Manduca sexta (tobacco hornworm): 115445152
Help
Entry
115445152 CDS
T07401
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115445152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msex03021
]
115445152
03036 Chromosome and associated proteins [BR:
msex03036
]
115445152
Transcription machinery [BR:
msex03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
115445152
Coactivators
SAGA/TFTC/STAGA complex
115445152
Chromosome and associated proteins [BR:
msex03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
115445152
STAGA complex
115445152
TFTC complex
115445152
SAGA complex
115445152
SLIK complex
115445152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
TFIID_NTD2
Beta-prop_EML
WDR55
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_SPT8
NBCH_WD40
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WD40_RFWD3
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_EIPR1
WD_LRWD1
Beta-prop_IFT122_1st
GDPD
Motif
Other DBs
NCBI-GeneID:
115445152
NCBI-ProteinID:
XP_030027166
LinkDB
All DBs
Position
21:3048842..3054112
Genome browser
AA seq
653 aa
AA seq
DB search
MSLIKKTRNDAIKAAVNSYLERRNYPDVDVFSNNSHIQSAEQMAVATIVQCEASRANSIL
FSCINNDSGQYDVQYTRLVNFIKDIKIEKVKNELLGLLSPLLCHMYLEMLRGGHGGAAQM
FLKRHSATLPQKDLSYHQPIDGNLPSALYRPNSLEQLFNSLQNGTIDNETPEKDYMNQIL
DDIASIYTLQEIETRPTIAAFRSCKYDIYLSQDALNLLKAYLAKHGHVLLIQVLQTWFHI
DINNDTNKKNSEDEEEMEEEVNVTRNDFDDRAMDANDVFAKCNGHAEYQSVDKELRDLQD
AIKGVRESMAPLKLYKISAPDTQLVCAKTDPNCNILCGGFSNSEVRLWDLGQNNVKRRVN
RNISEFELACYMQPEPSPDDNTLQIGAGLPLRGHSGPVQDVCVLPREELILSASYDNTMR
AWRLSDYSCAALYRGHNYPIWCMDVSKSGLFVVTGSNDRTAKLWSLNRTFPVRVFVGHLS
DVTCVKFHPNEVYIATGGADRSVRLWSVCDARLMRVLCGHRGVVRTLAFAPSGSYLASAG
DDKKIKVWDLAACTCVHEYRGHHGKVTALDWSAIGKSSLTNRMVPDPSDLPTENSLLCSA
GMDGIVKVVCDSYSKNKQMSNQEVLSSTYNTKCTYLVDVQVHPEWVVAIGTKR
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgtccttaattaagaaaactagaaatgatgcaattaaggctgctgttaattcctattta
gagcgaagaaactatccggacgtggatgtgtttagcaacaattcccacattcaaagtgct
gaacaaatggctgtggcaactattgtgcagtgtgaagccagtcgcgccaactcaatttta
ttttcctgcatcaataatgattccggacaatacgatgttcaatatacaagattggtcaat
ttcataaaagatataaaaatagagaaagtaaaaaatgaacttctcgggttattaagccct
ttgctatgtcacatgtacttggaaatgttacgcggtgggcatggaggagcagctcaaatg
tttctaaaaagacattcagcaacattgcctcaaaaagatttatcctatcaccaaccaatt
gatggtaacttgccatctgccttgtacagacccaacagccttgagcaactcttcaactca
ctacaaaatggtaccatagataatgaaactccagaaaaagattacatgaaccaaatattg
gatgatattgcatctatatacactttacaggaaattgaaactaggccaactatagctgct
ttcagatcttgcaaatatgacatatacttatcacaggatgcacttaatttattaaaagca
tatctggctaaacatggacatgtgctactaatacaagttttacagacttggtttcatatt
gacataaacaatgacactaacaagaagaattcagaagatgaagaggaaatggaagaagaa
gtgaatgttactagaaatgattttgatgatagagcaatggatgcaaatgatgtatttgca
aaatgcaatggacatgcagaatatcaaagtgttgacaaagaactgagagatctacaagat
gcaataaaaggagtgagggaatcaatggcacctcttaaactgtacaaaatatctgcacct
gatactcaattagtatgtgcaaaaacagatcccaactgcaacatattgtgtggaggattt
agcaattcagaggtaagattatgggatcttggacaaaacaatgtcaaaaggagagtcaat
cgcaatatatcagaatttgaactagcatgttacatgcaaccggaaccctcaccagatgac
aacactttacaaattggtgctggcttgccattaagaggtcattcaggtcctgttcaagat
gtttgtgtgcttcctcgagaagaactgattttatcagcctcatatgacaatacaatgaga
gcctggaggctttctgattattcatgcgctgcactgtatagaggtcacaactatcctatt
tggtgcatggacgtgtcgaaaagtggactttttgttgtaaccggttctaatgatcgaact
gctaagctttggtcgttgaatagaacatttcccgtaagagtatttgttggacatttatcg
gatgtaacgtgtgtgaagttccatccaaatgaggtgtacattgctacaggcggagctgat
cgaagtgtacgtttatggagtgtttgtgatgcacgtttgatgcgtgttctttgtggtcac
agaggtgtagtgagaacacttgcttttgctccttcaggatcatacttagccagtgctggt
gatgataaaaaaattaaagtttgggacttggctgcttgcacatgtgtgcatgaatatcga
ggacatcatggcaaagtgactgcacttgactggtcagcaataggaaaatctagcttaaca
aacagaatggtgccagatccaagtgacctacctacagaaaactcgctactatgttctgca
ggcatggatggcattgttaaagtagtttgcgacagctattcaaaaaataagcaaatgtct
aatcaagaagtcttatcctccacatacaacaccaaatgcacatatttagttgatgtgcag
gttcatcctgagtgggtggttgccattgggaccaaaagataa
DBGET
integrated database retrieval system
