Manduca sexta (tobacco hornworm): 115444017
Help
Entry
115444017 CDS
T07401
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
115444017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msex03400
]
115444017
DNA repair and recombination proteins [BR:
msex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
115444017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
DUF724
Motif
Other DBs
NCBI-GeneID:
115444017
NCBI-ProteinID:
XP_037296265
LinkDB
All DBs
Position
19:complement(7383767..7401140)
Genome browser
AA seq
848 aa
AA seq
DB search
MGLEPNRLDYLVLSKGNFEILVKKLLLVRRYRVEIYVAEGSVKGSDWAIKYKGSPGCLSQ
LEEVLGDGLGGADGNTPCLMAVNIKIDPVTKGRLLGVACVTAGDYEMSVTEFTDDDLLTE
LETITVQMAPSECLVPATDNDDYKALKKVMERTNVTVTKLKKTDFSTEGLIQDLNRLLKF
KDSQQRDANSFQETTKEVAMTCLAAAIKYISLLSDSTNFARFKLSSIQAECFLHLDAAAL
SALNVLPELGDTHAPARSLFGLLDRCRTQQGKRLLAQWLRQPLRDINLINERLDVVELLM
NNSQLRLQLHEDHLRRIPDLQALARRLTRKKANLHDCYRIYQAINRLPSLLQCLSEANNA
TVHSSLTEPISELNDDLNKYQQMIEATMDMDAVDRGDFLVKPTFDEQLQALSEQLEEFQS
SAEKELNKAARDLGMEAGKTIKLESNPQNGFYFRVTLKEEQTLRGNKKYTIIDAVKGGVR
FKTKSLEDITDEYTQTKTNYEKEQDKVVAEIVGIAAGYSECLFCLSHILSRLDVLVSFAV
AAATAPYPYCRPVITEDLDELVLEDLRHPCLEVQEGVSYIPNDVVFKRGSCLLHVVTGAN
MGGKSTWMRSCGAAAVLAQAGAALPARAARLPALRALRARIGAADLEQRGHSTFMREMID
TAAILRTATPDSLVLVDELGRGTSTYEGCGIAWAIAEELATVCKCFCLFATHYHELTRLA
SLHPGVIVNSHAEASVVDQQLVLLHKIVPGPATASLGLHVAKLADLPDSIIEYAEAKQAQ
LETNLFEIESAVKTQETSEGQKLILEFLKKCKEVQESITSDKDMMLEIAKLKDTLLKHNN
KYVESLIA
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgggcctcgaacccaatcgcctcgactatcttgtactgtcgaagggaaactttgagata
ctcgtcaagaaattgttgttggtacgccggtaccgagttgaaatatacgtagcagaaggt
tcagtaaaggggagcgactgggctatcaagtacaaagggtcgccaggatgtttgtcccag
ctggaggaggtactgggagatggtttgggcggtgccgatgggaatactccatgtctgatg
gcggttaacatcaaaatcgacccagttactaaaggtcggcttctaggagtggcttgtgtg
actgcaggtgactatgaaatgtcggtcacggagttcactgacgacgatcttctcacagag
ttagaaacgatcacggtacagatggcgccttcggaatgcttagtgccggccactgataat
gatgattacaaagctctcaaaaaggttatggaaaggaccaacgtgactgttactaagttg
aagaaaaccgatttctcgacagaaggtctaatacaagatttgaaccggttgttaaagttc
aaagacagtcagcaacgagatgcgaattcatttcaagagacaacgaaagaggttgcgatg
acgtgtctcgctgctgctataaaatacatctcgttgctgtcagatagcactaattttgcc
aggtttaaactatcgtcgatccaagcggagtgcttcctgcatttggacgcggcggcgctg
tcggcgctgaacgtgctgcccgagctgggagacactcacgcgccggcgcggagtctgttc
ggcctacttgacagatgtcgcacgcaacagggcaaaagacttttagcgcagtggcttcgg
cagccgcttcgcgacataaaccttattaacgaacgtcttgacgtggttgaattgttgatg
aacaattcgcaattgcgattacaattacatgaggaccatttacgacgcattccggatttg
caagcgttggctcgacgactcacaaggaagaaggctaacttgcacgactgctataggatt
taccaggcaatcaacaggctaccgtcattactgcaatgtctttccgaagccaacaatgca
actgtacactcatcgctcaccgaacctatctccgaactgaacgacgatctgaacaaatac
caacagatgatagaagctaccatggacatggatgctgtcgatagaggcgacttccttgtc
aagccaacttttgacgagcaactacaagctctaagtgaacagttggaagagtttcaatcg
tctgctgaaaaggaattgaacaaggcagccagagatcttggtatggaagcaggaaaaact
atcaaactagagagtaaccctcaaaacgggttttattttagagtaactcttaaagaagaa
caaacattgcgcggcaacaagaaatacacaattatcgacgctgtcaaaggaggcgtaaga
ttcaaaacgaaaagtctggaagatataaccgacgagtacactcaaacaaaaaccaattac
gaaaaagaacaagacaaagttgttgccgaaatcgttggaatagcggctggctactccgag
tgtttgttttgcctatcgcacattctatcccgtttggatgtcctggtgtcattcgccgtc
gcggctgcgaccgcgccgtacccttactgccggcccgtcatcacggaagaccttgatgaa
ctagtccttgaggaccttagacacccatgcctggaagtacaggaaggcgtttcttatata
ccaaacgatgtggtttttaaacgagggtcgtgcttgctgcacgtggtgacgggcgcgaac
atgggcggcaagtcgacgtggatgcgctcgtgcggcgcggcggcggtgctggcgcaggcg
ggcgcggcgctgccggcgcgcgcggcgcggctgcccgcgctccgcgccctgcgcgcgcgc
atcggcgccgccgacctcgagcagcgcggacacagcaccttcatgcgcgagatgatcgac
actgcggctatactcaggactgccaccccagattcgctcgtgcttgtcgacgaactgggc
agaggcacttccacatatgaaggctgcggcatagcttgggcgatagctgaggaactggcg
acagtatgcaaatgtttctgtctattcgcgacgcactaccacgagttgacgcggctggcg
agcctgcaccccggcgtcattgtcaactcgcacgcggaagcctccgtcgtggatcaacaa
ctggtgcttcttcacaagatcgttcccggtcctgccacggcctccctcggtctgcacgtc
gccaaactggctgatttaccagattctatcatcgagtatgcagaagcaaaacaagcacaa
ttggaaactaatttatttgaaattgaatccgctgtgaagactcaagaaacatccgaaggt
caaaaattaatattggaatttttgaaaaaatgtaaagaagttcaagaatccatcacttca
gataaagatatgatgctagaaattgctaaattaaaagatacattactgaaacataacaat
aagtacgtagaatctctaatagcataa
DBGET
integrated database retrieval system