Manduca sexta (tobacco hornworm): 115446317
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Entry
115446317 CDS
T07401
Name
(RefSeq) LOW QUALITY PROTEIN: elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
115446317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msex03009
]
115446317
Ribosome biogenesis [BR:
msex03009
]
Eukaryotic type
Pre-60S particles
GTPases
115446317
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
GTP_EFTU_D2
EF-G_D2
EFG_III
MMR_HSR1
Syntaxin_2
EFG_IV
Motif
Other DBs
NCBI-GeneID:
115446317
NCBI-ProteinID:
XP_030028787
LinkDB
All DBs
Position
8:complement(5832133..5964069)
Genome browser
AA seq
1064 aa
AA seq
DB search
MRLVDSPKLLQLQNKPSNIRNICIVAHVDHGKTTLADSLISSNGIISQRMSGKLRYMDSR
PDEQQRGITMKSSSISLYHAANEQEYLVNLIDSXGHIDFSSEVSTAVRLCDGAIVVVDVV
EGVCPQTRLVLKQAYLENIKAVLVLNKIDRLIVEMQLTPLDAYVHLTQVLEQVNAVMGEL
FATEVFENEETTIGKQQEKEKLNKEDNNFYDWTSALEDADDSHLYFSPEQGNVVFASAVD
GWGFTVHTFAKLFSDKLGVKEELLSKVLWGDFYLNTKTKRFMKGAQEKAKKPLFVQVVLD
NLWNVYETIVMRNEKEKVPVICEKLGVKLTTRDLRHTDSRVQLQSLMVQWLPLSYTVLNM
VCKKLPSPKELIPEKVERLMCSRIRDFDSYLPETQKLKEDFLACDSNEDRPLIIFISKMF
SVDKSMLPENKPKALTPEEMALRRERARLLREERKNNANDEIVPMDEKKEPESSEIIEDE
KEKDVDQPAFIAFARIFSGKVRKGDKVYVLGPKHDPSKVLNIKDIAIDSNKKLKDLHNDE
HVTCTEIKSLYILMGRELEEIEEAIAGNIIGIGGLEDHVLKTATLSSTIACPAFSEIQSS
VVPILRVALEPTYPSQLPQLVKGLKLLNQSDSCVQVLLQETGEHVIVTAGEVHLERCLED
LRNHYAKIPITVSEPIVPFRETVVEPPKIDMANEEIETQKVDKTITKEDPVITVYTNNKQ
SRIQIRAKPIPNEITTLLDKSSDLLKAVSQHIKTLQTIAKNKKLETQLEGLYLNGTKHKL
SDRMLKLVQNFIDELQNICAKLGPEWKDLVNQIWSVGPRYCGPNMLLNRTSDYSTKYLHY
DNEIKDDPRFEYEGSFVNGFQLATLAGPLCEEPMMGVAFCVEEWTLEKSPADDVAQTFGP
LSGQIVSAVKDGCRRAFQVQPQRLMAAMYSCDIAVDQKVLGKLYAALGRRGGRVVGSDLQ
TGSASFRVQALLPVAESFKFALELRTHTSGLAAPQMLFSHWEVIDIDPFWRPRTEEEYLH
WGEKWDGVNRAKGYMDAVRARKGLATDKQLVQHAEKQRTLSKNK
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgcggctcgtggattcgccgaaacttttacaacttcaaaacaaaccttcgaatatccgc
aatatttgcatcgtggcccacgtggaccatgggaagactacgctggcagactccctgata
tcgagtaatggcatcatatcgcagagaatgtctgggaaactgcgttatatggatagtagg
ccagacgaacaacagcgaggtattacaatgaaaagcagtagtatctcgctgtaccatgct
gctaacgagcaagaatatctggtaaacttgatcgattccnttggccacattgatttttcg
agtgaagtgtccactgcagttaggttatgtgatggtgcaattgttgtggtagatgtggtg
gaaggtgtatgtccacaaacaagacttgtactgaaacaagcatacttggaaaatataaag
gctgttttagtgttgaataaaattgaccgtcttattgtggagatgcagttaacacctctg
gacgcgtatgtgcatttgactcaagttttggaacaagttaatgctgtcatgggtgaattg
tttgccacagaagtatttgagaatgaagaaactactatcggaaaacagcaagagaaagaa
aagctcaacaaagaagataataatttctatgattggacatctgcattggaagatgctgat
gactctcacctatacttctcacctgaacaaggaaatgttgtgtttgccagtgccgttgat
ggatggggtttcacagtgcacacatttgcaaaattattctctgacaaactgggtgttaaa
gaagaattgttaagcaaagtgctatggggcgatttctacttaaataccaaaaccaaacgt
tttatgaaaggtgcacaagagaaagctaagaagccactttttgttcaagttgtgctagat
aacttatggaatgtttatgaaaccattgtaatgaggaatgaaaaggaaaaagtgccagtt
atttgtgaaaaacttggtgtcaagttaacaacaagagatctaaggcatacagattcgcga
gtccaactgcaatctttaatggttcaatggcttcctttatcatacactgtacttaacatg
gtatgcaagaaacttccgtcccctaaagaattaattcctgaaaaagtagaaaggctaatg
tgctcaaggatacgcgacttcgattcatacttaccagagacacagaaattaaaggaggac
tttttggcgtgtgatagtaatgaagacagacctctaataattttcatatcaaaaatgttt
agtgttgataaaagcatgttaccagaaaacaaaccgaaagcattaactccggaagaaatg
gcattgaggagagaaagagcgagacttttaagagaagagagaaaaaataatgcaaatgat
gaaatagttcctatggatgaaaagaaagaaccagaaagcagtgaaattattgaagatgaa
aaagaaaaagatgtagatcagccggcatttatagcatttgctagaatatttagtggtaaa
gtgcggaaaggagataaagtttatgtgttgggaccaaaacatgatccttctaaagtgctt
aacataaaagacattgctatagatagtaacaaaaaattaaaagatttacacaatgatgaa
catgttacttgtacagaaatcaaatcactgtatattcttatgggaagagaattagaagaa
atagaggaagcaattgctgggaatataataggtattggaggtttagaagaccatgtctta
aaaactgcaacgcttagcagtactatagcttgtccggcgttcagtgagatacagtcttca
gtagtacctatactcagagtggcgttagaacccacgtatccttcgcagctaccgcaactt
gtcaaaggtctcaaactactaaatcaatcggattcgtgtgtacaagtgttattgcaagaa
acaggcgagcatgtaatagtgactgctggtgaagtacatttagagagatgccttgaagat
ttaagaaatcactatgccaaaattccaataacggtctcagaaccaatcgtaccattcaga
gaaaccgtagtagaacctccgaaaatagacatggcgaatgaagaaatagaaacacaaaag
gtcgataagactatcacaaaagaggacccagtcataactgtatacacaaacaataaacaa
agtagaatacagataagagcaaaacctattcctaacgaaattaccacactcttagacaag
tcctcggatttactgaaagcagtatcacagcatataaagacactgcagacgatagcgaag
aataaaaaattagaaacacaattagaaggattatatctaaatggtacaaaacataaactg
tccgatcgaatgttgaaattagtgcaaaatttcatcgatgaattgcaaaacatttgcgcc
aaacttggtcccgaatggaaggatttggtgaaccaaatttggtctgttggtccaaggtat
tgtggacctaatatgctgttgaatcggacgtcggattatagtacgaaatatttgcattac
gataatgagattaaagatgatccgaggttcgagtatgagggtagttttgtaaacggattc
caattggcgactttggctggaccgttatgtgaagagccaatgatgggtgtggccttttgt
gtcgaagagtggacgttggagaaatccccggcggatgatgttgcacaaacatttggacca
ttgtctggtcaaatcgtgtcagcagtaaaggatggttgcagaagagcattccaggtgcaa
ccacagaggctcatggcggcaatgtattcgtgcgatatcgccgtcgatcagaaagtacta
ggtaaactgtacgcggcactgggccgccgtggtgggcgcgtcgtcggcagcgacttgcag
accggctcggcttcgttcagggtgcaagccctactgcccgtagcggagagcttcaagttc
gcgctcgaactgcgaacgcacacgtcagggttggcagcaccgcagatgttgttcagccat
tgggaggtaatcgacatagacccgttctggcgtccgcgaactgaagaagaatatctccac
tggggcgagaaatgggacggagtgaaccgagctaaggggtacatggacgcggtgcgagcg
aggaaaggtcttgccactgacaaacagttggtccaacacgcagagaagcaacgaacgctg
tccaagaacaaatag
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integrated database retrieval system
