Manduca sexta (tobacco hornworm): 115445184
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Entry
115445184 CDS
T07401
Name
(RefSeq) probable ATP-dependent RNA helicase pitchoune
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
msex
Manduca sexta (tobacco hornworm)
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msex03041
]
115445184
03009 Ribosome biogenesis [BR:
msex03009
]
115445184
Enzymes [BR:
msex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115445184
Spliceosome [BR:
msex03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
115445184
Ribosome biogenesis [BR:
msex03009
]
Eukaryotic type
90S particles
Helicases
115445184
Pre-60S particles
115445184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
AAA_30
Motif
Other DBs
NCBI-GeneID:
115445184
NCBI-ProteinID:
XP_030027233
LinkDB
All DBs
Position
21:complement(6230570..6236141)
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AA seq
614 aa
AA seq
DB search
MPTPDKILMRKIKKREKRKLKLISQKTKESTEKTSEPENVSEKDVKKRPLESKENGQVPK
KKKKKEKPQVKEEPVEIKEEKEDPENDASEEENETENKTDNENQLPGSSLCLGILSDQKF
SSLEGTVCEATLMGIKDMGFTTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAID
LIYKLKFKPRNGTGVIILSPTRELSMQTFGVLMELMKYHHHTYGLVMGGANRSTEAQKLS
KGINILVATPGRLLDHLQNTPDFLYKNLQCLVIDEADRILEIGFEEEVKQIIKLLPKRRQ
TMLFSATQTKKTEALTALALKHEPVYVGVDDHREQATVDSLEQGYIVCPSERRMMVLFTF
LKKNRKKKVMVFFSTCMSVKYHHELFNYIDLPVMSIHGKQQQTKRTTTFFQFCNAESGIL
LCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGLGTSGHALLFLRPEELGFLR
YLKQSKVTLNEFEFSWNKVADIQLQLEKLISRNYFLNQSAKEAFKSYLRAYDSHHLKTIF
DIDTIDLAKVSKSFGFTVPPAVELKVANKGPPQKRKGGGGYGYFKSLNAPANSQKKTEKT
KIYRQKGNNKKFVR
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgcctactccagataaaatacttatgagaaaaataaaaaagcgtgagaaacgcaaatta
aagttaatttcacagaaaacaaaggaaagtaccgaaaaaacatcagaaccagagaatgtt
tctgaaaaagatgtaaagaagaggcctcttgaaagtaaagaaaatggacaagtacccaag
aagaaaaagaaaaaagagaagcctcaagtaaaagaagagccagttgaaataaaagaggaa
aaagaagacccagaaaatgatgcatctgaggaggaaaatgagacagagaacaaaaccgat
aatgaaaaccagttaccaggatcaagcttgtgcttaggcatactttctgaccaaaagttc
tcatcattggaaggaacagtttgtgaagcgacacttatgggaataaaagatatgggtttc
acaactatgacggaaatacaggctaaagctataccgccactgttggagggaagagattta
gtgggagcggctaaaacaggatcgggaaaaacattggcattcctcataccagctattgat
cttatttataaattgaaattcaagccaagaaatggcaccggtgtgataatcctgtctcca
acaagggagttatctatgcaaacatttggagtgctcatggagttaatgaaataccatcac
catacatacggactggttatgggtggtgccaatagaagtacggaagcacagaaactttca
aaaggcataaatatattagtagcaacacctggacgtttgctagatcacttgcaaaacacg
cctgatttcttgtacaaaaatctacaatgtcttgtcattgatgaagctgataggattttg
gagattggttttgaagaggaagtcaagcaaatcatcaaattgttgcccaaacgtcgccag
acaatgttgttcagtgccacgcaaactaagaaaactgaagcacttacagcgcttgcatta
aaacatgaaccggtttacgtaggtgttgacgatcaccgggaacaagctactgttgattct
ttggagcaaggctacatagtttgtccatccgagagacgtatgatggtattattcacattt
ttaaaaaagaacagaaagaaaaaagtaatggtgttcttctcaacttgtatgtctgttaaa
tatcatcatgaactcttcaactatattgatctacctgtcatgtccatacatggtaaacaa
cagcaaacaaaacgtacaacaacattcttccaattttgtaatgctgaatctggcatacta
ttgtgtacggatgttgctgcaagagggcttgacattccagctgtagactggatcgtgcag
tatgaccctccagacgaccctaaggaatatatccaccgtgtaggtaggactgccagagga
ttgggaacgagcgggcacgctctattgttcttgcggcctgaagaactcggcttcttaaga
tatttgaagcagtctaaagtaacgttgaacgaattcgagttctcttggaataaagttgcc
gacatacagttgcagcttgagaaattgatatcaagaaattatttcctaaatcagtctgca
aaggaagcgttcaagagctatttacgggcttatgactcgcatcacctgaaaaccattttc
gacatcgacacaattgatttggcgaaagtttcaaaatcttttggtttcacggtaccacca
gctgttgaactcaaagtagcaaataagggaccaccccagaagagaaagggaggcggcggc
tacggctatttcaaatctcttaacgcccctgcaaatagtcaaaagaaaacagaaaaaact
aaaatatacaggcaaaaaggaaacaacaagaagtttgtaagatga
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