Manduca sexta (tobacco hornworm): 115445576
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Entry
115445576 CDS
T07401
Name
(RefSeq) LOW QUALITY PROTEIN: cleavage stimulation factor subunit 2
KO
K14407
cleavage stimulation factor subunit 2
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115445576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msex03019
]
115445576
Messenger RNA biogenesis [BR:
msex03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
115445576
U7-dependent histone pre-mRNA processing factors
115445576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_10
RRM_7
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
115445576
NCBI-ProteinID:
XP_037301382
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MDKSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKG
YGFCEYKDQETALSAMRNLNGYEIXGRSLRVDNACTEKSRMEMQALMQGPQVENPYGEAV
EPEKAPEAISKAVATLPPEQMFELMKQMKLCIQNNPTEARNMLLQNPQLAYALLQAQVIM
RIVDPATAVSMLHPSNPVPPVLQSGDKPQPNTYVPNNPPPCKFNHNPPPLLVNPVPPPSQ
YPPTRPSMDVDLRGSRAAVPPLLDQDMRSLPPVHPPHQTPHPVPPPQHHAAEPPFPRDPR
LANSQPFNADPRVRPNDPRTQPKPPPQPQLPPGMPSAAQARNIQGIPSGASDQEKAALIM
QVLQLSDEQIALLPPEQRASILMLKEQIAKSTQQR
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggataaaagcaaagaaaaagaagagcagagtatcatggataaatccatgagatctgtt
tttgtcggtaacataccttatgaagccacagaggagaagttaaaagatattttcagtgaa
gtgggtccagtattatcgttcaagcttgtatttgaccgtgagactggtaagccgaagggg
tatgggttctgcgaatacaaagaccaggagacagcgctaagtgctatgagaaatctcaat
ggctacgaaattngaggacgctcactccgtgtggacaacgcttgtactgaaaaatctaga
atggagatgcaagccttgatgcagggacctcaggtggagaatccatatggtgaagcggtg
gagcctgagaaggctccagaagctattagcaaggctgttgctactcttccgccagagcaa
atgttcgagctgatgaaacagatgaaactttgcatacagaataatcctaccgaagcaagg
aacatgttgcttcagaacccacaactggcttatgcattactccaagcccaagtgatcatg
aggattgtggacccagctacagctgttagtatgctgcatccaagcaatccggttccacca
gtgttgcagtctggagacaagccacaacccaatacttatgttccgaataatcctccacca
tgtaagtttaaccacaacccccctccattgcttgttaatcctgtaccaccgcccagccag
tatccaccaactcgtccgtcgatggacgttgacttgcgaggatcacgcgcggctgtgccc
ccgctgctcgaccaggacatgcgcagtctgccgcccgtgcaccctccgcaccagacgcca
caccctgtgccgccgccgcagcaccacgcggcagaaccgccgttcccgcgcgacccgcgt
ctggcgaactcccagccgttcaatgctgacccaagagtgcggcccaacgacccacgcacg
cagccgaaaccgccgccgcaaccgcaattgccgccgggcatgccgagcgcggcacaagcg
cgaaacattcaaggcataccatcaggtgcttcagatcaagaaaaggccgcgttgattatg
caagtgttgcagctatcagatgaacaaatagcattactgcctccagagcagcgcgctagc
attttgatgctgaaggaacaaatcgcaaagagtactcaacaacgttga
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