Manduca sexta (tobacco hornworm): 115442752
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Entry
115442752 CDS
T07401
Name
(RefSeq) WD repeat-containing protein 61
KO
K12602
WD repeat-containing protein 61
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115442752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msex03019
]
115442752
Messenger RNA biogenesis [BR:
msex03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
115442752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_EML
NBCH_WD40
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
eIF2A
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_TEP1_C
Ge1_WD40
Beta-prop_NUP159_NUP214
Beta-prop_NWD2_C
Beta-prop_IFT140_1st
PEP5_VPS11_N
Nbas_N
Beta-prop_VPS8
Beta-prop_RIG_1st
B-prop_COPA_B_2nd
Cytochrom_D1
Beta-prop_SCAP
KNTC1_N
Gmad1
CFAP43_N
PROPPIN
Beta-prop_LRRK2
DUF2415
Utp8_b_propeller
Cu-oxidase
Motif
Other DBs
NCBI-GeneID:
115442752
NCBI-ProteinID:
XP_030023765
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All DBs
Position
8:4457908..4462453
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AA seq
319 aa
AA seq
DB search
MPASTVYSILLKKENAHEDPIYSCAWVKTNPGGDLQNASKEFIVTGGLDCVVKVWSLANN
KLDLVHTLEGHPMAVVSVAVSPDGTTIASTSLDSILILWDLASGKKKLQVQTGAIDAWQV
AFSPDGCNVVTGGHMGKIYVYDVQQGGVDGVLDTRGKFISSVAWSPNNKYIAAGSIDGAV
FTFDTHQCKLLHHIDAHTLAVRSVAFSNKSDLLATASNDGRMKLFDSESGRHLNTLELKG
WVVAVRFSPDGTRIATATTDGVVCVVAIRQLTVLHAFQGHADTVWDIHFNKNSDKLLSVS
KDKCINIYECPIPPPPAKK
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgccggctagtactgtgtattctatactgttaaaaaaggaaaatgcccacgaagaccct
atttatagctgtgcctgggtcaaaacaaaccctgggggagatttacagaatgcctcaaaa
gaatttatagtgacaggaggactggattgtgtggtaaaagtgtggtcattggccaacaac
aagttggatctagtccatacattggaagggcatcctatggctgtggtttctgttgcagtc
agccctgatggaactacaattgccagcacatccttagactctattttgatattatgggac
cttgcatctggtaagaagaagcttcaggtacagacaggcgcgatcgacgcgtggcaggtc
gcattctcgcctgacgggtgcaatgtggtcaccggaggtcacatgggcaaaatatatgtg
tatgatgtccaacaaggtggggtggatggtgtgctggacactagagggaagtttatttct
agtgttgcgtggagtcccaataacaagtacatagcggccgggtcgatagatggcgctgtg
tttaccttcgacacgcaccagtgcaagttactgcatcacatcgacgcgcacacgttggcc
gtgaggagtgttgccttttctaataagagtgatcttcttgcaactgcctccaatgatggg
agaatgaagttgtttgattctgagtccggtcgccacttaaacacgttagagctcaaaggc
tgggtggtggcggttcgattcagcccggacggcactcggattgcgaccgccacgaccgac
ggcgttgtgtgcgtggtcgctatacgacagctgactgttcttcacgctttccaaggacat
gcggatacggtatgggatatccatttcaacaaaaatagtgataaactgttatcagtatct
aaagacaaatgcatcaacatttacgaatgtccaataccgccgccgcctgctaaaaagtaa
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