Manduca sexta (tobacco hornworm): 115445224
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Entry
115445224 CDS
T07401
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03013
Nucleocytoplasmic transport
msex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115445224
09122 Translation
03013 Nucleocytoplasmic transport
115445224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msex03019
]
115445224
03041 Spliceosome [BR:
msex03041
]
115445224
Messenger RNA biogenesis [BR:
msex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
115445224
Spliceosome [BR:
msex03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
115445224
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
DENND11
RWD
Motif
Other DBs
NCBI-GeneID:
115445224
NCBI-ProteinID:
XP_030027293
LinkDB
All DBs
Position
14:complement(8884156..8887473)
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AA seq
691 aa
AA seq
DB search
MGKEEVSAKKRRKINTSSSSDVTKQNPTDVYKRVVEFEETEAQLRPADRDASLFKKLCQD
IRQLFADIAELKNKDNEEAKEKINAKRVEASLLLVALKKLNRLEKVRTRAGRDALHKEKQ
RVDSTHLLLQNLLYEADHLNKEVTKCLQFKSKDEEIELVPVEDFYINAPADVSRADITKK
DEHQLQLARLEWELRQRRELAAACNELVASKDRVAAAIAAARSRLDALAPHLKDVLKATK
PLQECLALRLDEKRDETRTASLLPPPLFLLYSNAYAYSDVLGSNVVTVSISGDEDDARRL
EQLHNIDNDLVASNDSDSDADNNDEEQNKKKRHHRTSKLSKQEKAEAKKKEVLRKHPLNV
LLSVKVPDGTALTLIFSYLLHLKIIVVKFTVAQPKPVTGVSAADVLNGHCILNELYPGDT
GNDSPHPATAFVLNSVGISETFQYFISEVGRPYIWAQRMCGLDFMSLVVGEQNINKVIEP
SRSLSITTVENFILTLKKRLKSRVELMRELQDLESGKITPAKGDMTCPVRLSGSLTQWQS
VGWPEYSQSPSTNFLISEGLVTPNDLLYRAIITRQSAKLVAMVALRSDYPKVAPIFSLTL
HWNGTHHSGINDDIRDIERIINTDWVSGGDNIHGCLSNQISKLLTCLDILLETSGSSEFP
PDKVMLNPVRGRNRVKPYKYLKQGAGVFVQY
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaggaagtatcagcaaaaaaacgccgcaaaatcaacacaagttcttcaagc
gatgttacaaaacaaaaccccacagatgtgtataagcgtgtggtggaatttgaagaaaca
gaagctcaactacgtcctgcggatagagatgccagtttattcaaaaaactttgtcaagat
attagacaacttttcgcggatatagcagaattgaaaaacaaagataatgaggaggcaaag
gaaaaaatcaatgcaaagagagttgaagcttcattactactggttgcacttaaaaaatta
aaccgcttggagaaagtacgcaccagagcaggccgtgatgcactacataaagagaaacag
agggtggactcaacacatctgttgctacagaacttactttatgaagctgatcatctcaac
aaagaagtgacaaaatgcctacagtttaaatcaaaagatgaagaaattgagcttgtgcca
gttgaagatttctatatcaatgccccagcagacgtgtcacgagcagatattacaaagaaa
gatgaacatcagttacaattggcaagactggagtgggaacttcgtcagcgtcgtgaacta
gcagcagcgtgtaatgagctggtagcatcaaaagatagagttgctgcagctattgcagca
gctcgttctagactagatgccttggctccacacctcaaagatgtccttaaagccactaaa
ccactgcaggaatgtttggctctgcgattggatgagaaaagagatgaaacaagaacagct
tcattgcttcctccaccactatttttgctctactcaaatgcttatgcatattctgatgtt
ttaggaagcaatgttgtcactgtcagtatatcaggcgacgaagacgatgcgcggaggcta
gaacagctgcataatatagacaatgatcttgttgcatctaatgactctgattctgatgca
gataataatgatgaagaacaaaacaagaagaaacgccaccacagaacatctaaattatcc
aaacaggaaaaagctgaagctaagaaaaaggaagtactaaggaaacatcctttaaatgtt
ctgttgtctgttaaagtcccagatggtactgctctcacactgattttctcatatttatta
catttgaagataattgttgtgaagtttacagtcgcacaaccaaaaccagtgacaggtgtt
tctgctgctgatgtgttgaatggacattgcattttgaatgaactatacccgggagacaca
ggaaatgattcccctcaccctgccactgcatttgtactgaattctgtcggaatatctgag
acatttcaatattttatttcggaagttgggagaccttatatttgggcccaaagaatgtgc
ggtttagattttatgagtttagtagttggtgaacaaaatatcaacaaagttatagagcca
tcaagaagccttagcataacaactgttgaaaactttattttgactttgaaaaagagactg
aaatctagagttgaacttatgcgggaattgcaggatctagaatctggaaaaattacccca
gccaaaggggatatgacgtgtcctgtaaggttgtccggttctttgacacaatggcaatca
gttggttggccagagtattctcaatctccttctaccaactttttaatctctgaaggtcta
gttactccaaatgatttgttatacagggctattattacgcggcagtctgctaaattggtt
gctatggttgctcttaggagcgattatcccaaagtagcaccaatattttctctgacactt
cattggaatggaacacatcattctggaattaatgacgatataagagacattgagagaata
ataaacactgattgggtctctgggggcgataatatacatgggtgcctttccaatcagata
tcaaagttgctaacttgtctggatattttactagaaacttcaggctcatcagagtttcca
ccggataaagttatgctaaatcctgtacgaggtcgaaatagagtgaaaccatataaatat
ttgaaacaaggtgctggtgtatttgtgcagtactaa
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integrated database retrieval system
