Manduca sexta (tobacco hornworm): 115444127
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Entry
115444127 CDS
T07401
Name
(RefSeq) nuclear pore glycoprotein p62 isoform X1
KO
K14306
nuclear pore complex protein Nup62
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115444127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msex03019
]
115444127
Messenger RNA biogenesis [BR:
msex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115444127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
PCF11_RFEG_rpt
DUF1664
Motif
Other DBs
NCBI-GeneID:
115444127
NCBI-ProteinID:
XP_030025647
LinkDB
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Position
5:3135501..3152965
Genome browser
AA seq
744 aa
AA seq
DB search
MSFNFGSPTTSAGTFGTTTPSTGFSFGGGDANKSLFGGANAESKPAFNFSSTSSAPGGFS
FGAKTTAVTTLFSSPATTTSSLFGASKPLSFGGFSSPPNQTVGSPGFGQPANQNAQPQNM
FGATTQAQAATPAFGTPAIQAAPAFGSPAGGFSFGKPATTTSAFSFNTPTSGFSAPQQAL
TATTSTAPQTTKSGFGTTTASTLSFGSSGFGAKPGAFSFGNNQQAPAFGAAAATTANAAP
AFGTPAQSTFSLVPQTTAQPSSQAGPGATSAPGVGFGSSQAQAAMTPAFGAATSQPAGLA
LAATTQSGFSFGSPAPTSAATGLNLATTQPQPGLNFATTTAQPTQALTFSAATSQPAGLG
FGTSTGQPSAMAPFSAATSQPGAFSFAKTTTPATTSLGFGTTPTSAPSYPATTAQSTGLS
FGATTTAPASTGLSFSAATTAQTSTGLSFGTTTTSTGLGFGVSSAATIQPTTGISFGTTS
APSTQTGLSFSSSASTGLSFGVKSTTTAASSTASTTAPSGITALGKTTTTTMPSLTTAIT
TPALNPPQPIASITFAQLEENINKWTLELEEQERTFINQATQINAWDTLLIANGEKIVEL
NDAVETVKNEQQSLEHELDFVLAQQKELEDLLTPMEKQLLEDNVDRLRDPEREHMYSLAE
NLDTQLRQMSEDLKEVIEHLNETNRSQDSSDPIVQIGRILNAHMSSMQWIDNSIAQISTK
LDQLKATHDTLRRDNERSFQLTYN
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgagttttaattttggaagcccaacaacatcggcgggaacttttggcacaactacccct
tccacaggattctcgtttggaggtggggatgcaaataaatcactattcggaggtgcaaat
gcagagagcaaaccagctttcaatttctctagcacaagctctgcgccgggtggattttca
ttcggagctaaaaccactgccgtaaccactttgttctcatcacctgcgacaactacaagt
tcactgtttggtgctagcaaaccgttgagctttggcggttttagttcaccgcccaatcag
acagttggcagccctgggttcggacagcccgctaaccagaatgcgcagccgcaaaacatg
tttggcgccacgacacaggcacaagccgcaacaccagccttcggtactcccgctatacaa
gctgcacctgcatttggttcgccagctggtgggttctctttcggcaagccggctacaacc
acgtcagcattcagtttcaacacacctacttcagggttctcagcaccgcagcaagctctg
acggctacaacatcaactgctcctcaaacgaccaaatcaggttttggcacaaccacggcg
tcaactttgagcttcgggtccagcggctttggcgccaaaccgggagctttcagtttcggg
aataatcagcaagcgcccgcgttcggtgccgctgcggccactactgctaatgcagcgcct
gcattcggcaccccagctcagtcgacgttcagcctcgtgccgcaaaccacggctcagccg
agcagtcaggccgggccgggcgcgacgtcagccccgggcgttggtttcggctcgtcgcaa
gcccaagctgcgatgacgcccgcattcggcgccgcgaccagccaacccgccggactcgct
ttggccgcgacaacacaatcgggcttcagtttcggcagcccggcgcccacatcggccgcc
accggtctcaacctcgccactactcagccccaacctgggcttaattttgccacaaccacg
gcacaaccgacgcaagcactcacgttcagcgcagcgacgagccaacctgcagggcttggt
ttcggcactagcacaggccaaccatccgccatggctccgttcagtgctgcgacaagtcaa
cccggcgctttcagtttcgccaaaactaccaccccggctacaacgagtctgggttttggt
acgacgccgacctcagcgcccagttatccggctaccacggctcaaagcactgggcttagt
tttggcgcaacgaccacggctccggcatcgactgggcttagtttttccgcagcaaccaca
gctcaaacttcaacggggcttagttttgggaccacgacgacgtcaacgggactcggattt
ggagtaagctcggcggctaccattcagcccacgacggggattagttttggtacgacgtcg
gctccgtcgactcaaactgggctcagtttttcgagtagtgcgtcgactgggcttagtttt
ggcgtaaaatctactacaacagctgcttcctcaacagcttctaccacggccccgtcgggc
atcacggctctcggtaagaccacgaccaccacaatgccatcactgaccaccgctatcaca
acgccagcactaaacccgcctcagccgatagcgtctataacctttgcacagctcgaggag
aacatcaacaagtggaccctggaactggaggagcaggagaggacgttcatcaaccaggcc
acgcagatcaacgcttgggacaccttgctcattgccaacggagaaaagatagtggaactg
aatgatgctgtggagacagtaaagaatgagcagcagtccttagaacatgagctggacttt
gtgttagcgcagcaaaaagagctagaagacctcctcacgcccatggagaagcaactactg
gaggacaacgtggaccgtctacgcgaccccgagagggaacacatgtattcgctggcggaa
aatttggacacacaactgaggcagatgtccgaggatttgaaagaagttattgaacatttg
aacgagactaatagaagtcaggacagcagtgatcctatcgtccaaattggccgcatactc
aacgcccacatgtcttcaatgcagtggatagacaactccatcgcccaaatttcaacaaaa
ttggaccaactgaaggcaacacacgacacactgcgcagggacaacgagagatccttccag
ctcacgtacaactga
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