Manduca sexta (tobacco hornworm): 115446006 Help Entry 115446006         CDS       T07401                                  Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism msex  Manduca sexta (tobacco hornworm) Pathway msex04512   ECM-receptor interaction msex04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:msex00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     115446006  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     115446006  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:msex04147]     115446006    00536 Glycosaminoglycan binding proteins [BR:msex00536]     115446006 Exosome [BR:msex04147]  Exosomal proteins   Exosomal proteins of other cancer cells    115446006 Glycosaminoglycan binding proteins [BR:msex00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    115446006 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  115446006 NCBI-ProteinID:  XP_030028402 LinkDB All DBs Position 23:8754987..8805899 Genome browser AA seq 1815 aa AA seqDB search MSGPARARLHALYLVPVALLLLLWNPIPVTAVICNQTICDCTGLKGDRGDYGPPGIPGPQ GDYGDDGPEGRMGVPGEFGDFGDRGDYGDKGERGVDGPYGLRGSPGPQGPVGLGGIIGLP GLDGCSGIDGNPGPPGMLGPPGDRGLPGPQGDKGFQGLAGEGGVNSRGAKGMQGEPGRPG MIGERGPPGWRGDSGLPGEDGDQGPSGLKGELGYRGEPGEDVIGPPGEKGDQGEVGDPGR STIYGIDRVSQNITIIAKGNMGDKGYRGQQGVKGIKGTIGSQGAPGVYGANGPQGFKGDQ GNEGPRGKPGHRGKDGPPGPRGDKGAPGYAGLDGDNGLVGLRGEDGRDGNPGPQGPPGEP GPFDETLNEPLLPGPVGEQGPEGFPGPIGEPGLNGEPGMPGIMGKHGLPGHKGFPGRQGN PGISPKGEQGSDGFKGLPGFRGLSGYPGEVGPMGPKGFKGATVRGPPGEEGFFGMDGIPG MRGDRGEQGTTGPPGFPGRGVHGVGPPGPPGTPGRPGRPGDTGFAGMPGLPGSKGIQGDD CPYCPSGNPGPKGQRGDDGFPGQKGYIGYEGLPGPRGSKGISGSPGIPGPKGPKGNKGSP GMGGPQGAKGAKGHLIEPPKSLTIADVGPPGDSGFMGDIGLPGDPGYPGSAGNFGLKGKE GMRGDDGSQGFPGRNGTRGRDGQPGWPGAPADFYNMPFVLQGQKGEPGLKGELGEPGING SPGEVGESSENLYSKGAKGFPGIPGIKGIRGRKGERGELGVDGYEGQPGDQGFRGKSVAG PIGFKGYPGQRGDTGPFGEPGDDGQQGPVGFPGRKGYKGSRGDIASTALPGEKGEPGLAG MKGYTGEPGYPGSSGRPGALGMKGLPGPPGEIGPDGPMGPRGRKGFPGVFVQGAPGLPGR PGLPGLMGQIGDQGLQGPNGLQGDTGVKGMKGEAGRMGYRGLDGEKGAPGLKGFPGRMGR PGLNGVSGDRGETGAPGYNGEPGSMGPKGSEGIKGPRGDIGLPGTPGEEGKIGRKGDMGD IGFTGLKGIRGENALNGMKGDKGERGYEGIEGTPGLNGIKGDKGEEGDIGLSIEGKPGSK GDKGNSGFPGRPGMPGLQGQIGDIGYPGIIGQSGDKGFQGVPGYPGRRGNDGPKGQKGIP GITGKKGFIGDRGEAGIPGIMGFSGLPGDQGLPGREGPRGLLGDKGDVGDIGITNYLPAT KGDRGERGMEGFRGETGDYGDSGSMGPKGFKGPQGDIGSPGIFGATGFPGPKGMRGNPGP PGIPGEPGPIEQGAPGTPGIDGLPGWIGPMGQKGAPGEYGTDGPKGLQGPPGLSFQGAKG DNGQDGYPGIPGEQGMRGFQGMQGETGPQGFMGDDGEPGMSISPKGARGEQGWQGNMGLK GAQGDAGDFGDNGLPGLVGLKGEDGDMGQEGETGYKGPQGFKGLKGDKGEGPRPYEIIRG PPGEEGQPGFEGQPGPNGLPGPMGLIGITGEKGETGDIGFPGPIGAVGLQGLQGIRGVRG QKGYEGLKGAKGFPGMPAPPPPVPKSRGFYFTVHSQTRMIPQCPAGTSPLWEGFSLIHIV GNSQGHGQDLGAPGSCLRKFTTMPYLFCNFNDICEFAQREDYSFWLSTPEPMPMTMTPIL ARDVGNYISRCMVCEAPTRTIAIHSQSSVVPTCPNGWEELWIGYSFVMHTAGVDVSGQSL ISPGSCLREFRTSPFIECNGLGRCNYFATAISYWLSTIDDNRMFQTPVQQTLKADQVSKV SRCAVCMRRWVGQRSSSTYPGGNVNSVPKAVQRRPTVYRRPNYHSGYPGYPRRYRVVRGR RTRPPVTKSSPVSYV NT seq 5448 nt NT seq  +upstreamnt  +downstreamnt atgtcgggcccggcgcgtgcgcgcctccacgcgctttatcttgtgcccgtcgcgcttctt ctactcttatggaatcctattccagttacagcagttatatgcaatcagacaatatgcgac tgtaccggactgaaaggtgaccggggagattatggaccgcccggtatacctggtccacaa ggcgactacggtgatgatggacctgaaggccgaatgggtgtacccggagaatttggagat ttcggtgatcgcggagattatggtgacaagggagaacggggagttgatggtccatacgga ttaagaggttccccaggaccgcagggaccagtaggattaggaggaattataggtttacca ggtctagacggctgcagtggtattgatggaaatccaggacctccaggaatgcttggtcca cctggtgaccgaggtttacccggaccacagggcgacaagggtttccaaggtttagcaggt gaaggtggtgttaactcaagaggtgccaaaggcatgcaaggagaaccaggcaggccggga atgataggagagcgggggcctccaggctggaggggagatagtggtttacctggtgaagat ggtgatcagggaccttcaggcttaaaaggcgaattggggtacagaggtgaacctggcgag gatgttataggcccgccaggtgaaaaaggcgatcaaggcgaagtaggtgatccaggacgc tccactatatatggaattgatcgagtatcacaaaatataactataattgccaaaggaaat atgggagacaaggggtatagagggcaacaaggagttaaaggaattaaaggaacaatcggc tcacagggtgctccgggagtatatggtgcaaatgggcctcaaggttttaaaggagatcaa ggcaatgaaggtccgcgtggaaaacctggccataggggtaaagatggccccccgggacct cggggcgataaaggcgctccaggatacgcaggattagacggggataatggactagttgga ttaagaggtgaagatggtagagatggaaatcctggacctcaaggaccacccggtgaacca ggaccatttgacgaaactcttaatgagcctttacttcctgggccagtcggagagcaaggt cctgaaggatttccaggaccaattggagaacctggtttgaatggcgaacctggtatgccg ggtataatggggaaacatgggttaccaggtcacaaaggtttccctgggagacaagggaac cctggtatttccccaaaaggggaacaaggaagtgatggttttaaaggtttacctggtttt cgtggactctcgggctatccgggtgaagtaggaccgatgggaccaaaaggattcaaaggt gctactgtgagagggccaccaggtgaagaaggattttttggcatggatggcatacctggc atgcgaggagatcgtggtgaacaaggtaccacggggccgcctggttttcctggccgtggt gttcatggagtagggccacctggtcctcctggtaccccagggcgccccggtagacccggt gatacgggctttgcaggaatgccaggtcttccaggttcaaaaggaattcaaggagatgat tgtccgtattgcccatcaggaaaccctggccctaaaggacaaagaggtgatgatggtttc ccgggtcaaaaaggttacataggttatgaaggcttgccaggtccacggggttcgaaagga atctctggatctcctggtatacctgggcctaagggaccgaagggtaacaagggaagtccc ggtatgggcggacctcaaggcgctaaaggggcgaaaggacacctaatcgagcccccaaaa tccctaacaatagcagatgttggtccaccaggagactcaggattcatgggtgatatcgga ttgccgggagatccgggatatccaggcagtgctggcaattttggcctgaagggtaaagag ggcatgcggggagacgacggttcccaaggatttcctggtagaaacgggactagagggcgc gacgggcagcctggttggccaggagctccagctgatttctataatatgccttttgtactt caaggccaaaagggtgaaccaggtttaaaaggcgaattaggagaacctggtataaatggt tctccaggagaagttggcgagtcttctgaaaatttatattcaaaaggtgcaaaaggattt cctggaatcccaggaatcaaaggtatacgagggaggaagggagaacggggggaactcgga gtagatggttatgagggtcaaccaggtgatcaaggatttagaggaaaatcagtagctggt cctataggcttcaagggatatcctggtcaaagaggtgacacgggtcctttcggtgaacca ggagacgacggacaacagggacccgtaggatttccagggagaaaaggatacaaaggctct cgtggagacatagcttctaccgctttacctggcgagaagggtgaacctggactagccggg atgaaaggatatactggtgaaccaggctaccctggctcttctggacggcctggcgcttta ggaatgaaaggactgccaggtcctccgggagaaataggacctgatggaccaatgggacca aggggtagaaaagggttcccaggtgtctttgtacaaggcgcaccaggtctaccgggtcga ccgggactgcctgggttaatggggcagataggtgatcaaggtttacaaggacctaatggc ttacaaggtgatacaggtgtcaaaggaatgaagggagaggcaggtcgaatgggatatcgt ggtttggatggagaaaagggagctccaggtttgaaaggtttccctggacgtatgggtagg cctggactaaacggagtgtctggggatcgtggagaaactggtgctcctggatataatgga gaaccgggaagtatgggtccaaagggatctgaaggtataaaaggcccgaggggtgatata ggccttcctggaactcctggcgaagaaggtaaaattggaaggaaaggtgacatgggtgat atcggattcacggggcttaaaggaattagaggtgaaaatgcactcaatggaatgaagggt gataaaggtgaacgtggatatgagggcatagaaggaacaccaggattaaacggcataaaa ggtgacaaaggagaagagggagacataggcttaagcatagaaggcaagccggggagcaaa ggtgataaaggcaattcaggtttcccaggaagaccgggcatgcctggacttcaaggacaa attggcgatattggttaccctggaattatcggtcaatccggtgataaaggattccaaggg gtacctggctatcccggaagacggggtaatgatggacccaagggacaaaaaggtattcct ggcatcacgggcaaaaaaggttttataggtgatcgcggtgaagcaggtatcccaggaata atgggcttttctggtcttcctggagaccaaggattacctggacgggagggacctcgagga ctgttaggagataaaggagacgtaggagatattggtattactaattacttaccggcaact aaaggcgataggggcgagagaggaatggaaggtttcagaggcgaaaccggagactacggg gactccggttctatgggacccaaaggtttcaaaggaccacaaggagacataggcagtcca ggaattttcggagcaacaggcttccctggtcccaaaggtatgagaggcaaccctggacct cctggtatcccaggcgaaccgggtccaattgaacaaggtgcgccgggtacacctggaata gatggtctccctggatggataggacctatgggccagaaaggagcacctggtgaatatgga accgatggacctaaaggtctacaaggcccaccgggtcttagtttccagggagctaagggc gacaatgggcaagatggttacccaggaattcctggagaacaaggtatgcgtggattccaa ggtatgcagggcgaaactggaccacaaggctttatgggagatgatggggaaccaggtatg tcaatcagccctaaaggagccagaggagaacaaggttggcagggcaatatgggtttaaaa ggtgcccaaggagacgctggagattttggcgataatggtttaccaggtttagtaggatta aaaggcgaggacggtgacatgggtcaagaaggagaaacaggctacaagggaccacagggt tttaaaggacttaaaggtgataaaggagaaggccctagaccctatgaaattatacgcggt ccaccaggcgaagaaggacaaccaggttttgagggacaacctggaccaaacggattgccg ggccccatgggtcttataggtataacgggcgaaaaaggtgaaacgggcgatatcggtttt ccagggccaataggagcagtaggtctgcagggattacaaggaataagaggtgttagggga caaaaaggttatgaaggcttaaagggagcaaaaggttttcctggaatgccagctccgcct ccccctgttcctaaatcacgaggattttatttcacagttcattcacaaacaagaatgata ccccaatgtcctgcgggaacatcaccactttgggaaggattttcattaatacacatcgta ggaaactctcaaggccatggacaggacttaggtgcaccgggcagttgtttacgtaagttt acaacaatgccatacttattctgtaatttcaacgatatttgcgaatttgctcaacgtgag gattatagcttttggctttcaacaccggaaccaatgcctatgactatgacgccaatacta gccagagatgtgggcaactatatatcaagatgtatggtttgtgaagcacctacgcgcacg attgcaatccatagtcaaagcagtgtagtccctacttgtccaaatggatgggaagagtta tggataggttacagctttgtaatgcacaccgcaggtgtggacgtttctggacagagtctc atatcacccgggtcgtgtttgcgggagttccgtacgagtccgtttatcgaatgcaatgga cttggccgttgtaattacttcgccactgccatttcgtattggttatcgactattgatgat aatagaatgttccagacacctgtacagcaaactcttaaggctgaccaagtatccaaagtc agcaggtgcgcagtttgtatgaggaggtgggtgggtcaacggtccagctctacgtacccg ggaggcaacgttaactccgtgcctaaggcagtgcagcgcaggccgacggtgtaccgtaga ccaaactaccatagtggataccctggatatcctcgtcgctatcgagtagtgcgcggaagg cgcacacgaccaccagtaacgaaatcgtcaccagtgtcatatgtgtga

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