Manduca sexta (tobacco hornworm): 115444810
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Entry
115444810 CDS
T07401
Name
(RefSeq) TATA-binding protein-associated factor 172 isoform X2
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
msex
Manduca sexta (tobacco hornworm)
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msex03021
]
115444810
Transcription machinery [BR:
msex03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
115444810
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_EF3_N
HEAT_MROH2B_C
HEAT_GCN1
HEAT_GCN1_C
TOR1L1_N
HEAT_EZ
HEAT_2
TPR_DNAAF5
Vac14_Fab1_bd
Motif
Other DBs
NCBI-GeneID:
115444810
NCBI-ProteinID:
XP_030026584
LinkDB
All DBs
Position
12:complement(3355286..3416698)
Genome browser
AA seq
1949 aa
AA seq
DB search
MKSRLDRLFVLLEAGAGPATRRAAARQLGEVQKAHPEELHRLLGRLMKHLRSPAWDTRVA
AAQAVEAILSNVPEWHPTPSAVKKEEKTEPEDNGRLRCDTFDIERVLHHGAHLMGSEGHE
YDLDEEALSSADINDRLAKQRQQLNARLNLDVAASVGVDLSALYTNDDLCPVKTQTNKTE
TARRPVQELMPISSKPLSSREMNLAKRRARAAFSKQKSRDCSEEGPSAPPTPPVEPDRKK
IKLEAIDEYVGDAGEAGAPEADGSWGEAAREAARWPLDAWCGVLQAQLFSAQWEARHGAA
GALRELLRSRLALSAGTHAHLTTQQMEEAHQDWLEDMALRLLCVLALDRFGDFVSDQVVA
PVRETCAQTLGVALAQLSEERVRKVARLLSTLAGQPQWEARHGALLGFKYMLAARQEIAC
ASGALEHLIAGLGDAAEDVSAVAAGALAPAAGALGGARAGAVRGVVARLWRLLRDQDDLA
APANKYMALLAALMALPDTARLLHPIDLADVLPRLWPYLDHSTSSVRKATLQTLRTLTRP
LITKKDTTKLNREDLNGEQPMCVDPSSNGDSTPNGDPKCDQKPNDQPSNGHETPKDQPVD
ENQPNGDQPISDQVKNDQPKSEKIESESKIDSGAQPNGEQTNNELEVDSDQYLMWTPELL
QEAMRHIYQRVLFEHVPEIQDIAVQVWENLLQHASLGVILVAACPMLATWLCLAMQPARL
PIDPGLILQPPPKERRVRTTSLGGTVPPEIRATPRWYVGGADTQPAAARDDAVTRARCRA
ADMLGYLSCYLVQPAPGIEYKPEDESPIDCYVKVMVVYLRSGSALQRLVASLVLAAWARC
STERGMLPPQIHRPPPTEVPSNGHEPQKEENGDKSTEDGDENDISKVIPPLLVDTLHTAL
NQTLYYDEVALNCNRILQEARDLLAMMKHYKLPVDGEEFNNIMRLEQVAHMTTVTQPMVA
AMKLKRVAQTLEERRKSLQTAVNQCTIEQNALNVSVQAGVASAVSWARVPPARRNPVVRP
LMESVKREAAACLQLRSAQALAALAAQLEPARPGPADKVLANLKAFLRCDPEFTPRISLE
HTEENTADSGSGDSGTEGKSESSALTPALDRYQGILTLREQQVSGERTAPRRGRPPAAAA
LQLDALLANEDEAHKLLRIQRRGATLALTSLAEYFGDELPEKLPKLWEFITDPFSKVYTD
SELEQLEVERAEELVSRLQVVEAVVGRVSGALVARVCAGAGAACALSRAVHTALRHMAAR
ALAALAAQQPHQVLPVLIDQLIPALSDVRMERVRCGAVEALARVVEALQLQIVPYVVLLI
IPLLGRMSDQCMAVRVMATRCFATLVQLMPLDGAAPAPPLAPELRARRRQDRRFLDQLFN
PATIPDYKIPVPVSAELRSYQQAGVNWLRFLYEYKLHGVLCDDMGLGKTLQSIVVVAGSH
WEREHQRLPHLPSLVVCPPTLTGHWVFEVMKFIPNKFLKPLQYVGPPIERERLRHQVKYY
NFIVASYDIVRKDIDFFSSIKWNYCVLDEGHVIKNGKTKAFKAIKQIIANHRLILSGTPI
QNNVLELWSLFDFLMPGLLGTERQFTARYSRPILAARDPKATPHQLQAGALACEQLHRQV
LPFLLRRVKEDVLKELPPKITQDYYCELSPLQRRLYEDFSREHMPQDLNNSHTHVFQALH
YLQNVCNHPKLVLTREHPEAGAISQLLHAQNSNLDDIEHSAKLPALKQLLLDCGIGMEGG
GTDIAVSQHRALVFCQLKKMLDIVENDLVRRHLPSVTYLRLDGSVPPHQRHSIVTRFNED
VSIDLLLLTTAVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLIT
RDTLEEKIMSLQKFKLMTANTVISSENAAMETMGTDQLLDLFNLSGGSQQTPQSSRSVLD
TLPELWDDKQYEEEYDMTNFIKGLNKMNA
NT seq
5850 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcgcgattggatcggctattcgtgttgctggaggcgggagcgggtccggcgacc
agacgcgctgctgcccggcagctcggggaggtgcagaaggcgcaccctgaggagttgcac
cggctgctaggcaggcttatgaagcatttacggtcccctgcatgggacactagagttgct
gctgcacaggccgtggaagcgattttatctaacgtgccggaatggcatcccacaccgtcc
gcggtcaaaaaagaagagaagacggagccagaagacaacggtcggctacgctgcgacacg
ttcgacatagagcgagtgctgcaccatggagctcacctgatgggctccgagggtcacgag
tacgacttggacgaggaggcactgtcgtcagctgatataaacgaccgtctggccaagcag
cggcagcagctgaacgccaggctgaacctcgacgtggccgctagtgtgggcgtcgatctc
tccgcgctgtacaccaatgacgacctatgtcccgtcaaaacacagactaacaagactgaa
acggctagaaggccggtccaagagttaatgccgatatcgtcgaagccgctcagttcgcgc
gagatgaacctggccaagcggcgtgcgcgcgccgcgttcagcaaacagaagtcgcgcgac
tgcagcgaggagggtccctccgcgccgcccacgccgcccgtcgaacccgacaggaagaag
atcaaactggaagccattgatgagtacgttggcgacgcgggcgaggcgggcgcgccggag
gcggacgggtcgtggggcgaggcggcgcgcgaggcggcgcggtggccgctggacgcgtgg
tgcggcgtgctgcaggcgcagctgttcagcgcgcagtgggaggcgcggcacggcgcggcg
ggcgcgctgcgcgagctgctgcgctcgcgcctcgcgctcagcgccggcacgcacgcgcac
ctcaccacacaacagatggaggaggcacatcaagactggctcgaggacatggccctgagg
ttattgtgtgttctcgcgttagaccggtttggagacttcgtctcggatcaagtggtagct
ccagtgagggaaacttgtgcgcagacgctcggcgtggcgctcgctcaactgagtgaggag
agagtgcggaaggtagcacgcttgctgtccaccctggcggggcaaccgcagtgggaggcg
cggcacggggcgctgctcgggttcaaatacatgctcgctgctagacaagagatagcgtgc
gcgagcggcgcgctggagcacctgatcgcggggctgggcgacgcggcggaggacgtgtcg
gcggtggcggcgggcgcgctggcgccggcggcgggcgcgctgggcggcgcgcgcgcgggc
gccgtgcgcggcgtggtggcgcgcctgtggcgcctgctgcgcgaccaggacgacctcgcc
gcgcccgccaacaagtacatggcgctgctcgccgcgctcatggcgctgcccgacaccgcg
cgcctgctgcatccaatagacctggccgatgtcctgcctcgtctctggccttatctcgac
cactccacgtcatccgtccgtaaagcaacactacaaactctgcgcacgttaacgcgacca
ctaataaccaaaaaagataccaccaaacttaacagagaagatctgaacggagaacagccg
atgtgtgttgacccgtcttctaacggcgacagcactcctaacggtgatccaaaatgtgac
caaaagcccaatgatcaaccctcaaacggacacgaaacacccaaagatcaaccggtagat
gagaaccaaccaaacggtgaccagcctattagtgaccaagtgaaaaatgaccagccaaaa
agtgagaagatagaaagtgagtcaaagatagacagcggtgcccagcctaatggggagcag
acaaataatgagttagaagtagacagcgaccaatatttgatgtggacgccggagttactg
caagaagccatgaggcacatataccaaagggttctatttgaacatgtacctgaaatacaa
gatattgctgtgcaggtgtgggagaatttactacaacacgcgtcgctgggcgtgatactg
gtggcggcgtgtcccatgctcgccacgtggttgtgtctcgccatgcagcccgcgcggtta
cccattgaccctgggcttatactacagccaccccctaaggagcggcgcgtgcgcaccacg
tcgctgggcggcaccgtaccgcccgagatccgcgcgacgccgcgctggtacgtgggcggc
gccgacacgcagcccgccgccgcccgcgacgacgccgtcacgcgcgctcgctgccgcgcc
gccgacatgctcggttacctatcatgttacttggtacagccagcgcccggtatcgaatac
aaaccagaagacgagagccccatagactgttatgtgaaggtgatggtggtatacctgcgg
tcgggcagcgcactgcagcggttggtagcgagcctggtgctggccgcgtgggcgcgttgc
agcactgagcggggcatgctgccgcctcagatacatcgcccgccacccactgaagtaccc
agtaatggacatgaaccacagaaagaagaaaacggcgataaaagtacagaagatggcgat
gagaatgacatatcgaaagtgatccctccgctgctggtcgacacgctgcacaccgcgctc
aaccaaacgctgtactacgacgaggtcgcgttgaactgtaacaggatactccaagaagct
cgtgatctcttagcgatgatgaaacattacaaactgccagtcgacggagaagagttcaac
aatattatgagattagaacaggtggcgcacatgacgacagtgacgcagccaatggtggcc
gcgatgaagttgaaacgcgtcgctcagacacttgaagagaggcgcaagagtctgcagacc
gctgtcaaccaatgtaccatagagcagaacgcccttaacgtgtccgtgcaggcgggcgtg
gcgagcgcggtgtcgtgggcgcgcgtgccgccggcgcggcgcaaccccgtggtgcggccg
ctcatggagagcgtgaagcgcgaggcggcggcgtgcctgcagctgcgctcggcgcaggcg
ctggcggcgctggcggcgcagctcgagcccgcgcgccccgggcccgccgacaaggtgctc
gccaacctcaaggccttcctcagatgtgacccagagttcacgccccggatatcgctggag
cacacggaggaaaatactgcagactccggcagcggcgactccggcacggagggcaagagt
gaatccagcgcactcactccagcgttggacagataccaaggcatcctgacgctgcgcgag
cagcaggtgagcggggagcggaccgcgccgcgccgcggccgcccgcccgccgccgccgcg
ctgcagctcgacgcactgctcgccaacgaggacgaggctcataaactactaaggatacag
cggcgaggcgccaccttagcgctgactagcctcgctgagtacttcggcgacgaactgccc
gagaagctgccaaagttgtgggagttcattaccgacccgttctcaaaagtttacactgac
agtgagctggagcagctggaggtggagcgcgcggaggagctggtgtcgcggctgcaggtg
gtggaggcggtggtggggcgcgtgtcgggcgcgctggtggcgcgggtgtgcgcgggcgcg
ggcgcggcgtgtgcgctgtcgcgcgcggtgcacacggcgctgcgccacatggccgcgcgc
gcactcgccgcgctcgccgcgcagcagccgcaccaggtgctgcccgtgctcatcgaccag
ctgatccctgcgctgagcgacgtccgcatggagcgcgtgcgatgcggcgccgtcgaggca
ctcgcgagagttgtcgaggcgctgcagctgcagatcgtaccgtacgtcgtgttactcatc
ataccattgttaggccgcatgagcgaccagtgcatggcggtgcgcgtgatggcgacgcgg
tgcttcgcgacgctggtgcagctgatgccgctggacggcgccgcgcccgcgccgccgctc
gcgccggagctgcgcgctcgccgccgccaggaccgccgcttcctcgaccagctcttcaac
cccgccaccatccccgactacaagatccctgtgcccgtctccgccgagctcagatcatat
caacaggcgggtgtgaactggttgcggttcctttacgagtacaaactccatggcgtgcta
tgtgatgacatgggtcttggcaagacgctgcagtctatcgtagtggtcgcagggtcccat
tgggagcgagagcatcaacgtctaccgcatctgccctcgctcgtcgtgtgtcctcccacg
cttacgggtcactgggtgttcgaagtgatgaaattcatcccaaacaagttcctcaagccg
ctccaatacgtcggcccaccgatcgagcgagagcgattgcgtcatcaagtgaaatactat
aactttatcgtcgcgtcgtacgatatcgtgaggaaggatatcgatttcttcagcagtata
aagtggaactactgtgtattggacgaggggcatgttataaagaatggaaagacgaaagcg
ttcaaagcgattaagcagatcatcgccaatcatagactgatactgtccggtacacctata
cagaacaacgtgctggagttgtggtcgctgttcgacttcctgatgccgggtctactaggt
acggagcggcagttcacggcgcggtactcgcggcccatcctggcggcgcgcgaccccaag
gccacgccgcaccagctgcaggccggcgcgctcgcctgcgaacagctgcaccgacaagtg
ttacctttcctgttacggcgtgtcaaggaggacgtcctgaaggagctaccgccgaagatc
acgcaggactactactgcgagctgagcccgctacagcggcgcctgtacgaggacttctcc
agagaacacatgcctcaggatctgaacaacagtcacacgcatgtcttccaggctctccac
tacctgcagaacgtgtgcaatcaccccaagctggtgctgacgcgcgagcaccccgaggcg
ggcgccatctcgcagctgctgcacgcgcagaactcgaacctcgacgacatcgaacactcc
gccaagctgccggcgctcaaacaattgctgttagactgcggcatcggcatggaaggcggc
ggcacggatatcgccgtctctcagcaccgtgcgctggtcttctgccagttgaagaagatg
ttggacatcgtcgagaacgacctggtgcgccgccacctgccgtccgtcacgtacctgcgg
ctcgacggctccgtgcctccgcatcagagacactccatcgtcacgcggtttaatgaagat
gtctctattgacctactgctgcttactactgcggtgggcggtctcggtttgaatctgacc
ggcgctgacacagtgatcttcgtggagcacgactggaacccgatgaaggacctgcaggcg
atggaccgcgcgcaccgcatcgggcagaagaaggtggtcaacgtgtaccgactcattacc
agggacacgctcgaggagaagataatgagcctacaaaagttcaaactaatgacagcgaac
acagttataagcagcgagaacgctgcaatggagacgatgggcacggaccagctgttagac
ctgttcaacctgagcggcgggtcgcaacagacgccgcagtcgagccgctcggtgctcgac
acgctgccggagctgtgggacgacaagcagtacgaggaggagtacgacatgaccaacttc
atcaagggcttgaacaaaatgaacgcttag
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integrated database retrieval system
