Manduca sexta (tobacco hornworm): 115443316
Help
Entry
115443316 CDS
T07401
Name
(RefSeq) neurogenic locus Notch protein isoform X1
KO
K02599
Notch 1
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex04320
Dorso-ventral axis formation
msex04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115443316
09150 Organismal Systems
09158 Development and regeneration
04320 Dorso-ventral axis formation
115443316
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
EGF_3
Notch
NOD
Ank
NODP
Ank_5
Ank_4
Ank_3
EGF_2
EGF_DL_JAG
Ank_KRIT1
DUF5316
Motif
Other DBs
NCBI-GeneID:
115443316
NCBI-ProteinID:
XP_037300196
LinkDB
All DBs
Position
28:3306404..3457073
Genome browser
AA seq
2422 aa
AA seq
DB search
MINLFLNWDSLYVDVKLSTWICTSRYAGEFCQHLNPCHSESSPRCQNGGSCRVRPGASGG
SPSFACDCPLGYSASLCEIRVPAACDSAPCLNGATCRLTSLDTYECDCPPGYTGDECSHE
DHCASQPCRNGGRCVADNTTTAGYSCACPPGFTGSRCTEDVVECSSGSGPCHHGRCFNTH
GSYTCVCEPGYTGRDCDAEYVPCEPSPCLHDGRCTPLDPLRYECDCPPGYRGQNCEIDID
DCPGHLCQNGATCIDGLNSYTCECPPTFTGTLCEIDVDECALRPLVCQNGATCTNSLGGF
SCICVNGWTGPECSVNIDDCAGAACFNGATCIDRVGSFYCKCTPGKTGLLCHLDDACTSN
PCHADAICDTSPINGSYTCSCASGYKGLDCSEDIDECEQGSPCEHDGICVNTPGSFACNC
SVGFTGPRCETNVNECESHPCRNDGSCLDDPGTFRCVCMPGFTGTQCEVEIDECANNPCL
NGGVCHDLINAFRCTCVIGFTGARCQVNIDDCASSPCRNGGTCHDSIAGYTCECPPGYTG
MSCETNINDCLSAPCHRGECIDGDNSFTCNCHPGYTGRVCQTQINECESNPCQFGGHCED
LIGGYQCRCKPGTSGRNCEINVNECYSNPCRNGATCIDGINRYTCECIPGFTGQHCETNI
NECLSNPCANGGKCIDRINGFRCECPRGYYDARCLSDVNECASNPCINGGSCEDGVNQFI
CHCLPGYGGQRCERDIDECSSNPCQHGGTCHDRLNAYKCDCVLGFTGVNCETNIDDCAGN
PCLHGGSCIDLVNGYRCVCAPPHSGRNCENTLDPCTPNQCRHGGRCVAEASYAEFTCACP
VGWAGALCERDVDECAVTAPCHNHATCRNTDGSYACVCARGYEGKDCAVNTDDCASFPCQ
NGATCLDSIGDYNCVCASGFAGKHCEVDIDECQSRPCMNGATCNQYVASYTCTCPLGFSG
INCQTNDEDCTESSCMNGGTCIDGINSYNCSCPPGYTGSNCQFRINMCDSSPCDNGATCH
DHVTYYTCHCPYGYTGKHCEAYVDWCEGNPCENGATCSQKGPQYTCTCAPGWSGKLCDVE
MVSCKDAAIRKGVKLKQLCNNGSCEDIGNSHRCHCLDGYTGSYCQKEINECDSAPCQNGA
VCKDLVGTYQCQCAKGFQGQNCELNVNDCLPNPCQNGGTCHDLINNFSCSCPFGTLGKIC
EINVNDCKQDACHNNGSCIDKVGGFECKCPPGFVGPRCEGDINECLSNPCSAPGTQDCVQ
LVNDYHCNCKPGYMGRHCDAKVNFCANSPCQSGGICTAIQGGHECLCNDGFYGKNCEYSG
YACDSNPCQNGGYCHTSEIGGYVCECLSGLSGINCEVDSMNECLSNPCKHPEARCIDKPG
DYLCYCPRQWTGKNCDIHDPHSRGGYGSGGFNSKNPVLTLQELDLAYQREQCVKLGCKEK
QADHHCDEECNTYACEFDGNDCSLGINPWANCTAPIKCWEVFMDGECNEVCNTQACLFDG
RDCQKSLQRCNPIYDAYCQKHYANGHCDYGCNNAECNWDGLDCESEPPHLAEGVMSVTLL
MDMRTFKENSVAFLRDLGHQLRTTVLIKKDHLGNDMVYPWKGSTDVGLQDTEFGKKHNIV
FTERGQSGVLVYLEIDNRKCTSMSSSECFFSAQEAAEFLAATASKHSLSPDFPIFQVKGV
NPPTTDDGQTNYKYVFIGVILCLLAGLLIGVLVTANRKRAAGVTWFPEGFMRNNSSTRRR
SRRRGPDGQEMRNLNKGSMGCIDVDINGGHMVPPHWSDEDDDGSAPPRAKRARGPGDANG
APGGYASDHTAITDYEEAGHDSRVWTQQHLDAADIRVPPSMMTPPGIHDGHVDVDARGPL
GMTPLMVAAVRGGGLDAGSDAEDEAAAHAISELVAQGAQLDAAMDKTGETSLHLAARYAR
ADAAKRLLDAGADANSQDNTGRTPLHAAVAADALGVFQILLRNRATNLNARMHDGTTPLI
LAARLAIEGMVEDLINADADINAADNSGKTALHWAAAVNNVDAVNVLLAHGANRDAQDDK
DETPLFLGAREGSYGACRALLDAMANREITDHMDRLPRDVAQERMHDDIVRLLDDHCPRP
PPQHHHLMSSPNPHPQLLNQPTVISASAAKGKPKKPRAKAGPDSPQDQIFDNNNLQQTQI
RRKPSVKKSNKKVAQEVPQSVESLGSSLSPVESPLQNLQDLPSPYDATSLYSNAMAQFVS
MQHKQPPSYEDCVKYCWQPGQTLQPYGGGGLGASLSPPYSNHSGHSNHSPTHSNHTASPH
AYIGSPSPGKSRPSLPTSPAHMAALRHSHQHQLDAYSTLAHLGANGQHGSAQLQAVMTHA
AALGQVQAAQHPHINIMSGLYGSWGIGDTFPTPSPESPEHWSSPSPQTPLTQSPHSDWSD
RAALSPNDLQQTNKGGTEAIYI
NT seq
7269 nt
NT seq
+upstream
nt +downstream
nt
atgataaatctttttttaaactgggactcattatatgtcgatgttaaattgtctacgtgg
atctgcacatcgaggtacgcgggcgagttctgccagcacctgaacccttgccacagcgag
tcgtcgccgcgttgccagaacggcggctcgtgccgcgtccggcccggcgccagcggcggc
tcgccctccttcgcctgcgactgccctctcggctacagcgcatcactatgcgagatcaga
gtgccagctgcgtgcgactccgcgccttgtctcaacggggctacgtgtcggctgacgtca
ttggatacttatgagtgtgactgcccgccagggtatacaggagacgaatgctcgcacgaa
gaccactgtgcgtcgcaaccctgccgcaatggtggccgatgcgtcgccgacaacaccact
actgcgggctactcgtgcgcctgtccccctggctttaccggctcccgctgcactgaggac
gtcgttgaatgctccagcggctccggcccctgccatcacggccggtgcttcaacacccac
gggtcatacacctgtgtgtgtgagccagggtacaccggcagggattgtgatgcggagtac
gtgccgtgcgaaccatccccttgtctgcatgatggaagatgcactcccctggatccgttg
cgatacgagtgtgattgtccgcctggttaccgcggccagaactgcgagatcgacatcgat
gactgtcctggccacctgtgccagaacggcgccacgtgcatcgacggcctcaactcctac
acttgcgagtgccctcccaccttcaccggcacgctttgtgagatcgacgttgacgagtgc
gctctcagaccacttgtgtgccagaacggggcgacatgcaccaactccttgggtggtttc
tcgtgtatatgcgtgaacggctggacggggcccgagtgctccgtgaacatcgacgactgc
gccggcgcagcgtgcttcaacggcgccacctgcatcgacagggtcgggtcgttctactgt
aaatgcacccctgggaagactggtctcctctgccacctggacgacgcctgtacttccaac
ccttgccacgccgatgccatctgcgacaccagccccatcaacggctcctacacctgctca
tgcgcatctggttacaaggggctggactgttctgaggatatcgacgagtgtgaacaagga
tctccttgcgaacacgacggcatctgcgtgaacacgcccggctccttcgcgtgcaactgc
tctgtgggcttcaccggcccgcgctgcgagactaacgtgaatgagtgcgagagccacccc
tgcaggaacgacggctcctgcctcgatgaccctggcaccttccgctgcgtctgtatgcct
ggttttactggaacacaatgcgaggtggagatagacgagtgcgcgaacaacccgtgcctg
aacggaggcgtctgccacgacctgatcaacgcgttcagatgcacttgcgttattgggttc
acgggagctcggtgccaagtgaacatcgacgactgcgcgtcaagtccttgccggaacggc
ggcacctgccacgactccatcgctgggtacacttgcgaatgtccacccgggtatactggt
atgtcgtgcgagacgaacataaacgattgtctgtcggcgccgtgccaccgcggcgagtgc
atcgacggcgacaacagtttcacgtgcaactgccaccccggctacacgggccgcgtgtgc
cagacgcagatcaacgagtgcgagtccaacccctgccaattcggaggccattgcgaggac
cttatcggcggctaccagtgccgctgcaagccgggcacctcaggacgcaactgcgagatc
aacgtcaacgagtgctactccaacccctgcaggaatggcgccacctgcatcgacgggatc
aacagatacacctgcgagtgtatcccgggcttcactggccaacactgcgagaccaacatc
aacgaatgtctgtccaatccctgcgccaacggcggcaagtgcatcgaccgcatcaacgga
ttccgctgcgagtgtccccgcgggtactacgacgctaggtgtttatcggacgtgaacgag
tgcgcttcgaatccgtgcattaacggaggctcctgtgaggacggagtcaatcagttcatc
tgccattgtctacctggatatggaggacagcgctgcgagcgcgacatcgacgagtgcagc
tccaacccgtgccagcacggcggcacgtgccacgaccggctcaacgcgtacaagtgcgac
tgcgtgctcggattcaccggtgtaaattgcgagacgaacatcgacgactgtgccggcaac
ccctgcctacacggcgggtcctgcatagatcttgtaaacgggtaccgctgcgtgtgcgca
ccgccgcactccggacggaactgcgaaaacacgctcgatccgtgcacgcccaaccaatgt
cgccacggcggccggtgcgtggcggaggcgtcgtacgcggagttcacgtgcgcgtgcccg
gtgggctgggcgggcgcgctgtgcgagcgcgacgtggacgagtgcgccgtcaccgcgccc
tgccacaaccacgccacgtgccgcaacaccgacggctcctacgcctgcgtctgcgcacgc
ggctacgagggcaaggactgcgctgtcaacactgatgattgcgcttcattcccatgtcaa
aacggcgcgacgtgtctggacagcatcggtgattacaactgcgtgtgcgcaagcgggttc
gcaggcaagcactgcgaggtggacatcgacgagtgccaatccagaccttgtatgaacggc
gctacttgtaatcagtacgtggcctcgtacacgtgcacatgcccgctcgggttctcgggc
atcaactgccagaccaacgacgaggactgcaccgagtccagctgcatgaacggcggcacc
tgcatcgacggcatcaactcttacaactgctcctgtccgcctggctacacgggctctaac
tgccagttccgcataaacatgtgcgacagctcgccgtgcgacaacggcgccacgtgccac
gaccacgtcacctactacacctgccactgcccctacgggtacactgggaagcactgcgag
gcctacgtcgattggtgtgagggcaacccgtgcgagaacggcgctacttgctctcagaag
ggtccgcagtacacgtgcacctgcgcgccgggctggtccggcaagctctgcgacgtcgag
atggtgtcctgcaaggatgctgccatcagaaaaggtgtgaaactaaaacaactttgtaac
aacgggtcatgcgaagacatcggcaactcccaccgctgccactgcctcgacggatacacc
ggctcctattgccagaaggagatcaacgagtgcgactccgcgccgtgccagaacggcgcc
gtgtgcaaggacctcgtcggcacttaccagtgccaatgtgccaaaggattccagggccag
aactgcgaactcaacgttaacgattgcctgccaaacccgtgccagaatggcggaacttgc
cacgatctgatcaacaacttctcttgttcctgtccctttggcactttggggaagatctgc
gagatcaacgtcaatgattgcaagcaagacgcgtgtcacaacaacggctcatgcatcgac
aaagtaggtgggttcgagtgtaagtgcccgcccgggttcgtcggcccgcggtgcgaagga
gacatcaacgaatgcctctcgaacccttgctcagcgcccggcactcaggactgcgtgcag
ttagtcaacgactaccactgtaactgtaaacctggctacatgggcagacattgtgatgcc
aaagtcaacttctgcgcaaactctccgtgccagagtggaggaatatgtacagcgattcaa
ggcggtcacgaatgcctatgcaacgacggattctacggtaaaaattgcgaatattctggc
tatgcttgcgactccaatccttgccagaatggcgggtattgccacacgtctgaaattgga
ggttatgtgtgtgaatgcttgtcagggttgtcaggcatcaattgcgaggtagattctatg
aatgagtgtctcagtaatccttgcaaacatcctgaggcgcgctgtatcgacaaacctgga
gactatctctgttactgcccgagacagtggaccggcaagaattgcgacatccacgaccct
cattcgagaggagggtatggtagcggcggattcaacagcaagaatccagtgttaacatta
caagaacttgatttggcttaccaacgggaacaatgcgtgaaattgggctgcaaagagaaa
caagctgaccaccactgtgacgaagaatgcaacacgtacgcatgtgaatttgatgggaat
gactgttcattgggtatcaacccttgggctaactgtactgctccaatcaaatgctgggaa
gtgttcatggatggcgaatgtaacgaagtctgcaacacacaagcttgtcttttcgatggt
cgagattgccagaaatccttgcaaagatgcaaccctatttacgacgcatattgccagaag
cattacgctaacggtcactgcgattacggctgcaacaatgctgagtgtaattgggatggt
ctggattgcgaaagtgagcctcctcatttggctgaaggagtcatgtcagttaccttactt
atggatatgagaacgttcaaagaaaactctgtagcgttcttgcgagatttggggcaccaa
ctacggacaactgtgttgataaagaaggatcatttaggaaacgatatggtctacccatgg
aagggatcgaccgacgttggtctccaggatacagagttcggtaagaagcacaacatcgtc
tttaccgaaaggggacagtcaggagtactggtgtacctagagatcgacaacaggaagtgc
accagcatgtctagctctgagtgcttcttctcggcgcaggaagctgcggagttcttggcc
gctacggcgtccaagcattccttgtcaccggactttccgatatttcaagttaaaggcgta
aatccacccacaactgacgatggccaaaccaactacaaatatgtgttcatcggagtgata
ttatgccttcttgctggtcttttgatcggagtgttagtaacggcgaataggaagcgtgct
gcaggtgtgacgtggttccctgaagggttcatgcggaacaattcctcgacgagaagacgt
tcgcgtcgccgaggacctgatgggcaggagatgaggaacctcaacaaagggtccatgggt
tgtatcgatgtagatattaacggaggtcatatggtgcctcctcactggtctgacgaggac
gatgatgggtcagctcctcccagagctaagagggcacgagggcccggcgacgccaatggc
gctccgggaggctacgcgtctgatcacacagcgatcacggactacgaggaggcgggtcac
gactctcgggtgtggacgcagcagcacctggacgcggcggacatcagggtgccgccgagc
atgatgacgccgccgggcatccacgacgggcacgtggacgtggacgcgcgcgggccgctg
ggcatgacgccgctgatggtggcggccgtgcgcggcggcgggctggacgcgggctccgac
gcggaggacgaggccgccgcgcacgccatctccgagctcgtggcgcagggcgcgcagctc
gacgccgccatggacaagaccggcgagaccagtctgcatctcgccgccaggtacgcgcga
gcggacgctgccaaacgtctcctcgacgccggtgcagacgcaaactcgcaggacaacacc
ggccggacgccgttacacgccgccgtcgctgcagacgcgctcggcgtgttccaaatcctg
ctcaggaatagagccaccaacctcaatgcgaggatgcatgacggcaccacgccactcatt
ttggctgctagactggccatcgagggaatggtggaggacctgatcaacgccgatgcggat
ataaacgcggcggacaacagcggcaagacggcgctgcactgggccgctgccgttaacaat
gttgacgccgtcaacgtgttactcgcgcacggtgccaacagagacgcgcaagacgataag
gatgaaaccccgctgttcctgggcgctcgagaaggttcatacggcgcgtgccgagcgttg
ctggacgcgatggcgaacagagagatcacggaccacatggaccgactgccgcgcgacgtg
gcgcaggagcgcatgcacgacgacatcgtgcgcctcctcgacgaccactgcccgcgcccg
ccgccgcagcatcaccatctcatgtcatctccgaacccacacccgcagctgctgaaccag
ccaacagtgatcagcgcgtcggcggctaagggtaagccgaagaagccgcgcgccaaggcc
gggcccgacagcccgcaggaccaaattttcgacaacaacaacttgcaacaaacacaaata
agacggaagccaagcgtaaaaaagagtaataagaaagtggcacaggaagtgccacagagc
gttgagagcctgggctctagcctcagccctgttgaatcaccgctccaaaatttacaggac
ttgccgtcgccgtacgacgcaacgtcattgtactcgaacgcgatggcgcagttcgtcagc
atgcagcacaagcagccgcccagctatgaggactgcgtcaagtattgttggcagccgggt
cagacgctgcagccgtacggcggcggcgggctgggcgcgtcgctgtcgccgccctactcc
aaccactcgggacactccaatcactcgcccacgcacagcaaccacaccgcctcgccacat
gcgtatattgggtccccgtcgccgggcaagtcgcggccgtcgctgccgacgtcgccggcg
cacatggcggcgctgcgccactcgcaccagcaccagctcgacgcgtactccacgcttgcg
catctcggtgctaacgggcagcacgggtcggcgcagctgcaggcggtgatgacgcacgcc
gctgcgcttgggcaggtgcaggccgcgcagcatccacacatcaacattatgtcgggtctg
tacggaagctggggtattggcgacacgttccccactccatcgcccgagtctcctgaacac
tggtcgtcgccgtcgccgcagacgccgcttacgcagtcgccgcactccgactggtccgac
cgcgccgcgctctcgccgaacgatctgcagcagaccaacaagggcggcaccgaagccatt
tacatttaa
DBGET
integrated database retrieval system
