Manduca sexta (tobacco hornworm): 115445208
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Entry
115445208 CDS
T07401
Name
(RefSeq) ATP-dependent RNA helicase DDX18 isoform X1
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
msex
Manduca sexta (tobacco hornworm)
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msex03041
]
115445208
03009 Ribosome biogenesis [BR:
msex03009
]
115445208
Enzymes [BR:
msex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115445208
Spliceosome [BR:
msex03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
115445208
Ribosome biogenesis [BR:
msex03009
]
Eukaryotic type
90S particles
Helicases
115445208
Pre-60S particles
115445208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
115445208
NCBI-ProteinID:
XP_030027269
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All DBs
Position
21:6217643..6230345
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AA seq
461 aa
AA seq
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MSIDDVIAKSSFSMLEGKIDARILKVLKSMGFERPTRIQAETLPHLLQQKDLIGAAKTGS
GKTLAFLIPIVDNLIKHKITQKHGTFCIILSPTRELALQTFDVLTKLLVEIDLSHCLIVG
GEKKAKDVIKLQKGANIVVSTPGRLLDHMQNTEKFNFKNLKHLIVDEADKLLEAGFEKHV
NGIVQLLPTNRQTVLFSATIDSKVKNLARLALRNNPVHISVKDDTISTVSRLQQGYCICP
VEQRLAWLYKMLKKSKKFKVMVFFSSCKSVDFHYEFFKMHCKATVLSIHGKQSQARRKEA
YHSFIKAKNGALFCTDVAARGLDIPCVDWIVQYDPPTDPKEYIHRVGRTARGLNNKGNAV
ILLRPEEEEFVKFLEKEKVYLDKYSFGDPPGEVQEMVEDIVIKNGVFKILARKAFLSFLR
CYNKHPLNKIFNINNMDLKSAAKAFGFREQPDVDFLNNKKR
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgagtatagatgatgtaatagcgaaatcttcgttttctatgttggagggtaagatagac
gcccgaatccttaaagtattaaaatcaatgggattcgaaagacctacgcgaattcaagcg
gagactttaccccatttgctgcagcaaaaggacctcatcggtgctgcaaaaactggaagt
ggaaaaaccttagcgtttcttatacccatagtagacaatttgattaaacataagataact
caaaaacatggtacattctgtataattctgtctcctacccgtgagctggcactgcaaaca
tttgatgtacttacaaagctgctagtcgagattgatttatcgcattgtttaattgttgga
ggtgagaaaaaggctaaggatgtgataaagctacaaaaaggtgcaaacatcgtagtaagc
actcccggtcgtttattagaccatatgcaaaatacggaaaaattcaatttcaaaaatcta
aaacatttgattgtggatgaggctgacaaattgcttgaagcaggttttgagaaacatgtc
aatgggatagttcagttgctgccaacaaataggcaaacagtactctttagcgctactatt
gatagcaaagttaagaatttagcaagattagcgttaagaaataatcctgtgcacatctct
gtcaaagatgacacaatatcaacagtgtcaagattgcagcaagggtattgtatatgtcct
gtagagcaaagactggcatggttatacaaaatgttaaagaaaagtaaaaagttcaaagtc
atggtgttcttttcatcatgtaaatcggtagacttccattatgaattctttaaaatgcat
tgtaaagcaacagtattgagtatacatggtaaacagagtcaagctagaaggaaagaagcg
taccatagtttcataaaagcaaaaaacggagcattattttgcacagatgtagctgcaagg
ggcttggatattccatgcgtggattggattgtacagtacgacccacccactgaccctaag
gagtatattcatcgagtaggtcgcactgcccgtggattaaataataaaggaaacgcagtt
atcttactcaggccagaagaggaagaatttgtaaagtttttggaaaaagaaaaagtttat
ttagacaaatattcgtttggtgatcctccaggcgaagttcaagaaatggtagaagatatt
gtaattaaaaacggggtgtttaagattttagcgagaaaagcatttctttcatttttgagg
tgttacaacaaacaccctttgaataaaatttttaacataaataacatggatttgaaatca
gcggcaaaagcattcggttttcgggaacagcccgacgtcgacttcctaaacaacaagaag
aggtaa
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