Manduca sexta (tobacco hornworm): 115446187
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Entry
115446187 CDS
T07401
Name
(RefSeq) LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
msex
Manduca sexta (tobacco hornworm)
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msex03036
]
115446187
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
msex00535
]
115446187
Chromosome and associated proteins [BR:
msex03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
115446187
Meiosis-specific proteins
Cohesin complex and associated proteins
115446187
Proteoglycans [BR:
msex00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
115446187
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
HAUS1
AAA_29
FtsK_SpoIIIE
DUF1702
CCDC-167
Motif
Other DBs
NCBI-GeneID:
115446187
NCBI-ProteinID:
XP_030028613
LinkDB
All DBs
Position
19:complement(3479158..3508201)
Genome browser
AA seq
1203 aa
AA seq
DB search
MHIKQVIIQGFKSYREQIVVEPFDKRHNVVVGRNGSGKSNFFHAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRIPIEKDEIFLRRVIGSKKDQFFLNKKVVPRSE
VLNLLESAGLSNSNPYYIVKQGKINQMAVAPDSQRLKLLREVAGTRVYDERREESVTILK
ETVGKVEKINEFLQTIEERLKTLEEEKEELKEYQKWDRARRVLEFIIHDTEHKENKRKLE
ELEKLRSNSGKEQQHYADLVREAQDHVREANRKLKEARKDVAAAREEKDILSTEQQQLLR
EKTKLELAIKDLTDDVDGDNKSKERAEAELERLRQQISEKERELEELKPKYEEMKAREEE
CTRALALNQQKRQELYAKQGRGTQFTSKQDRDRWIEKELKSLNKQIKDKKDHENKLREDL
RRDATKLTELEKRIEETTKEMERQRVAIDEHNKQYYECKKRKDQEQSARNELWRKETTLT
QNLSSLKEDLAKADQALRSMAGKPILNGRDSVRKVLETFQERGGEWAKIATQYYGPVIEN
FTCDKTIYTAVEVTAGNRLFHHIVESDTVGTKILKEMNRQSLPGEVTFMPLNRLQVRDMV
YPNDNNAIAMVQKLKYDPKYAKAMKYIFGKTLICRNLECATELGKQFHLDCVTLEGDQVS
SKGSLTGGYFNQSRSRLEMQKTRSELMEQITTLDQELNTLRQELNKTETSINTIVSEMQR
TETKQGKAKDIFDKVKADIRLMKEELGSIERFRGPKERSLAQCRSSLEAMQATKEGLESE
LHQELMEQLSTADQGKVDELNDAIRRLTQENKEAFSARMNLEATKNKLENLLTNNLIRRK
DELVQALQEISVEDRKRRLANSKADLSATEKRIKQINKELEEVERKVQAAVKNEKALKLE
LDKWRNKEKEAQDKMEEDAKGLEKMASKEVLLQEKIQESLDKIAALGTLPNAPELHAKYQ
KMSLKQLFKELEKANQHLKKYNHVNKKALDQFISFSEQKEKLYKRKEELDIGGEKIRELI
ETLEHRKLEAIQFTFKQVSKNFTEVFKKLVPHGRGSLIMRVGPDDGSEINPERANADQFT
GVGIKVSFTGGEGDMREMNQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDAQHR
KAIANMIHELSTSAQFITTTFRPELLEHAHKFYGVKFRNKVSHVECVSQEEARDFVEDSA
THA
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgcatataaaacaggtaattatacaaggatttaagagttacagagagcagatagtcgtg
gaaccatttgataaaaggcataatgttgtggtcggacgcaacgggtccggtaaaagtaac
tttttccacgctatacaattcgtgctaagtgatgagttctcacacttgaggccagaacag
cgcctggccttgcttcatgaagggacgggccctagggtcatatctgcattcgtggagatt
atttttgacaattctgacaataggattcctattgaaaaagatgagatattcttgcgacgt
gtcattggatccaagaaggaccagttcttcctcaataagaaagtggtgcctcggtctgaa
gtgctgaatttgcttgagagtgctggattgtcaaattccaatccatattacattgtcaaa
caaggaaagatcaatcaaatggcggtagcgccagactcgcagagattgaagctgctcaga
gaggtagctggcacgcgcgtctacgatgagagaagggaggagtcagttaccatactgaaa
gaaactgtcggaaaggttgaaaaaatcaacgagttcctgcaaacaatagaagagcgtctg
aagaccttggaagaagaaaaggaggaactgaaggaataccagaaatgggaccgcgcgcga
cgcgtcctggagttcatcatacacgacaccgaacacaaggagaacaaacggaaactagag
gagttggaaaaacttcgctcgaacagtggtaaagagcaacaacattatgctgacttggtg
agagaggcccaggaccatgtcagagaagcaaacaggaagttaaaagaagcacgtaaggac
gtggcggcggctcgagaagaaaaggacattctgtcgacggaacaacagcagttgcttcgc
gagaagaccaaattggaactcgccatcaaagacttaacagatgatgtcgacggcgacaat
aaatctaaggaaagagcagaagccgagctggagcggcttcgtcaacaaatatcggaaaag
gagcgagagttggaagaactgaagcccaaatatgaggagatgaaagctcgcgaggaggag
tgcacgcgagctttggcgttgaaccagcagaaacggcaggagttgtacgcgaagcagggc
agaggcacccagtttacaagcaaacaggacagagaccgctggattgagaaggagttgaag
tccctaaacaaacaaataaaagacaaaaaggaccatgagaacaaactgcgcgaggatctc
cgacgcgacgcgaccaaactcaccgagttggagaagagaatagaggagactacgaaagag
atggagaggcagagagtcgccatcgacgagcataacaaacagtattacgagtgtaagaaa
aggaaggatcaggagcagagtgctagaaatgaactatggcgtaaagaaacaacgttgaca
caaaatctgtcatcactgaaggaagacttggcgaaagcggaccaagcactacgctcaatg
gcgggaaagcccatactgaacgggcgcgacagtgtgcgcaaagtactagagacattccaa
gaacggggtggcgagtgggccaagatcgccacgcagtactacggaccagttatagagaac
tttacgtgtgacaagaccatatacaccgctgttgaggtgacggcaggtaacaggctcttc
catcacatagtggagtcagacacggtcggcaccaagatcctgaaggagatgaacaggcag
agcctgcccggagaggtgacgttcatgccgctcaacaggctgcaagtgcgcgacatggtc
tatcccaatgataataacgcaatagctatggtgcagaaattaaaatacgatccgaaatat
gccaaagctatgaagtacatattcgggaagacgctcatctgcaggaacctggagtgtgcc
accgaactcgggaaacagttccacctcgactgtgtcactcttgaaggagatcaggtgtca
tcaaaaggctcgctaacaggaggttacttcaaccaatctcgctctcgtctcgagatgcaa
aagacccgctccgagctgatggaacaaatcacaacactggaccaagagctgaacacgctg
agacaagagttgaacaaaactgagaccagtatcaacaccatagtgtctgaaatgcaacgg
actgagaccaaacaggggaaggctaaggacatattcgacaaggtgaaggcggatatccgg
ctgatgaaagaggagttgggttcgatagaacggttccgcgggcccaaggagaggtccctg
gcgcagtgccgctccagtctggaagccatgcaggccaccaaggagggactcgagtctgaa
ctgcatcaggaacttatggagcagctgtcgacggcggaccaaggtaaagtggacgagttg
aatgacgcaatccgccgcctcacgcaggagaacaaggaagccttcagcgccaggatgaac
ctcgaggccaccaagaacaaactcgaaaacttattaactaataacttgataagacgtaaa
gatgagctagtacaggcactacaagagatctcagtggaggacaggaagagacgcctcgcc
aacagcaaggcggacctctccgccacggagaagagaatcaaacagatcaacaaagagtta
gaggaagtcgagaggaaggtgcaggccgctgtgaaaaacgagaaggctttgaaactggag
ctcgataagtggaggaataaggaaaaagaagcgcaagacaagatggaggaagatgccaag
ggtctagaaaagatggcgtcgaaggaagtacttctgcaggagaagatccaggagtcgctg
gacaagatagcagccctcgggactctcccgaacgcgccggagctacacgccaagtaccag
aagatgtcattgaagcagttatttaaagagctagaaaaagctaatcaacatctcaagaaa
tacaatcatgttaacaagaaagctttggaccagttcatcagtttctcagaacaaaaagag
aaattatacaaacggaaagaagaactagacattggtggcgaaaagatccgcgagttgatt
gaaacgttagaacacagaaaactcgaggctatccagtttacctttaaacaagtaagcaag
aatttcacggaggtgttcaagaaactggtgccgcacggacgaggcagccttatcatgagg
gtcggccctgatgatggatccgagattaatcctgagcgcgcgaacgcggaccagttcacg
ggcgtgggcatcaaggtgtcgttcacgggcggcgagggggacatgcgcgagatgaaccag
ctgtcgggcggacagaagtcgctggtggcgctggcgctcatcttcgccatacagaagtgc
gaccccgccccgttctacctcttcgacgagatcgaccaggctctcgacgcccaacacaga
aaggccatcgccaacatgatacacgagctatccacgtccgcccagttcatcacaaccacc
ttcaggccggagctgctggagcatgcgcacaagttctacggcgtgaagttccgcaacaaa
gtgtcgcacgtggagtgcgtgtcgcaggaggaggcgagggacttcgtcgaggacagcgcc
acgcatgcgtaa
DBGET
integrated database retrieval system
