repeat-containing protein 61
Organism
msex  Manduca sexta (tobacco hornworm)
Pathway
msex03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:msex00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    115442752
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msex03019]
    115442752
Messenger RNA biogenesis [BR:msex03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     115442752
SSDB
Motif
Pfam: WD40 WD40_Prp19 WDR55 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_EML NBCH_WD40 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_WDR75_1st eIF2A Beta-prop_Vps41 Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_TEP1_C Ge1_WD40 Beta-prop_NUP159_NUP214 Beta-prop_NWD2_C Beta-prop_IFT140_1st PEP5_VPS11_N Nbas_N Beta-prop_VPS8 Beta-prop_RIG_1st B-prop_COPA_B_2nd Cytochrom_D1 Beta-prop_SCAP KNTC1_N Gmad1 CFAP43_N PROPPIN Beta-prop_LRRK2 DUF2415 Utp8_b_propeller Cu-oxidase
Other DBs
NCBI-GeneID: 115442752
NCBI-ProteinID: XP_030023765
LinkDB
Position
8:4457908..4462453
AA seq 319 aa
MPASTVYSILLKKENAHEDPIYSCAWVKTNPGGDLQNASKEFIVTGGLDCVVKVWSLANN
KLDLVHTLEGHPMAVVSVAVSPDGTTIASTSLDSILILWDLASGKKKLQVQTGAIDAWQV
AFSPDGCNVVTGGHMGKIYVYDVQQGGVDGVLDTRGKFISSVAWSPNNKYIAAGSIDGAV
FTFDTHQCKLLHHIDAHTLAVRSVAFSNKSDLLATASNDGRMKLFDSESGRHLNTLELKG
WVVAVRFSPDGTRIATATTDGVVCVVAIRQLTVLHAFQGHADTVWDIHFNKNSDKLLSVS
KDKCINIYECPIPPPPAKK
NT seq 960 nt   +upstreamnt  +downstreamnt
atgccggctagtactgtgtattctatactgttaaaaaaggaaaatgcccacgaagaccct
atttatagctgtgcctgggtcaaaacaaaccctgggggagatttacagaatgcctcaaaa
gaatttatagtgacaggaggactggattgtgtggtaaaagtgtggtcattggccaacaac
aagttggatctagtccatacattggaagggcatcctatggctgtggtttctgttgcagtc
agccctgatggaactacaattgccagcacatccttagactctattttgatattatgggac
cttgcatctggtaagaagaagcttcaggtacagacaggcgcgatcgacgcgtggcaggtc
gcattctcgcctgacgggtgcaatgtggtcaccggaggtcacatgggcaaaatatatgtg
tatgatgtccaacaaggtggggtggatggtgtgctggacactagagggaagtttatttct
agtgttgcgtggagtcccaataacaagtacatagcggccgggtcgatagatggcgctgtg
tttaccttcgacacgcaccagtgcaagttactgcatcacatcgacgcgcacacgttggcc
gtgaggagtgttgccttttctaataagagtgatcttcttgcaactgcctccaatgatggg
agaatgaagttgtttgattctgagtccggtcgccacttaaacacgttagagctcaaaggc
tgggtggtggcggttcgattcagcccggacggcactcggattgcgaccgccacgaccgac
ggcgttgtgtgcgtggtcgctatacgacagctgactgttcttcacgctttccaaggacat
gcggatacggtatgggatatccatttcaacaaaaatagtgataaactgttatcagtatct
aaagacaaatgcatcaacatttacgaatgtccaataccgccgccgcctgctaaaaagtaa

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