Manduca sexta (tobacco hornworm): 115442973
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Entry
115442973 CDS
T07401
Name
(RefSeq) transcription factor Sox-5
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
msex
Manduca sexta (tobacco hornworm)
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msex03000
]
115442973
Transcription factors [BR:
msex03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
115442973
SSDB
Ortholog
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Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
NOCA1_C
Motif
Other DBs
NCBI-GeneID:
115442973
NCBI-ProteinID:
XP_030024121
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Position
7:9512148..9694732
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AA seq
535 aa
AA seq
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MSSKRKSPPSKLQEGAADNEKAEAGPANLEFADHHESDSEQHYYKFSPSSSTRSSISEDD
HCDDERPSKKQRFEQTSDMTNNLLVPSSFLTLHQNDLQARRRGSSECSSPGAEAKVLGLC
NNNNSLLNHNSALSLAPPHKRSMDDVLKRLTSKMNNSTIKEEKRPTPSTTPVKQNNDGRG
VLDAAALRALAGESVLEKERQVSELILQLQMVREQLLAQQEHPKSISNVSAELELQRLQQ
EQLRRQELVRRGQHGMYPGPPLALLPLLEQMRPQPQAPPNVVPTPPWPATAQLAQLTAGA
RSPPPPDPDAPLNLSKQRSPSPAQPMMLPRFVPYPPMEEKSPYMPKEEEYSACNTSSWAQ
SPQEEVEKAKLVRQPRRDETGKPHIKRPMNAFMVWAKDERRKILKACPDMHNSNISKILG
ARWKAMSNAEKQPYYEEQSRLSKLHMEKHPDYRYRPRPKRTCIVDGKKMRISEYKNLMRT
RRQEMRQLWCRDGGSELGFLPSLSSPGPSNSSPPPNGGSYMNPSFSPPLSPREDD
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctaaaagaaagtcgccaccgtcgaaattgcaagaaggagccgccgacaacgag
aaagccgaagccggtcctgccaacctggagttcgctgaccaccacgagtcagactccgag
cagcactactacaagttctcgccgagctcctcaacccgaagctctatcagcgaagacgat
cattgcgacgacgaaagaccctcgaagaagcaacggttcgagcaaacgtcagacatgaca
aacaaccttctagtcccatcgtccttcctcacgctgcaccagaacgatctccaggcgaga
agacgtggatcgtcggaatgcagcagcccaggcgctgaggctaaggtgttggggctctgt
aataataacaactcattgttgaaccacaacagcgctttgtcgctggcgccgccgcacaag
cggtcgatggacgacgtcctcaagagattaacttcgaagatgaataacagtacgattaag
gaggagaagaggccgactccctcgacgacgccggtgaagcaaaacaatgacggcagagga
gtcctcgatgcagcggccctgcgcgcgctggcgggagagagcgtgttggagaaagagagg
caggtctccgagctgatactgcagttgcagatggtcagggagcagctgttagcgcagcaa
gagcatccgaagagtataagcaacgtgtcagccgagctggagctgcagcgactgcagcag
gagcagctgcggcgtcaggagttggtgcggcgcggacagcacgggatgtaccctggccct
ccgctggcattactgccactgctggagcagatgagaccacagccgcaagcgccgcctaat
gtggtccccacaccgccctggcctgcgacggcgcaactcgcgcagctcacggcgggcgcg
cgttcacctccaccccccgacccggacgcgccgctcaacctgagcaagcagcgctcccct
tcgccagcgcagccgatgatgctgccccggttcgtcccctacccacccatggaggaaaag
tctccttacatgcctaaagaagaagagtatagcgcttgtaacacatcttcatgggcccaa
tcgccgcaggaagaagtggaaaaggcaaagctggtgcgtcagccgagacgcgatgagacc
ggcaagccccacatcaagagacccatgaacgccttcatggtgtgggccaaggacgagcgc
aggaagatcctgaaagcctgccctgatatgcacaactctaacatatccaagatcctcggg
gcgagatggaaggccatgtcgaatgcggagaaacagccgtattacgaggaacagtcaaga
ctttcgaaactacatatggagaaacatcctgactataggtacagaccaaggccgaagcgg
acatgcatagtcgatgggaagaaaatgcgaatatccgaatacaagaacttgatgcgaacg
cgtcgacaggagatgcgtcagctgtggtgccgggacggggggagcgagctgggcttcctc
ccctccctctcgtctccaggaccttcgaactcgtccccaccccccaacggaggcagctac
atgaacccctcgttttctccgccgctgtcccccagagaggatgattga
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