Manduca sexta (tobacco hornworm): 115444287
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Entry
115444287 CDS
T07401
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03018
RNA degradation
msex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115444287
09123 Folding, sorting and degradation
03018 RNA degradation
115444287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msex03019
]
115444287
03041 Spliceosome [BR:
msex03041
]
115444287
Messenger RNA biogenesis [BR:
msex03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115444287
mRNA degradation factors
5'-3' decay
Lsm complex
115444287
Spliceosome [BR:
msex03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
115444287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Gemin6
Motif
Other DBs
NCBI-GeneID:
115444287
NCBI-ProteinID:
XP_030025873
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All DBs
Position
21:7209778..7210248
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AA seq
96 aa
AA seq
DB search
MASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSSSGVAQVVLGLH
IIRGDNIAIVGQIDESIDSRLDLGNIKAEPLGPIVH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgggtctcgagaactacgtaaaccaaacagtgtcagtgataacttcagatgga
aggaacttcatcggaacgttgaaaggttttgatcaaactataaacataatcctagatgaa
tcgcacgagagagtgttctcgtcttccagtggcgtggcgcaagtggtcctggggctgcac
ataataagaggagacaatatcgcgatagttggacaaatagacgaatctattgatagtagg
ttagaccttggaaacataaaggctgaacctctaggaccaattgtgcattaa
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