KEGG   Manduca sexta (tobacco hornworm): 115444017
Entry
115444017         CDS       T07401                                 
Name
(RefSeq) DNA mismatch repair protein Msh2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
msex  Manduca sexta (tobacco hornworm)
Pathway
msex03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:msex00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    115444017
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msex03400]
    115444017
DNA repair and recombination proteins [BR:msex03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     115444017
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_II DUF724
Other DBs
NCBI-GeneID: 115444017
NCBI-ProteinID: XP_037296265
LinkDB
Position
19:complement(7383767..7401140)
AA seq 848 aa
MGLEPNRLDYLVLSKGNFEILVKKLLLVRRYRVEIYVAEGSVKGSDWAIKYKGSPGCLSQ
LEEVLGDGLGGADGNTPCLMAVNIKIDPVTKGRLLGVACVTAGDYEMSVTEFTDDDLLTE
LETITVQMAPSECLVPATDNDDYKALKKVMERTNVTVTKLKKTDFSTEGLIQDLNRLLKF
KDSQQRDANSFQETTKEVAMTCLAAAIKYISLLSDSTNFARFKLSSIQAECFLHLDAAAL
SALNVLPELGDTHAPARSLFGLLDRCRTQQGKRLLAQWLRQPLRDINLINERLDVVELLM
NNSQLRLQLHEDHLRRIPDLQALARRLTRKKANLHDCYRIYQAINRLPSLLQCLSEANNA
TVHSSLTEPISELNDDLNKYQQMIEATMDMDAVDRGDFLVKPTFDEQLQALSEQLEEFQS
SAEKELNKAARDLGMEAGKTIKLESNPQNGFYFRVTLKEEQTLRGNKKYTIIDAVKGGVR
FKTKSLEDITDEYTQTKTNYEKEQDKVVAEIVGIAAGYSECLFCLSHILSRLDVLVSFAV
AAATAPYPYCRPVITEDLDELVLEDLRHPCLEVQEGVSYIPNDVVFKRGSCLLHVVTGAN
MGGKSTWMRSCGAAAVLAQAGAALPARAARLPALRALRARIGAADLEQRGHSTFMREMID
TAAILRTATPDSLVLVDELGRGTSTYEGCGIAWAIAEELATVCKCFCLFATHYHELTRLA
SLHPGVIVNSHAEASVVDQQLVLLHKIVPGPATASLGLHVAKLADLPDSIIEYAEAKQAQ
LETNLFEIESAVKTQETSEGQKLILEFLKKCKEVQESITSDKDMMLEIAKLKDTLLKHNN
KYVESLIA
NT seq 2547 nt   +upstreamnt  +downstreamnt
atgggcctcgaacccaatcgcctcgactatcttgtactgtcgaagggaaactttgagata
ctcgtcaagaaattgttgttggtacgccggtaccgagttgaaatatacgtagcagaaggt
tcagtaaaggggagcgactgggctatcaagtacaaagggtcgccaggatgtttgtcccag
ctggaggaggtactgggagatggtttgggcggtgccgatgggaatactccatgtctgatg
gcggttaacatcaaaatcgacccagttactaaaggtcggcttctaggagtggcttgtgtg
actgcaggtgactatgaaatgtcggtcacggagttcactgacgacgatcttctcacagag
ttagaaacgatcacggtacagatggcgccttcggaatgcttagtgccggccactgataat
gatgattacaaagctctcaaaaaggttatggaaaggaccaacgtgactgttactaagttg
aagaaaaccgatttctcgacagaaggtctaatacaagatttgaaccggttgttaaagttc
aaagacagtcagcaacgagatgcgaattcatttcaagagacaacgaaagaggttgcgatg
acgtgtctcgctgctgctataaaatacatctcgttgctgtcagatagcactaattttgcc
aggtttaaactatcgtcgatccaagcggagtgcttcctgcatttggacgcggcggcgctg
tcggcgctgaacgtgctgcccgagctgggagacactcacgcgccggcgcggagtctgttc
ggcctacttgacagatgtcgcacgcaacagggcaaaagacttttagcgcagtggcttcgg
cagccgcttcgcgacataaaccttattaacgaacgtcttgacgtggttgaattgttgatg
aacaattcgcaattgcgattacaattacatgaggaccatttacgacgcattccggatttg
caagcgttggctcgacgactcacaaggaagaaggctaacttgcacgactgctataggatt
taccaggcaatcaacaggctaccgtcattactgcaatgtctttccgaagccaacaatgca
actgtacactcatcgctcaccgaacctatctccgaactgaacgacgatctgaacaaatac
caacagatgatagaagctaccatggacatggatgctgtcgatagaggcgacttccttgtc
aagccaacttttgacgagcaactacaagctctaagtgaacagttggaagagtttcaatcg
tctgctgaaaaggaattgaacaaggcagccagagatcttggtatggaagcaggaaaaact
atcaaactagagagtaaccctcaaaacgggttttattttagagtaactcttaaagaagaa
caaacattgcgcggcaacaagaaatacacaattatcgacgctgtcaaaggaggcgtaaga
ttcaaaacgaaaagtctggaagatataaccgacgagtacactcaaacaaaaaccaattac
gaaaaagaacaagacaaagttgttgccgaaatcgttggaatagcggctggctactccgag
tgtttgttttgcctatcgcacattctatcccgtttggatgtcctggtgtcattcgccgtc
gcggctgcgaccgcgccgtacccttactgccggcccgtcatcacggaagaccttgatgaa
ctagtccttgaggaccttagacacccatgcctggaagtacaggaaggcgtttcttatata
ccaaacgatgtggtttttaaacgagggtcgtgcttgctgcacgtggtgacgggcgcgaac
atgggcggcaagtcgacgtggatgcgctcgtgcggcgcggcggcggtgctggcgcaggcg
ggcgcggcgctgccggcgcgcgcggcgcggctgcccgcgctccgcgccctgcgcgcgcgc
atcggcgccgccgacctcgagcagcgcggacacagcaccttcatgcgcgagatgatcgac
actgcggctatactcaggactgccaccccagattcgctcgtgcttgtcgacgaactgggc
agaggcacttccacatatgaaggctgcggcatagcttgggcgatagctgaggaactggcg
acagtatgcaaatgtttctgtctattcgcgacgcactaccacgagttgacgcggctggcg
agcctgcaccccggcgtcattgtcaactcgcacgcggaagcctccgtcgtggatcaacaa
ctggtgcttcttcacaagatcgttcccggtcctgccacggcctccctcggtctgcacgtc
gccaaactggctgatttaccagattctatcatcgagtatgcagaagcaaaacaagcacaa
ttggaaactaatttatttgaaattgaatccgctgtgaagactcaagaaacatccgaaggt
caaaaattaatattggaatttttgaaaaaatgtaaagaagttcaagaatccatcacttca
gataaagatatgatgctagaaattgctaaattaaaagatacattactgaaacataacaat
aagtacgtagaatctctaatagcataa

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