Manduca sexta (tobacco hornworm): 115444571
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Entry
115444571 CDS
T07401
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 13
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
msex
Manduca sexta (tobacco hornworm)
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msex03009
]
115444571
Enzymes [BR:
msex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115444571
Ribosome biogenesis [BR:
msex03009
]
Eukaryotic type
Pre-60S particles
Helicases
115444571
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Helicase_C_2
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
115444571
NCBI-ProteinID:
XP_030026257
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All DBs
Position
4:complement(2488864..2500775)
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AA seq
916 aa
AA seq
DB search
MSKKLHNLKWETVALEGVPTDNLQGFIGLEECTDYGMDRDSKRAKKKKEKEQTKKRKQND
NDLKVVPNKKVKLSNGFIVESCNTTIPSKSNEVIKEPNSKKKKQKKDKNEKKNAINKDNM
NKGNKKVNKPKLGEDITQTQSNLTPEDMLTWAEFKLPESIMKALTELGFKKPTKIQELTL
PAAIHGRRDILGAAETGSGKTLAFALPILSGILKLKEKAEAKGLDVYDIPYKKVSVKKKN
VEEAKEILNNKQRSKGINRKDKKPKINKSAKTNQGKESSEDGYGSGDDSDDQESGDEATN
ADDKSDEEYLEEIEVPLRKKKDLSEEDDSDDENYVHLSEMIDSDDLAESDEQSEQDDNSE
MDDESVDSGEGNEEVVENASGDDVENDESGTDEEAKAENENAGNEKSIGLVKMIDNVEIP
GHVVVKTGKPLYALILTPTRELAIQISRHIIAAAKYTGIRVATIVGGMAAVKQERVLRCG
PEIVVATPGRLWELVNQGQPHLQQLSSVKFLAIDETDRMVERGHFEELQPLLERLNAEES
RRDARQNFVFSATLTMVHELPAHLKGKKVTKRGKILNRKIQKMTPKQKLDRLVKMIGMTD
PKVVDITATNLGTAETLTESRIACSLEDKDPYLYYILRRHPGRTIVFCNSIGSVKRLAQL
LTTLKCKPLPLHANMQQRQRLKNLERFRDDPRGVLVATDVAARGLDVPHVAHVVHYQVPR
TAENYVHRSGRTARARREGLTILMMEPAEAYLYGKLCATLNKTSEVPTFPVPAHSLAPLK
EVVKLARDLDALELRRRRAAQSVGWRDKAAREMDIIVDDDDLPVKQVDPSIDKAIQAKKK
QLEYMLSRPMFPKGFSFKYPTLNDPTALNQPEEKALQVMKKAIESGAIKKDKRRSKNESL
FKLEKAIKKNNKNKKK
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaagctgcataatttgaaatgggagacggtagctttagaaggcgtgccgacg
gacaacctccagggcttcataggactggaagaatgtaccgattacggtatggacagagat
agtaaaagagcgaaaaagaaaaaagaaaaggaacagacaaagaaacgcaaacaaaatgat
aatgacctcaaagtagttccaaacaaaaaagtaaaattatcaaatggttttatagtagaa
tcttgtaatacaacaataccatcaaaaagcaatgaagtaataaaagaaccaaatagtaaa
aaaaagaaacagaaaaaagataaaaatgagaagaaaaatgctataaacaaagataatatg
aataaagggaataaaaaagtaaataaaccgaaattaggtgaagatataacacaaacgcag
tccaatttgactccagaggacatgttgacgtgggcagaattcaaactaccagagtccatt
atgaaagcattaaccgaattgggttttaaaaagccgacaaaaattcaagagttgacttta
cctgcagccatacatggtcggcgagacatcctaggtgcagctgaaactggtagtggtaag
acacttgcctttgctttacctatattatcaggaattctgaaactaaaagaaaaagctgaa
gccaaagggctagatgtctatgacataccatataaaaaggtatcagttaaaaagaaaaat
gtagaagaggcaaaagaaatactgaataacaaacaaagatcgaaaggtataaacagaaaa
gataaaaaacctaaaataaacaaatctgctaaaaccaatcaaggaaaagaatcgtcagaa
gatggatatggtagtggggatgattccgatgaccaagaaagtggtgatgaagcgactaat
gcagatgataaaagtgatgaagaatatttagaggaaattgaagtgcctttgagaaagaag
aaagatttatctgaggaagatgattcagatgatgaaaactatgtacatttgtctgaaatg
atcgattccgatgacttggcggaatctgatgaacagtcggaacaggatgacaatagtgaa
atggatgatgaatcagtagatagtggggaaggtaatgaagaagttgttgaaaatgcctca
ggtgatgatgtagaaaatgatgaatctggaactgatgaagaagctaaagcagaaaacgaa
aatgctggaaatgaaaagagcataggactggttaaaatgatagataatgtggaaatacca
ggtcatgtggtggtgaaaaccgggaaaccgttgtacgccctgatcctgacgccaaccagg
gagctggcaatacagatcagcaggcatatcatagcagcggctaaatacacgggtattaga
gtggcgacgatagtcggcggcatggcagcggtaaagcaggagcgggtgctccgctgcggg
ccggagatcgtcgtggcgactcccggacggttgtgggagctcgtcaatcagggacagccg
catttgcagcaactctcctctgtcaagttcctagcgatagacgagacggaccgcatggtg
gagcgaggccacttcgaggagttgcagccgttgctggagaggctgaacgcggaggagtcg
cggcgcgacgcgcgacagaacttcgtgttctccgccacgctcaccatggttcacgaactg
cccgcgcatttgaagggcaagaaggtgacgaagagaggcaagatattgaacagaaagatc
cagaagatgacgccgaagcagaagctggaccggctggtcaagatgatcggcatgactgat
cccaaggtggtggacatcacagccaccaacttaggaaccgcggagacgctcacagagagt
cgcatagcgtgttctttagaggacaaggacccgtatttgtactacatactgcgacggcat
ccgggcaggaccatcgtgttctgcaactccataggcagcgttaaaaggttggctcaactg
ctcacaacgttgaaatgcaaacctttaccgctacacgcaaacatgcagcagagacaacga
ttgaagaatctagaaaggttccgcgacgacccccgcggcgtgctggtggcgacggacgtg
gcggcgcgcgggctggacgtcccgcacgtggcgcacgtcgtgcactaccaggtgccgcgc
acggccgagaactacgtgcaccgcagcggacgcaccgcgcgcgcccgccgcgagggactc
accatactcatgatggagcccgccgaggcctatctgtacgggaagctctgcgccacgctg
aacaaaacctcagaagtgcccacattcccggtgcctgctcacagcctggcgccgctgaag
gaagtggtaaagctggcgagagacctggacgccctggagttgaggagacgccgcgcggca
cagtccgtaggctggagggataaggcagccagagagatggacatcatcgtagatgatgat
gacttaccagtcaagcaagtggacccgtccatagacaaggcgatacaagcgaaaaagaaa
caattggagtacatgctctcacggcctatgttcccaaaaggattctcgttcaagtacccc
acgttgaacgatcccactgcgctgaatcaaccagaggagaaggctttacaggtaatgaag
aaggcaatagaatcaggagcgatcaagaaagataaaagaagaagcaagaacgaatcttta
ttcaagctagagaaagctattaaaaagaacaataaaaacaagaaaaaataa
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