Manduca sexta (tobacco hornworm): 115444257
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Entry
115444257 CDS
T07401
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115444257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msex03019
]
115444257
Messenger RNA biogenesis [BR:
msex03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
115444257
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
115444257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
Motif
Other DBs
NCBI-GeneID:
115444257
NCBI-ProteinID:
XP_030025818
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All DBs
Position
18:complement(3704549..3706111)
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AA seq
219 aa
AA seq
DB search
MNLEEKIKEIGQICIPGMRLSLASKECVAGPGTYELRGYIYATLAGILKTEEDEKTKVKV
ISVDSPRTPSVLPKTGDIVTAKVTVVNPRVVHCVIMCVGPLVLVRPYRGVLKKEDIKSTD
KDRIDPYKCYRPGDIILARVLPMTEIHWYHLSTAENELGVVMATAEGSPQGVSMVPISWS
EMQCPKTLVKEPRKVARVIPENINHALFPASNGPLKEIE
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagaagaaaaaattaaagaaatcggacaaatatgtattcctggtatgagattg
agcttggcgagtaaagaatgtgttgctggaccgggcacatacgagttacgaggatatatt
tatgccactttagctggaatattaaaaactgaggaagatgagaagaccaaggtgaaagta
atatcagtagatagtccaagaactccaagtgtgctgcccaaaacaggtgacattgtaaca
gctaaagtaacagtagtgaatccacgagtggtgcattgtgtcatcatgtgtgtggggcca
ctggtacttgtcaggccatatcgaggagtattgaaaaaggaggacatcaagtccacggat
aaggacagaattgacccatataaatgttacagacccggtgacataattctggctagagtt
ctaccaatgactgagattcattggtatcacctgtctacggctgaaaacgaacttggagta
gtcatggcaacagcagaaggttcccctcaaggtgtcagcatggtccccattagctggtct
gagatgcagtgccctaagactttggttaaagaacccaggaaagtggctagggtcatacca
gaaaatattaaccatgctcttttcccagcgtctaatgggccattaaaagagattgaataa
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