Manduca sexta (tobacco hornworm): 115444823
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Entry
115444823 CDS
T07401
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex04140
Autophagy - animal
msex04142
Lysosome biogenesis
msex04145
Phagocytosis
msex04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
115444823
04142 Lysosome biogenesis
115444823
04140 Autophagy - animal
115444823
04148 Efferocytosis
115444823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msex04131
]
115444823
Membrane trafficking [BR:
msex04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
115444823
Hops complex
115444823
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
zf-RING_Vps41
zf-RING_UBOX
zf_RING_Vps8
zf-C3HC4_2
zf_RING_Vps8_fungal
zf-RING_5
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
115444823
NCBI-ProteinID:
XP_030026611
LinkDB
All DBs
Position
12:complement(3154749..3164818)
Genome browser
AA seq
987 aa
AA seq
DB search
MTSILDQYEQASQSTQRVKTPAEPMISSGYINMQLDDNVPMFSKQKMKLSPTDLITHAAV
SSDNLVLAMANGRLFRLDLKAPDCETEIHYTKFVQANSKLTGLFLDPLGYHLLMAFAAKT
KDGYPELVYLHQKSMKLKSVSKSRSYEVTEVGWNSENTSSTTTGPILLGTSQGHILETEL
EANSDRMFTASEQYWKQLPSYLPLYGTREIDGLIFDIGKGQDTPITGIQFHRVGSTSKYF
IFVTTPTRLYQFIGHAIVTDDKPSLQSVFYAYLTIPETGFQEIPSTLKYSKLQFFFDTNN
KPKTFAWLTEPGIFYGQLDPTSQQNSNSLVTQGSLINYPSGPDGKESAPLSFVLTEFHAV
LMYSDRVKVVSLLNQELVHEDIFPEVHGKLKTIIRDVIKRTIWVFTDKTVYRYKVIREER
NLWRIYSDKEEFDLAKQYCQNNPAFLDMINVKQAELLFSKGEYKSSAEVFAETQRSFETI
CLKFLECDQIDALKVYLTKRLQSLTSEDKTLISMIVIWMTELYLSQLGLLRRTGKENSVE
YKVIQTDLEQFLAQPKVADCMQHVKSVIYDLMSSHGDKQNLLKLTIMNEDHENVVAQYIY
RKNYLGAINTLQSLKKPELFYQFAPVLMEESPKHFVNALISQGARLNPAKLLPAFLSCQN
DATHVSEVTRYLEFMLQHFNVKNMAIHNYLLTLYAEHDHLALMRYLAREGQNISLVNFDV
HYALRLCREKNLSEACVNLSALLGLWESAVELALQVDVALAKSVANMPEDDEMQKQLWLN
IAEHVITKNQDLKEAMRFLEECPHIKIEDILPFFSDVVTIDHFREPICQSLQEYNNQIEE
TKAEIEEATKSAEYVRAEIHSFRNRSVRVCVTAECCLCHITLLLRPFYLFPCGHNFHSDC
LTGEIMPILSQARRNQLNELQTQLRLRTNIELSTETSTGLPYREVLKNEIDDIVASECIF
CGEYMINCIDKPFIADEDWDRVMKEWE
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaattttggatcagtacgagcaagcatcgcagtccacgcagcgcgtaaaaact
cccgctgaacccatgatatcgtctggatacatcaatatgcagttagatgacaatgtaccc
atgttttctaaacagaaaatgaagttgagtccgacggatttgataactcatgcggcggtc
tccagcgataatctggtacttgccatggccaacggcagactcttcagacttgacctgaag
gctccagactgtgaaactgaaatccactacacaaagttcgtgcaagcgaattcgaagctc
actggattattcttggatcccctagggtaccacctcctcatggctttcgcagcgaagacc
aaggacggttaccctgaactggtgtacctacatcagaagagtatgaaattgaaatctgtc
agtaaatctcggagttacgaggtgacggaagtagggtggaacagcgagaacacatcttcg
actactactgggcctatactgctaggcacctctcaaggtcatatcctggagacagagctg
gaagccaacagcgatagaatgttcacagctagtgaacagtattggaaacagctgcccagc
tatctgccactgtacgggacgagagagattgacggattgatattcgacatcggtaaaggc
caagacacgccaatcacagggatacagttccacagagtgggaagcacatccaaatacttc
atatttgttaccacacccacccgtttataccagtttataggtcacgctatagtgactgat
gataagccgtcgctacaatccgtcttctacgcgtacctgaccatcccggagacgggcttc
caagagatcccctcgaccctgaagtactccaagttgcagttcttcttcgacaccaataac
aagccgaagacgtttgcttggttgacggagcccggtatattttatgggcagttggatcca
acttcgcaacaaaattccaactccctagtgactcaaggctccctcatcaactatccctca
ggacccgatggtaaggagagcgcgccactgtcttttgtccttacagagttccacgcagta
ctcatgtactccgacagagtcaaagtggtctctctcctaaaccaagagttggttcacgaa
gacatcttccccgaagtgcacgggaaattgaaaacgataatcagggacgtcataaagaga
acgatatgggtcttcaccgacaagactgtgtaccgatacaaagttataagagaagagcgg
aatctctggcgcatatactccgataaagaggaattcgatctcgccaaacagtactgccag
aataatcctgcatttctggacatgatcaatgtaaaacaagctgaactattgttctccaaa
ggcgaatataaaagtagtgccgaagtgttcgcggaaacacaaaggagcttcgaaactata
tgtctaaagttcttagagtgtgatcaaattgacgccctgaaggtgtacttaacaaaaaga
ctccaatcactcaccagtgaagacaaaaccttaatatccatgatagttatttggatgacg
gagctgtatttatctcagctggggctgctgcgccgcaccggcaaagaaaacagcgtggag
tacaaagtaatacagactgatttggaacagttcctcgcccagccgaaggtggcggattgc
atgcagcacgtgaagtcagtcatatacgatctgatgtcgtcgcacggagacaaacagaat
cttttaaaactgacgatcatgaacgaagaccacgagaacgttgtggcgcagtacatatac
aggaagaattatctgggcgcgatcaacactttacagtcgttgaagaagccagaattgttc
taccagttcgcgccagttctgatggaggagtcgccgaagcatttcgtgaacgcactgata
tcgcagggcgcgaggttgaatccagcgaagctattaccggcgttcctgtcatgtcagaat
gatgcgacgcacgtgtcagaagtcacgcggtacttggagttcatgctgcagcactttaac
gtgaagaacatggcgattcataactacctgctgacgttatacgcggagcacgatcatttg
gctctgatgaggtatctggcgcgcgagggacaaaatatatcgctcgtcaattttgatgtt
cactacgctttaagactatgccgcgagaagaacttgtcggaggcgtgcgtgaatctgtcg
gctttgttgggcctgtgggagtccgcggtggagttggcgctgcaggtggacgtggcgctg
gccaagagcgtcgccaacatgcccgaagacgacgagatgcagaaacagttgtggctcaat
attgccgagcacgtgataacaaagaaccaggatctgaaggaagccatgaggttcctggag
gaatgtccacacatcaagatcgaggacattctaccgttcttcagcgatgtggttaccatc
gatcatttccgggaacctatatgccagtctctgcaggaatataataaccaaatagaagaa
acgaaagccgaaatagaagaagctacgaagtcggcggaatatgtccgcgcagagatccat
tcgttccgcaaccgcagcgtgcgcgtgtgcgtgacggcggagtgctgcctgtgtcacatc
acgctgctgctgcggcccttctacctgttcccctgcggacataacttccacagcgactgc
ctcaccggcgagatcatgcctatactcagccaggcgcgtcgcaaccaactaaacgaatta
caaacacagctgcggttacggaccaacatagagttgtccacagagaccagcaccgggcta
ccttaccgtgaggtgctcaagaacgaaatagatgatattgttgcgagcgaatgtatcttc
tgtggcgaatacatgatcaactgtatagacaagccgttcatcgcagatgaggattgggac
cgggtcatgaaggaatgggagtga
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