KEGG   Manduca sexta (tobacco hornworm): 115445186
Entry
115445186         CDS       T07401                                 
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
msex  Manduca sexta (tobacco hornworm)
Pathway
msex03030  DNA replication
msex03410  Base excision repair
msex03420  Nucleotide excision repair
msex03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:msex00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    115445186
   03410 Base excision repair
    115445186
   03420 Nucleotide excision repair
    115445186
   03430 Mismatch repair
    115445186
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:msex03032]
    115445186
   03036 Chromosome and associated proteins [BR:msex03036]
    115445186
   03400 DNA repair and recombination proteins [BR:msex03400]
    115445186
DNA replication proteins [BR:msex03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    115445186
  DNA Replication Termination Factors
   ELG1-RFC complex
    115445186
Chromosome and associated proteins [BR:msex03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    115445186
DNA repair and recombination proteins [BR:msex03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     115445186
  Check point factors
   HRAD17(Rad24)-RFC complex
    115445186
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_lid_RFC1 AAA_14 AAA_22 AAA_assoc_2 RCF1-5-like_lid AAA_11 RuvB_N AAA_5 DUF815 AAA_16 AAA_7 PhoH AAA_30 DEAD ResIII nSTAND_NTPase5 AAA_19 bpMoxR Mg_chelatase AAA_24 Sigma54_activ_2 DUF7632 AAA_3 Gp44_lid ATPase_2
Other DBs
NCBI-GeneID: 115445186
NCBI-ProteinID: XP_030027239
LinkDB
Position
14:8791481..8797190
AA seq 334 aa
MTVGETSKNLPWVEKYRPSKLEDLVSHDDIINTINQFMKENQLPHLLFYGPPGTGKTSTI
LACAKQMYTPQQFNSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAM
TNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLNHKQIVPRLRQIA
DQEGVNMSEDGMKALLTLSGGDMRKVLNTLQSTWLAYRHVTEDNVYTCVGHPLRSDINNI
LNMLLNENDFVTCFKQIQDLKIAKGLALNDILTEIHTIIQRVKLPPEVLVGLLIKMADAE
ARLASGCSERIELAALIAAFQTARDQVKIDVDAS
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgactgtcggagaaacaagtaagaatttaccttgggttgagaaatatcgtccatctaag
ctagaagatttggtatctcatgacgatataataaatacaataaatcagtttatgaaggag
aatcaactaccacatctcttgttctatgggccgcctggaactggtaaaacatcaacaata
ttagcctgcgccaaacaaatgtacacaccacaacaatttaactccatggtactggagtta
aatgcttcggatgaccgtggtattgggatagtgcgaggacagatactcagttttgcatcc
acaagaacaatatttaaggctggcccaaagttgataattttagatgaggcagatgctatg
actaatgatgctcaaaatgccttaagaagaattatagagaagtatacggagaacgtccgt
ttctgcataatttgtaactacctgggcaagataatcccggcgctgcagtcgcgctgcaca
cggttccggttcgcgccgctcaaccacaagcagatcgtgccgcggctgcgacaaatcgcc
gatcaggaaggcgtgaacatgtcagaagacgggatgaaggctttgctgactctctcagga
ggcgacatgagaaaagtcctgaacacactgcagagcacgtggctcgcttaccgtcacgtc
acagaggacaacgtgtacacgtgtgtgggacatccgctgcgatcagacatcaacaacata
ctaaacatgttgcttaacgaaaatgattttgttacatgttttaaacaaattcaagaccta
aaaattgctaaaggattggctctcaacgacattcttacggaaatccacaccatcatacaa
agagtaaaattaccaccggaagttctagtgggtctgctgatcaagatggcggacgcggag
gcgcggctcgcgagcggctgcagtgaacgcatcgagctggccgcactcatcgccgccttc
cagaccgccagggatcaggtcaaaatagacgtggacgcgtcataa

DBGET integrated database retrieval system