Manduca sexta (tobacco hornworm): 115443410
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Entry
115443410 CDS
T07401
Name
(RefSeq) RNA helicase aquarius isoform X1
KO
K12874
intron-binding protein aquarius
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115443410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msex03041
]
115443410
Spliceosome [BR:
msex03041
]
Complex B
Other components
Prp19-related factors
115443410
Complex C
115443410
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
ResIII
UvrD-helicase
AAA_30
AAA_16
DEAD
AAA
Parvo_NS1
AAA_22
SLFN-g3_helicase
UvrD_C_2
nSTAND3
PhoH
AAA_25
NB-ARC
ATPase
Motif
Other DBs
NCBI-GeneID:
115443410
NCBI-ProteinID:
XP_030024657
LinkDB
All DBs
Position
13:complement(11377461..11459350)
Genome browser
AA seq
1432 aa
AA seq
DB search
MKVDATPPPDKPKIPLPTLSQINADRITQLATQYWSPQSKETHLPYDASIVESIYHTEIL
GSNYAVRRIMMLEFSQYLENYLWPHYDSSTATQAHMMSIVVMINEKFRERVPAWQAFLKK
PEQFPGFFEQVLRVSVAEDHTSNNMREQTALLLFLNHCFGSMEVQLCRDQVKRLVSLSMW
ISLQEGRRNQEFKKVPKWKKYWRAIQKKDKPELLEKLNWERRYLQRLMIKFMRILEGVDD
NEEIDPHVIRYCERFLELMIDLEALLPTRRFFNTVMDDCHLVVRCQMSALAQRPEGQLFS
QLLQMLKFYARFEINDETGDPMADRDMTLLHYSRITSLQKAAFSKFQDLRLFSLANVASV
DTRDALQKHFGNLSDKALRAIATYLNLIPPEGKEDEAPWHRLDKTFLKELLISRHERRIS
QLEELNSMPLYPTEEIIWDENVVPTEIYSGENCLALPKLNLQFLTLHDYLLRNFNLFRLE
STYEIRQDIEDAVYRLAPWRAEDDSVYFGGWARMAHPIKSFAVVEVAKPNIGEKAPSRVR
ADVTVTLSVRNEIKHEWESLRKHDVCFLITVRPTQGIGTKYDYRKSMVEQAGIVYVRGCE
VEGMLDASGRVIEEGPEPRPELEGDSRTFRLLLDPNQYRLDLDRASKGNEDVYETFNIVM
RRKPKENNFKAVLETIRELMNTECVVPEWLHDIVLGYGDPGQAHYTRMPNEIATLDFNDT
FLDMEHLRNSFPGHEIKVQTDDPRKLIRPFKLTFENVARKQQQDENATEEDKQRKVIIVE
PHVMPKRGPYLYNEPKKNTILFTPTQVEAIRSGMQPGLTLVVGPPGTGKTDVAVQIISNL
YHNFPWQRTLVVTHSNQALNQLFEKVAELDVDERHLLRLGHGEEALQTDKDFSRYGRVNY
VLAKRLELLELVGKLQRTLDAGGDAGATCELAHHFHVYHVKPRWQNFTDKCTNDQTKSVE
TISKEFPFHEFFDDAPKPLFPGKSYEEDMEIAKSCYRYINHIFEELEEFRAFELLRSGLD
RSKYLLVKEAKIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQNPQ
DGRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARSS
ICNLYRWRYLALGDLGHVTRLPEYRGANAGLRYDFQLVNVDDFNGVGETEPSPYFYQNLA
EAEYVVAVFMYMRLVGWPAERISILTTYNGQKHLIRDVIDKRCAENPLIGRPHKVTTVDK
YQGQQNDIALISLVRTKAVGHVRDLRRLIVAASRARLGLYIFARVNLFRNCFELQPTFNQ
LVERPLQLELVPGERYPAQRRNEAQVPDSLILRITDMPHMARYVYDMYIEKVRDCSKQFE
SSPRAWVAPGSERAARSQQAHALVAAHPGADDDDEPPAFRPIDIVNELDDDN
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtagacgcaacaccaccccctgataaacctaaaatacctttaccgactttgtca
caaataaatgccgatagaataacacagctagccacacagtactggtcaccgcagagtaag
gaaacccacttaccttacgatgcttctattgtggaatctatataccacacggaaattctt
ggatccaattatgcagtacgacgcatcatgatgttggaattctcgcagtacctggaaaac
tacctgtggccacattatgactccagtacagcaacacaagcccacatgatgtccatagtt
gttatgataaatgaaaagtttcgggagagggtgccggcttggcaggcatttctaaagaag
ccagaacagttccccgggttttttgagcaagtactacgcgtcagtgtcgccgaggaccac
acgagtaacaacatgcgagaacaaaccgcattgcttctgttcctgaaccattgttttggc
agtatggaggtgcaactctgccgggatcaggtcaaacgacttgtctcgttgagtatgtgg
atcagtttacaagaagggagacgaaatcaagaatttaaaaaagtaccgaaatggaaaaaa
tattggcgtgcaattcaaaagaaagataagccagagttattagaaaaacttaactgggaa
cgacgttacttgcaacggctgatgataaaattcatgcgcatcttggagggagtggacgac
aacgaagaaatagatccacatgtcatcagatactgtgagcgttttcttgagttgatgatc
gatttggaagcattgctgccaacgcgccgttttttcaacaccgtgatggatgactgccat
ctcgtcgtgcgctgtcagatgtccgctcttgcgcagaggccggaagggcaacttttctca
cagctgctccaaatgttgaagttctatgcacgatttgaaatcaatgatgaaactggtgat
ccaatggcagatcgtgacatgactcttttacattattccagaattacgtcattgcagaaa
gcggcgttctcaaaattccaagatttacgtttgttttctttggcaaatgtagccagcgtc
gacaccagggatgcattgcagaaacatttcggcaatttgagtgataaggctcttcgggct
atagccacttatctgaatctcattccaccggaaggcaaagaagatgaagctccttggcac
cgtctcgataaaacctttcttaaagaattgctgatatccagacacgagcgccgcatatca
caattggaggagctcaattcaatgcctttatatccgactgaagaaattatatgggacgag
aatgtcgtacccacagagatttacagtggtgaaaactgtctcgcattaccaaaattaaac
ctgcagtttctgaccctacatgattacctgcttagaaatttcaatctgttccgcctggag
agtacatatgaaatacgacaagacattgaagacgcagtctacagactggctccatggcga
gcagaagacgatagcgtatacttcggtggttgggcgcgaatggctcatcccattaagagt
tttgccgtagtggaagttgcgaaacctaatatcggggaaaaagcaccgtccagagtccgt
gccgatgttactgttactcttagcgtccgaaatgagatcaaacacgaatgggaaagtcta
aggaagcacgatgtttgctttttaattactgtgagaccaacacagggtataggtactaaa
tatgactacagaaagagtatggtagagcaagcgggcatagtatatgtccggggatgtgaa
gtagagggtatgttagacgcgtctggcagagtcatcgaagaaggccctgaaccgagaccc
gaattagaaggagattctagaaccttccgactattgctggaccccaaccagtatagactc
gatttggaccgtgctagcaaaggaaatgaagatgtatatgaaacatttaacatcgttatg
cgacgaaagccaaaagaaaacaattttaaggccgtgctggagactataagggaattgatg
aatacggaatgcgttgtacctgaatggctgcacgatatcgtgcttggatacggtgatccg
ggacaagctcattacaccagaatgccaaatgaaattgcaactttggactttaacgacacc
ttcctggatatggagcacttgcgtaacagcttcccgggacatgaaatcaaggtgcagact
gacgatccacgtaaactgatcagacctttcaagttaactttcgagaacgttgcacgcaag
cagcagcaagatgagaatgcgacggaagaagacaaacagcgcaaagtgattatcgtcgaa
ccgcacgttatgccgaagagaggcccgtacttgtacaacgaaccgaaaaagaatacaata
ttatttaccccaacgcaagtggaagctattagatctggtatgcagccgggtttaactctg
gtcgtgggtccgccgggaacaggtaaaacggacgtcgccgtgcaaataatatcgaatctg
taccacaattttccctggcaacgtacattggtggtcacacacagcaaccaagctctgaat
caattgttcgagaaagttgccgaattggatgttgatgaacgacatctcctacgtctgggt
catggagaagaagcgttgcagacggacaaggacttttctagatatgggcgcgtgaattac
gtgctggcgaaaaggctggaattactggagctggtggggaagctgcagaggaccctagac
gcgggcggagatgcgggcgccacgtgcgagctggcgcaccacttccacgtgtaccacgtc
aagccccggtggcagaacttcactgacaaatgcactaacgatcagacaaaatccgtggag
accataagcaaggagtttcctttccacgaattctttgacgatgcacccaaaccacttttt
cccggcaagtcctatgaagaggacatggagatagctaagagctgttacagatatatcaac
cacatatttgaagaattggaagagtttcgtgctttcgagctactgcgttccggtttggat
cgttcgaaatatttacttgtaaaagaagcgaaaataatagccatgacatgtacccatgca
gcgttgaaacgatccgaactcgtacaaatgggcttcaaatacgacaacatcctcatggaa
gagtctgctcaaatcctcgaaatcgaaacgttcataccgctgctgcttcaaaatccacaa
gatggcaggtctaggctcaaacgatggatcatgatcggagatcatcaccagcttccaccg
gtggtgaagaacatggccttccagaagtactgcaacatggaacaaagtctcttcacgagg
atggtcaggctgggagtgccatatgttgaactggatgctcagggtcgtgcgcgatcaagt
atctgcaacttgtaccgatggcgctacctggcactgggtgacctcggccatgtgactcgc
ctaccggaataccgcggcgcaaacgcaggcctccgctacgacttccagctcgtcaacgtg
gacgatttcaacggagttggggaaacggagccaagtccttacttctatcagaacctagcg
gaagcggagtacgtggtggcggtgttcatgtacatgcggcttgtggggtggccggcggag
cgcatctccatcctgaccacgtacaacgggcagaaacacctcatccgggacgtcatcgac
aaacggtgcgccgaaaaccctctcatcggacgaccacacaaggtgacgacagtggacaag
tatcagggccagcagaacgacatcgcgctgatatctctggtgcgcacgaaggcggtcggc
cacgtgcgcgacctgcgccgtctgatcgtcgccgcgtccagggcacgactcgggctgtac
atattcgccagagtaaatctgttcaggaattgtttcgaactgcagcccactttcaatcag
ttggtcgagaggccgctgcaattggagttggtgccgggcgagcggtatccggcccagcgg
cgcaacgaggcacaagttcccgactcgctgatcctacgcatcactgatatgccgcatatg
gcccgatacgtttacgatatgtatatagagaaggttcgagactgcagcaagcagtttgag
agctctccgcgcgcgtgggtggcgccgggctcggagcgcgcggcgcgctcgcagcaggcg
cacgcgctcgtggcggcgcaccccggcgccgacgacgacgacgagccgcccgccttccgc
cccatcgacatcgtcaacgaactcgacgacgacaactga
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integrated database retrieval system
