Manduca sexta (tobacco hornworm): 115445323
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Entry
115445323 CDS
T07401
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115445323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msex03019
]
115445323
Messenger RNA biogenesis [BR:
msex03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115445323
mRNA degradation factors
5'-3' decay
Decapping complex
115445323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
CPL
Motif
Other DBs
NCBI-GeneID:
115445323
NCBI-ProteinID:
XP_037297744
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All DBs
Position
23:14004731..14025969
Genome browser
AA seq
1152 aa
AA seq
DB search
MQPTTMLPKLSDTPQTISFSEGDGVCNAEVFSSYVTVTTNAGNHDHGSSKVKLKNLVDYN
WEPKFYSGQLLAMHMSGKYLAYSIKAVNAVNPGTCSGMVRVVYNVEPGTDRRALIKGMKG
EVQDLSFAHIQNQVVLACIDEQGNFYVHEIESTDSGLRCTLVAEVREDTGVVGAAHRVVW
CPYIPDEDDDAPDDDVARLLLTTHCNVGRMWNMRLIASAVAGSGGVGGARALAGGPGALA
ATDHSAALVDAAFSPDGTALATASADGYVMFFQVYMHNESSPRCLHKWQPHGGKPLSCLF
FLDNHKNYNSDVQFWKFAVTGAENNTTIKIWSCKSWNCVQTITFTPSVGAESSLGLKAML
DTSASYLLLSDFNTRSLYVLNMARDTDDSTAYCRSISEFLLPFPVLSLCIIEAEEQQVKC
DSSCDDPFHRNGSGGDVADSPDDFEMHHDEEGSGGSCSSDNGRRVCVRLYIVQPKGLQEG
RLVYTPPRTHRDLLHGLSDLALEDKSSEAAPTAITSSILQQQSQQLKNLLMRSQTQPGSL
IGTRPESPSMAPQLNLMTPDAFSDVFSSPGKRDEDDPPLSATPDVGGKPRTSIGDAGSVC
EAASAGVSAGQAKLTSGGSSPSREVQQILARDDPNAFFDQLEEESPPTPPAPSASSVVPN
GAEPLLVADLFPPPENPPHPHKLTHANSDTSWPQISIAQITEANQRKASSDKSSSQSLNN
SLGLAERACSEEVRAAAAPANARLDMLEQKLDKLTEMVAAQSRELRSLRGAVTSPRELID
EALHAHTQRTTQAIENALALGWERISRAGETASARAAAAAGAGAARALEPLAAALQHELA
AKLSATDQLLRDNIDKLVNSKTVMERLSTTIAKSLSEMVRESFRSALFESVLPAMEKAHA
QIFKQINQAFQNGTKEFAANTEAAARAAVERGGAAATEALRGALQRHADALQAARAHPTQ
LALLTTALRDATHTVLEKELAWWREQARTVVAQMSRAHSPASSHHPDRQEVGCVQMQVAQ
IQSLMAAGEVNGAFQQALSASDLTLVMCACRAAEPAQVFGPPCKLKQPVLLSLVQQLAAD
ITTDTHLKHRYLEEAVMNLDTTSPGTREHLPGVVRALQKQIISFLQTAPSHALARQFRML
LMATEALVKSTA
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccgacaacaatgcttccgaagctttcggatactccccaaactatatcattctca
gaaggggatggtgtgtgcaacgcagaggtgttctcatcctatgtcactgttaccaccaac
gctggcaaccatgaccatggtagttcaaaggtcaaactcaaaaacctggtggactacaat
tgggagcccaagttctactctggacaacttctcgccatgcacatgagtgggaaatacctg
gcatactctataaaagctgtgaatgcagtgaatcctgggacatgtagcggcatggtgcgc
gtcgtgtacaacgtcgaacccggcacggacaggcgggcgctcatcaaaggcatgaaggga
gaggtacaagatctatcgttcgcccacattcaaaaccaagtggtgctcgcgtgcatcgac
gaacagggaaacttctacgtgcacgagattgaatctactgacagcgggctcaggtgcacg
ctggtcgcggaggtgcgcgaggacacgggcgtggtgggcgcggcgcaccgcgtggtatgg
tgcccctacatccccgacgaggacgacgacgcgcccgacgacgacgtcgcgcgcctgctg
ctcaccacgcactgcaacgtcggtcgtatgtggaacatgcggttgatcgcgtctgccgtg
gcggggtctggcggggtgggcggcgcgcgagccctggccggaggtcccggagccctggcg
gccacggaccacagcgcggcgctggtggacgccgcgttctcccccgacggcaccgcgctc
gccaccgcctccgctgacggatacgtcatgttcttccaggtgtacatgcacaacgagagc
agcccgcgctgcctgcacaagtggcagccgcacggcgggaagccgctcagctgtctcttc
ttcctcgacaaccacaagaactacaacagcgacgtccagttctggaagttcgcggtgacc
ggcgcggagaacaacacgaccatcaagatctggtcgtgcaagtcctggaactgcgtgcag
accatcacgttcacgcccagcgttggggccgagtccagccttgggctgaaggcgatgctg
gacacgagcgcgagctacttgctcctgtcggacttcaacactcgcagcctgtacgtgctg
aacatggcgcgcgacacggacgactccaccgcctactgcaggagcatctccgagttcctg
ctgccgttccccgtgctcagtctgtgcatcatcgaggctgaggagcagcaagtgaagtgc
gactcgagttgcgacgacccgttccaccgcaacgggtccgggggcgacgtcgccgactct
ccagacgacttcgagatgcaccacgacgaggagggttcaggagggtcgtgcagttcggac
aacggtcggcgcgtgtgtgtgcgtctctacatcgtgcagcccaagggcctgcaggagggc
cggctcgtgtacacaccgccgcggacacacagggacctcttgcacggtctgtcagatctg
gccctagaagacaagtcttcggaagcggcgcccaccgccatcacgtcgagcatcttgcaa
cagcagagccagcaactcaaaaacctccttatgaggtctcagacccagcccggaagcttg
atcggcacgcggcctgagtcgccgtccatggcgccgcaactcaacctcatgacaccggat
gctttcagtgatgttttcagttcgcccggcaagcgcgacgaggacgacccgccgctctcc
gccacgcctgatgtcggcggcaagcctaggacatccataggggatgctggttcagtgtgc
gaggcggcgtctgcgggcgtctccgccgggcaggccaagctcacctcgggcggctccagc
cccagcagggaggtgcagcagatcctcgccagagacgaccctaacgcgttcttcgatcaa
ctggaggaggagtccccgccgacaccgcccgcgccctcggcgagctcggtggtgcccaac
ggcgcggaaccgctgctggtggcagacctgttcccgccgccagaaaacccgccgcatcca
cacaaactcacacatgccaacagcgacacgtcatggccgcagatctcgatagctcagatc
acggaggcgaaccagcgcaaggcgtcgagcgacaagtcgagcagccagtcgctcaacaac
tcgctggggctcgccgagcgcgcctgcagcgaggaggtgcgcgccgccgccgcgcccgcc
aacgcgcgcctcgacatgctcgagcagaaactagacaagctcaccgaaatggtggcggca
caaagtcgcgagctgcgcagcttgcgaggggctgtaactagtccacgcgagctaattgat
gaggcactgcatgcgcacacgcagagaactacacaggccatagagaacgcgttggcgctt
ggatgggagcgcatctcccgcgcgggcgagacggcgagcgcgcgcgcggcggcggcggcg
ggcgcgggcgcggcgcgcgcgctggagccgctcgccgccgcgctgcagcacgagctcgcc
gccaagctcagcgccaccgaccagctgctgcgcgacaacatcgacaaactcgtcaacagc
aagacggtgatggagcgactaagtacaacgatcgcaaaatccttgtcggagatggtgcgc
gagtcgttccgttcggcgttgttcgagagcgtgctgcccgccatggagaaggcgcatgcg
cagattttcaaacaaatcaaccaggcgttccagaacggcaccaaagagttcgcggcgaat
acggaggcggcggcgcgtgcagcagtggagcgtggcggcgctgcagctacagaagcgctg
cgcggtgcgctgcagcggcacgccgacgcgctgcaggcggcgcgtgcgcatcccacgcaa
ctcgcacttctcaccacggcgctcagagacgccacgcacactgtgcttgaaaaggagttg
gcttggtggagggagcaggcgcgcaccgtagtggcgcagatgtcgcgcgcacactcgccc
gcctcctcgcaccaccccgacagacaggaggtggggtgtgtgcagatgcaagtggcgcag
atccagtcgctgatggcggctggcgaggtcaacggcgccttccagcaggcgctgtccgcc
tccgatctcacgttggtgatgtgcgcctgccgagccgccgagccggcgcaggtgttcggc
ccgccgtgtaagctcaagcagcctgtgctgctgtcgctcgtgcaacagctcgcagctgat
attaccacggatacgcatcttaagcatcgataccttgaggaggcggtgatgaacctggac
acgacgtccccgggcacgcgcgagcacctcccgggcgtggtgcgcgcgctgcagaagcag
atcatctcgttcctgcagacggcgccgtcgcacgcgctggcgcgccagttccgcatgctg
ctcatggccaccgaggcgctggtcaagagcaccgcgtga
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