Manduca sexta (tobacco hornworm): 115446176
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Entry
115446176 CDS
T07401
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
msex
Manduca sexta (tobacco hornworm)
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msex03021
]
115446176
Transcription machinery [BR:
msex03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
115446176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_14
TPR_8
TPR_12
TPR_CcmH_CycH
TPR_16
TPR_17
TPR_11
TPR_10
TPR_6
ARM_TT21_5th
TPR_7
TPR_9
TPR_Slam
Coatomer_E
ARM_TT21_4th
ANAPC3
Fis1_TPR_C
DUF6584
Motif
Other DBs
NCBI-GeneID:
115446176
NCBI-ProteinID:
XP_037296237
LinkDB
All DBs
Position
19:3358587..3373716
Genome browser
AA seq
1193 aa
AA seq
DB search
MSLEIPLMSTDEVIELDPEQLPSGDEVLSILQQERSQLNVWINVALAYYKQKKIDDFLKI
LESSRADANIDYRDFERDQMRALDMLAAYYVQEANKEKSKDKKKELFTKATLLYTMADKI
IMYDQNHLLGRAYFCLLEGDKMEQADAQFNFVLNQSPNNVPSLLGKACIAFNRKDYRGAL
AFYKKALRTNPDSPAALRLGMGHCFMKLNNQEKARMAFERALQLDPQCVGALVGLSILKL
NLQESESNKMAVIMLSKAYAIDPKNPMVLNHLANHFFFKKDYAKVQRLALHAFHNTENEA
MRAESCHHLARAFHAQGDCDQAFQYYYQATQFAPPNFVLPHYGLGQMYIYRGDAENAAQC
FEKVLKAQPGNYETMKILGSLYANSPSQSKRDIARQHLKKVTEQFPDDVEAWIELAQILE
QNDLQGSLNAYSTAMKILKEKVNADIPAEILNNVAALHYRLGNLTEAMKYLEEALEREKA
DAETLDSQYYNSIAVTTMYNLARLNEALCVYNKAEKLYKDILKEHPNYIDCYLRLGCMAR
DKGQIYEASDWFKEALKVNTEHPDTWSLLGNLHLAQQEWRPGQKKFERILQNSSTANDAY
SLIALGNVWLQTLHQPCREKDREKRHQERALTMYKQVLKTDPKNIWAANGIGCVLAHKGC
INEARDIFAQVREATADFPDVWMNIAHIYVEQKQYINAIQMYENCIRKFRMQYDVEWLTW
VARAHTLAGRAGAARGALLRARHVAPHDPALLHNTAVTLRRRAAHVLKDERGELRHVLRA
VHELHVSHRYFQRLANPEAEGTDSAASAEARACADLLSQAQWHVARARRQHDEEVTLRDK
QREQREAFRKQQEEERRRREEEQQKSTVEMLQKRQEYKEKTKNALLFTEMPSEGKPKGRG
RRRDEYVSDSPGSGSDRPADERREPKQKKRKKEGGEGRKGKSRKRREQRGSGSDSDPPRK
RGRKKARAKAAEEKLSAKQRAKIVSKETISTSESESDNNSRKSRSRSRSGSRSGSGSRSR
SPPANKGRKRIMSASDSDRSRSRSKSHSKSRSRSRSGSAKSRSRSKSRSRSKSRSRSKSR
SRSKSKSRSKSRSRSKSRSKSKSRSRSKSGSRSPARSKGKSRSKSKSVSRSRSKSVSRSR
SRSKSRSRSRSGSRASRSRSRSRSGSRSRSGSRNSRPETPVSRKSVSASEDEA
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcgaaattcctttgatgagcacggatgaggtgattgagctggatccagagcaa
ttgccgtctggagatgaggtgctcagtattttgcaacaagagcgctcacagctcaatgtg
tggatcaatgttgctcttgcatattacaaacaaaagaagattgatgatttcctcaaaata
ttggaatcgtcccgagcggatgccaacattgactatcgggattttgaaagggaccagatg
cgcgccttggacatgttggctgcgtattatgtccaagaggcaaacaaggagaagtccaag
gacaaaaagaaagagttgtttactaaggcaacccttttgtacaccatggcggacaaaatt
attatgtacgaccaaaaccatctcctcggccgagcatacttttgcctcctggagggggat
aaaatggaacaggcagatgcacagttcaactttgtgctcaatcagtcgccaaataatgtc
ccctcgttgctcggtaaagcgtgtatcgccttcaatcgcaaggattatagaggtgcgttg
gctttctataagaaagcattgagaaccaatccggacagtcctgctgcattacggcttgga
atgggacactgttttatgaaattgaataaccaagagaaggcgagaatggcatttgaaaga
gctcttcagttggatcctcaatgtgtaggagctcttgtcgggctgtcaatattaaagttg
aacctgcaagagagtgagtctaacaaaatggctgttataatgctgtcaaaagcttatgcc
attgatccaaaaaacccgatggtattgaaccatttggctaatcatttcttcttcaagaag
gactacgcaaaagtgcaacgcctggctctccacgcgttccacaacactgagaacgaagcg
atgcgtgcggagagttgtcaccacttggcgcgcgccttccacgcgcagggagactgcgat
caggccttccagtactactaccaggccacgcagttcgcgccgccgaacttcgtacttcca
cattacgggctcgggcagatgtatatctatcgtggtgatgctgaaaatgcagcacagtgt
tttgaaaaagtcctcaaagctcagccaggtaactacgaaacgatgaaaatcctgggatcc
ctgtacgctaactcgccatctcagtccaaaagggatatcgcacggcaacacttgaagaaa
gtcacagaacaattccctgatgatgtcgaagcttggatagagttggctcaaatattagag
caaaatgatttgcagggttcactaaacgcatatagcactgcaatgaagatattaaaagaa
aaagtgaatgcagatattcctgcggaaatattaaataatgtggcagccctacattacaga
cttggcaacttgaccgaggctatgaagtatcttgaagaagctcttgaaagagagaaggcg
gatgcagaaacacttgattcgcagtattacaactcgattgcggtgaccacaatgtataac
ttggcaagattgaatgaagcactctgcgtctacaacaaggcagagaaactttacaaggac
attttgaaagagcatcccaattacattgattgttatttgagacttgggtgcatggcaagg
gacaaaggtcagatttacgaggcctcggattggttcaaagaagctctgaaggttaacacg
gaacaccccgacacttggtcgttgctaggcaacctacatttagcacagcaagaatggagg
ccgggacagaagaaattcgaaaggatattacaaaattcatccactgccaacgacgcgtac
tccttgatagctcttggaaatgtatggctgcaaaccctacatcaaccgtgtcgcgaaaaa
gatcgtgaaaagaggcaccaagaacgagcgcttacgatgtacaagcaagttcttaaaact
gacccaaaaaacatctgggcagcgaatggaatcggatgtgttttggcgcataagggctgc
attaatgaagcgcgtgacatattcgctcaagtacgcgaggccacggcggacttccccgac
gtgtggatgaacatagcacacatctacgtcgagcagaaacaatacattaacgccatccaa
atgtacgaaaattgcatccgcaagttccgcatgcagtatgacgtggagtggctgacatgg
gtggcgcgtgcgcacacgctcgcggggcgcgccggcgccgcgcgcggggcgctcctgcgg
gcgcgacacgtggcgccacacgaccccgcgctcctccacaacaccgctgtcacgctgagg
cgccgcgccgcgcacgtgctcaaggacgagcgcggcgagctgcgccacgtgctgcgcgcc
gtgcacgagctgcacgtcagccacagatacttccaacgcctggcgaatccagaagcagag
ggcacggatagcgcggcgagtgcggaggcgcgcgcctgcgcggacctgctgagccaggcg
cagtggcacgtggcccgcgcccggcgccagcacgacgaggaggtcacgctcagggacaag
cagcgcgagcaacgcgaggccttccgcaagcaacaggaagaagagcgtcgtcgtcgcgaa
gaagaacagcagaagagcacagtggagatgttgcagaagcgtcaagaatataaagagaag
acgaagaacgcgttactgtttacggagatgccgtcggagggcaagccgaagggccgcggc
cggcgacgcgacgagtacgtctccgactcgcccggcagcggcagcgaccgcccggcggac
gaacgtcgcgaacctaagcagaagaaacgcaagaaggagggcggagagggtcgcaagggt
aaatcccgcaaacggagggagcagagaggctccggcagcgatagcgacccgcccaggaaa
cgcggcaggaagaaggcaagagccaaggcggcggaagagaagctcagcgccaaacagcgt
gcgaagatcgtgtccaaggagaccatctccacttcggaatcggaatcggacaacaactcc
aggaagtcgcgcagtcgcagccgcagtggcagtaggagtggtagtggcagcaggagtcgc
agcccaccagcgaataaaggaaggaagaggatcatgtcggcttccgatagtgacagatcc
cgctccaggtcgaagagtcattcgaagtcgcgcagtcggtcgcgttctggctcggcgaag
agccgatcgcggtctaaaagccggtcccgatcgaaaagcaggtcccggtccaagagcagg
tcccggtccaagagcaagtcacggtccaagagccgttctaggtcgaaaagccgttcgaaa
tccaaaagtcggtcccgatcgaagtctggttcaaggtcaccagctagatctaaaggcaaa
tcccggtcaaagtccaaaagcgtatcaagatcgcggtctaaaagcgtatcacgatcgcga
tcgagatctaagagccgatcccgcagccgttccggttcaagagcgtcccgttcccggtcg
cgatcccgttccggttcccggtcccgttccggatcgaggaattcccggccagaaacaccc
gtgtctagaaagtctgtatcggctagcgaggatgaagcatag
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integrated database retrieval system
