Manduca sexta (tobacco hornworm): 115446003
Help
Entry
115446003 CDS
T07401
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115446003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msex03021
]
115446003
03036 Chromosome and associated proteins [BR:
msex03036
]
115446003
Transcription machinery [BR:
msex03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
115446003
Coactivators
SAGA/TFTC/STAGA complex
115446003
Chromosome and associated proteins [BR:
msex03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
115446003
STAGA complex
115446003
TFTC complex
115446003
SAGA complex
115446003
SLIK complex
115446003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_WDR19_1st
VPS8_N
eIF2A
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
115446003
NCBI-ProteinID:
XP_030028399
LinkDB
All DBs
Position
23:8700352..8706363
Genome browser
AA seq
651 aa
AA seq
DB search
MTEKSTPLLAVLQLLRKYNLKGTEEILRKEASLGDVEYEGLDLPEVEIASILTAHHTESD
PYSYEFAYDNLKKFVENSLDVYKYELSMLLYPIFVHMYLVLILYDHTEHAANFLEKFGPE
QEDYYQEDLKRLSFVTSKEQIKGNELAEIYSSNKFVVQLSRDASSQLKRYLHEQKSSTVI
INIINNHIQIEVHDGPGRTQSQVRATAGGILGEATRNENRTKVYYGLLKEPDIQVLPAPV
EDEEEVEETPDKPKKKKAKKDNIFMKKPKSDPNAPPNDRIPLPELKEADKFEKGKALREA
SKRVPLGPESLPSICFYTLLNSSNNAICTDICDDSTLLAVGLGNSTIKVWTLTTVKLRGM
KSVDKLQDIDREAGDVLVRMMEEKDRDTCRTLFGHSGPVYKVAFDPFKTLLLSCSEDATV
RLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASAGHDRTARLWATDHHQPLRIFAGHL
SDVDCVQFHPNSNYIATGSSDRTIRVWDCLTGSQLRIMTGHKSAIFTLAFSVCGRWLASG
GSGGEVMVWDISNGMPATLLPPSHTAPIHALAFSRDGTILASGSLDYNIKLWDFTAITEE
ATLEEAGIVNSTQKEDKFLLRSFPTKNSPIKGLHFTRRNLLLAVGTYEGNP
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgactgagaagtctacacccctcctggctgttttacagctgcttcgaaagtataatttg
aagggtactgaggaaatattgaggaaagaagcaagtctaggagatgtggaatatgaaggt
ttagatctacctgaagttgaaatagcaagcatactcactgctcaccatactgagagtgac
ccttacagttatgaatttgcatatgataacttgaaaaaatttgttgagaattcattggat
gtatacaagtatgaattatcaatgctcctttatccaatatttgtccacatgtatttagtg
ttaattttgtatgaccacacggaacatgctgctaattttttggaaaagtttggccctgag
caggaagattactatcaagaggatctaaagagactttcctttgtcaccagtaaggaacaa
ataaaaggcaatgaattggctgaaatatacagttccaataaatttgtggtgcaactgtct
agagatgcatcttcacagcttaagcgttatttacacgagcaaaagagttccacagtgatc
ataaatattattaataaccatattcaaattgaggttcatgatggtccaggtaggacacaa
agtcaggtccgggccacagctggtggtatcctcggtgaagcaactagaaacgaaaaccgc
acaaaagtttattatggcctactgaaagaacctgatattcaagtactgcctgcaccagta
gaagacgaagaggaggtcgaagaaacacctgacaaacctaaaaagaaaaaagcaaaaaaa
gataatatctttatgaaaaagcctaaatctgaccctaacgctcctccgaatgatagaatt
cctttacctgaattaaaagaggctgataaatttgaaaaagggaaagctctaagagaagct
tcaaagcgtgtgccactaggacccgaaagcctgccatctatttgtttttacacattgcta
aatagtagcaataatgcaatatgtactgatatttgtgatgactccactttattggcagtt
ggtctcggtaactctactataaaggtttggactttgacaacagtaaaattacgtggaatg
aaatctgtggataaattgcaagacattgacagagaagcaggtgatgtccttgtcagaatg
atggaagaaaaagaccgagatacttgccgtactctttttggtcattctggtcctgtgtac
aaggtcgcatttgatccgttcaaaacgttgcttttgtcatgctccgaagatgccacagta
aggctatggtctctgcagtgctggacgtgcctggtggtgtaccgcgggcacgtatggccg
gtgtgggacgtgcgctggtccccgcacgggcactacttcgcgtccgcgggacacgaccgg
acagctcgattgtgggctacagaccaccaccaaccactcagaatctttgctggacacctc
tcggatgttgactgcgtacaatttcatccaaattctaattatatcgcaacaggatccagt
gatagaacaataagagtatgggattgtttgacgggaagtcaactacgcataatgacggga
cacaagtccgcaatttttactctcgcattttccgtctgcggaagatggcttgcgtcaggc
ggaagcggtggtgaagtaatggtgtgggatatctctaatgggatgccggccacccttctt
cccccgtcgcatacggcaccaattcatgctctggcatttagtcgggacggcacaatttta
gcttctggttctttggactacaatataaaattatgggacttcaccgctataactgaagaa
gctactcttgaagaagccggtatagtaaatagtacacaaaaagaagataaatttttgttg
cgatcgtttcctacaaaaaattcacccataaaaggattgcactttacaaggcgtaattta
ttacttgccgtggggacatatgaaggaaatccataa
DBGET
integrated database retrieval system
