Manduca sexta (tobacco hornworm): 115444392
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Entry
115444392 CDS
T07401
Name
(RefSeq) ubiquitin conjugation factor E4 B
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex04120
Ubiquitin mediated proteolysis
msex04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115444392
04120 Ubiquitin mediated proteolysis
115444392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msex04121
]
115444392
Enzymes [BR:
msex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115444392
Ubiquitin system [BR:
msex04121
]
Ubiquitin ligases (E3)
U-box type E3
115444392
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
115444392
NCBI-ProteinID:
XP_030026016
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All DBs
Position
10:4021721..4037809
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AA seq
1234 aa
AA seq
DB search
MSELSQEEIRRRRLARLAALSGAGSTPSSASPPATPSASMLSPDIQSPQPRLSPAPIPRG
STEPSTPDANANREPNFSDAIRSDQSDQTKIPADGLIVTEKTDNNLLDEMADTKMTDLSQ
TRQYSSFDSMGEDTLLSCGSVRVGSLPHSTVGGSEGASTREDSTSRSISPAQFVEPSPVR
PRPTTASPSCSRRSLSMEVDDVSERNSQSESQQEPMEVEENDPSSSPARKIHRSRTVSCT
ELTEDQLRHIVAKILQVSWSDECAGGIFVPSVAASLLDNPKLSLNELASEALMDVITQIG
DGSDPLNQKLIAVSETSKRLNEDCGDDTLTSGPLGSESDPDKSDCPTPSLPIPKNMPTQG
LAVSYILRFYNNINLYEREHPKKSSEPPLSDLLQSLRTLLVNHLVLVLRKGFDLEKCRKS
PLLPYMLVGNTPTGLIPELLLATYQDKEVFEEVFVPLLMGVREEMRRCVSPLAGRGHGAA
LRALRALCELRAGPRHARRPVCELLAALPSLCPDPVTTAPGREIARVSFLGPFFAISLFA
EENPRLAERLFGMGTGDRSLAFALQREIEASRNTLHNICHNILLCPEAREPFLNYFAALL
QMNERRAQLQTDERSLAGDGFMLNVCSVLQLLSVRIKLERVYPLYTFQPDTWVNVRDETR
LYFTAQEAQDWLDSLNNDPCHKWPEAKFQTVCWFLTLHMHHVALIPALHTHQRRIRAYRD
LQKVIEELAVAEPQWRNSFSALRNRELLRRWRRQVKRLHRSKLCAEAALLDGEVMRRSVQ
FYASACALLTSQLSAAQAAQDAAQDAAPGTSAAPAALAFRATPEWYVEDVAEFMLFAVQY
VPQVVADYIEDPIITWLLSAICHSHLIKNPYLVAKIVEVLFVIHLSVPLKMKNVYEKFMN
HPMSQTALPSALMKFYTDIETTGQSTEFYDKFTIRFHISIILKGMWERLIHKQAIVKESR
SGRQFVKFINMLMNDTTFLLDECLTYLKRIHEAQESAATGAAGEARARALAQDERQCRSY
LTLARETVDMLEYLTVEIKEPFLRSELVDRLASMLNFNLQQLCGPKCRNLKVRRPEKYGW
EPRRLLSQLVDIYLHLDSPQFHAALAADERSFRKELFEEAAVRLAKSCIKTPTEIERFRS
LADNAYQIAVSNQQKSDEFADAPEEFRDPLMDTLMTDPVVLPSGKVMDRSVILRHLLNSS
TDPFNRQPLTEDQLRPATELKEKIQQWQREKKMT
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaactgagtcaggaggagatacgaagacgtcgtttggcgcgactcgcggcgctc
agtggcgcggggtccactccctcttcggccagccccccggccacccccagcgcctcgatg
ctctcccccgacatacaaagcccacagcctcgcttgtcacccgcaccgatcccgcgcggt
tccaccgaacccagcacccctgatgctaatgccaacagggagcccaatttctcagacgca
atcagatcagatcagtccgaccagactaaaataccggctgatggattgattgtgacagaa
aaaactgacaataacttgcttgatgaaatggcagacacaaaaatgacagatctttctcag
acaagacagtatagcagttttgattccatgggtgaagacacattattaagttgtggctca
gtgagagtaggcagtttaccacattcaacagttggtggctcagaaggggcatcaacaagg
gaggacagtacatcaaggtcaatatcgccagcccagtttgtagagccgtctccagttcgg
ccgaggcctaccactgcatcaccaagctgttcacgtcggtccttgtctatggaagtggat
gatgtgtcagagaggaactcacaatctgaatcacagcaggagccaatggaggtggaagag
aacgacccgtcgtcatcgccggcccgcaagatccacaggtctcgtacagtcagctgcacg
gagctgaccgaggaccagctacggcacatcgtcgcaaagatactgcaggtgtcgtggtcg
gacgaatgtgctggcggcattttcgtgccatcagtcgcagcgtcgttgctcgacaaccct
aaactatcactaaacgaactagcatctgaagctttaatggatgttatcacacaaataggg
gatggttcagatccgctaaaccaaaagctgatagctgtgtctgagacgtcgaagaggcta
aatgaagactgcggcgacgacacgctgacgagcggtcccctcggctccgagtcggatcct
gataaatctgattgtcccaccccatcgctacctatccctaagaacatgcccacgcaaggt
ctagcagtcagttacattctaagattttacaacaacatcaatctttacgagcgagaacat
cctaagaagagttcggagccgcctttgagtgacctattgcagagtttgagaacattactg
gtgaaccacttggtgctagtgctacggaaagggttcgatctggagaagtgccggaagtcg
ccgctgctgccgtacatgcttgtcgggaacacgcccacgggactcattcccgagcttctg
ctagcgacttaccaggacaaggaggtttttgaagaggtgttcgtgccgctgctgatgggc
gtgcgcgaggagatgcggcgctgcgtgtcgccgctggcggggcgcgggcacggcgcggcg
ctgcgcgcgctgcgggcgctgtgcgagctgcgcgccggcccgcgccacgcgcgccgcccc
gtgtgcgagctgctcgccgcgctgcccagcctgtgccccgaccccgtcaccacggcgccc
ggccgggagatcgcgcgcgtctccttcctcggacccttctttgcgatatcactgttcgcg
gaagagaacccgcgcctcgcagagcgcttgttcggcatgggcacgggtgaccgcagcctt
gcgttcgcgctgcaacgcgagatcgaggcgagtcgcaacacgctgcacaacatctgccac
aacatcctgctgtgtccggaggcgcgcgagccgttcctgaactacttcgcggctctgctg
cagatgaacgagcgacgagcacagctgcagaccgatgagagatcgctcgcgggtgatggc
ttcatgctgaacgtgtgctcggtgctgcagctgctgtcggtacgcatcaagctggagcgc
gtgtacccgctctacaccttccagcccgacacgtgggttaatgtgcgagatgagacacgg
ctctacttcaccgcgcaggaggctcaggactggctcgattcactcaacaacgacccgtgc
cacaagtggcccgaggcgaagttccagacggtgtgctggttcctgacgctgcacatgcac
cacgtggcgctcatccccgcgctgcacacgcaccagcgacgcatccgagcataccgcgat
cttcagaaagtgatcgaggagttggcggtggctgaaccgcagtggcgcaacagtttctca
gcgctgcgcaaccgcgagctgctcaggcgctggaggagacaagtcaaacgtctacacagg
tcgaagctgtgcgcggaggcagccctactggacggcgaggtgatgcggcgcagcgtgcag
ttctacgcgagcgcgtgcgcgctgctgacgtcgcagttgagcgcggcgcaggcggcgcag
gacgcggcgcaggacgcggcgcccggcaccagcgcggcgcccgcggctctcgccttccgc
gccacgcccgagtggtacgtcgaggacgtcgccgagttcatgctctttgctgtgcaatac
gtgccgcaagtagtggctgactacatagaagacccgataatcacgtggttgctcagcgca
atatgccactcgcatctaataaaaaacccatacttggtagccaagatcgtcgaagtccta
ttcgtaattcatctctccgtgccattgaagatgaagaatgtttacgagaagttcatgaac
catccgatgtcacagaccgcgttgccgagcgccttgatgaagttctacacggatattgag
accaccgggcagagcactgagttctatgacaaattcacgataagattccacatcagcatc
atacttaagggcatgtgggagcggctgatacacaaacaggcaatcgtgaaggagtcccga
tcgggccgtcagttcgtcaagttcataaacatgttgatgaatgacaccacgttcttactt
gacgagtgtcttacgtacctgaagcgcatccacgaggcgcaggagagcgcggccaccggc
gccgcgggggaggcgcgcgcacgcgcactcgcgcaggacgagaggcagtgccgctcgtac
ctcacgcttgccagagagacggtggacatgctggagtacctgacggtggagatcaaggag
cctttcctgcgcagcgagctggtggaccggctcgcctccatgctcaacttcaacctgcag
cagctgtgcggacccaagtgcagaaaccttaaggtccgacgtccagagaagtacggatgg
gagcccagacggttgttgagccagctggtcgacatctacttgcatctcgactcgccgcag
ttccacgccgcgctggccgctgacgagagatcattccgtaaagagttgttcgaggaggcg
gccgtacgattagctaaatcttgcatcaagacgcctactgaaatagagcgtttcaggtcg
ctcgcagacaacgcatatcaaattgctgtatcaaatcaacaaaagagcgatgaattcgct
gacgctccagaagaattcagagatccacttatggacaccctcatgactgatcctgtggtc
ttaccctcaggcaaggttatggacagatctgtgatattgcgtcatctgctgaacagttct
actgatcctttcaacaggcagccgctgacagaagaccaattacgtccagctactgaactg
aaagagaagatacagcagtggcaacgtgaaaagaaaatgacgtaa
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