Manduca sexta (tobacco hornworm): 115446379
Help
Entry
115446379 CDS
T07401
Name
(RefSeq) LOW QUALITY PROTEIN: atrophin-1
KO
K13096
splicing factor 4
Organism
msex
Manduca sexta (tobacco hornworm)
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msex03041
]
115446379
Spliceosome [BR:
msex03041
]
Complex A
Other components
Complex A specific factors
115446379
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
G-patch
G-patch_2
Surp
Motif
Other DBs
NCBI-GeneID:
115446379
NCBI-ProteinID:
XP_030028892
LinkDB
All DBs
Position
8:5737664..5752054
Genome browser
AA seq
923 aa
AA seq
DB search
MIHFKDNKNKSALSTRWAQMSKQEQIIEKKKMEIQAKLEAQKQAAALAAQAKLANPAPQD
EKGNANIFSNDGSFMSQYKALLEKQKQENQDKEEKEKEKQKSDEKQKIKEEKQQNDHYDD
SPGPKEEHKKYNDKGSRDKHRRWSDKGRSRAHSPSTPVVEDRKKFSENKTPNHIPPLMQI
PIMPPTTQSPESDYQWRSGPHNSDDESDTNSLPSNSIGPGPMPPGSMHPGFMGPGMMGPG
PNMGSDPNMVPNSNMGTGFNMGPGPNMGPGPNMGPGPSMGPGPSMGPGPSMGPGPGMGPG
PSMGPGPNMGPGPNMGMGPGPHMGPGPHIGPGPNMGSGPNMGPRPNMGPGPMMGPGGPNM
PPMPPNGPMPPFMGGPPNFPMPPNFMGPNGPGGPCGPGPMPPNMCGPNMSGPRPNGPMPP
FFGPPFPNPMMGPGGPPMPPNAGNMPFMGPPPPFGPNGPPNFDNGNGPPRPFLPPNSMPP
NSKANLENLGNNSPSDSMKQKGLPANPSNANSGSSSSNTSQVFSPDMFPPSVHRAASEVA
SNGDHWENVLKAIHSQDQNLWFLHNTNSNEYKAFRELINKMRRDGVGEKKHEVKPRINIE
PEFSLEDDDSYDNRPSFKDESKDRDEDSKHYRRDVKREQASSQSDEEPEAKRERKRKKKS
RWSDDPPAADIKPPGLITPLAAIIPGAKLAKIDEEGLKLTNVNKNNQALMQYAMTNYGTT
NLSAEDWKKCEDNFKLNLLYQDMLKKRQEVERLAAAGKYKYEYDSDEDTNEGTWEHKLRA
KEMSATEKWADELTKQAAGKHHIGDFLPPEELKKFMEKYSALKNGKEPDLSDYKEFKLKE
DNVGFKMLQKLGWTEGQGLGAEGSGIVEPINKANQPVANLGLGASTSDGVSPDDDEFDAY
RKRMMLAYRFRPNPLNNPRRPYY
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgatacattttaaagacaataagaataaatcggcactgagtacaagatgggctcaaatg
tcaaagcaagaacaaattatcgagaaaaaaaagatggagatccaggcaaaattggaggct
caaaaacaggcggctgcactcgcggctcaagctaaactagcgaaccctgctcctcaggat
gagaaagggaatgccaatatattttccaatgatggtagttttatgagtcaatacaaagcc
ctgcttgaaaaacaaaaacaagaaaaccaagataaagaggaaaaggaaaaagaaaagcaa
aaatctgatgaaaaacagaaaattaaagaggagaaacaacaaaatgatcactatgatgat
agccctggaccgaaagaagaacacaaaaagtacaatgataaaggatctagagacaaacac
cgacgatggagtgacaagggtcgcagccgagcccatagcccctcaacacctgttgttgaa
gatagaaagaaattttctgaaaacaaaacgcccaatcacattccacctctaatgcaaatc
cctatcatgccacccactacacaatctcctgaatctgattaccagtggagatcaggacct
cataattcagatgatgaatcagatacaaattctttaccgtcaaactcaataggtcctgga
ccaatgccaccaggttcaatgcatcccggtttcatgggtcctggtatgatgggacctgga
ccaaatatgggatcagatcctaatatggtaccaaactctaatatgggcactggtttcaat
atgggtccaggaccaaatatgggaccagggcctaatatgggtcccggacctagtatggga
ccagggcctagtatgggacccgggcctagtatgggacccgggcctggtatgggacccgga
cccagtatgggacccgggcctaatatgggacctgggccgaatatgggtatgggccctggt
cctcatatggggccaggtccacatattggtcctggtccaaatatgggctctggccccaat
atgggaccaagaccaaatatgggtccgggtcctatgatgggccctggcggtcctaatatg
cccccaatgccccctaatggtccaatgcctcctttcatgggtggacctcctaattttccc
atgccacctaattttatgggtccaaatggtcctggaggaccgtgcggtcctggacccatg
ccaccaaatatgtgtggtccaaatatgtcaggtcctaggccaaatggccctatgccccca
ttctttggtccacctttccctaatccaatgatgggtcctggtggaccaccaatgcctcct
aatgcaggcaatatgcctttcatgggtccacccccaccttttgggcctaatggccctcca
aactttgataatggcaatggtccacccagacctttcttgccacctaattctatgccaccc
aattctaaagcaaatctagaaaatctaggcaataattcaccatctgattccatgaaacaa
aaaggtctacccgctaaccctagcaatgcaaacagtggctcttcatcaagcaatacatct
caagttttctctccagatatgttcccgccgtcagtgcaccgagccgccagcgaagtcgcc
agcaacggtgaccactgggaaaatgtcctgaaagcaatacactcacaagatcaaaatttg
tggttcctacataacaccaactcgaatgaatataaggcgttcagggagttaattaataag
atgagaagagatggtgtgggtgaaaagaagcatgaagtgaaaccgaggataaatatcgag
ccagagttcagtttagaggatgacgatagctatgacaacagacctagttttaaagacgaa
agcaaggacagagacgaggatagtaaacattatcgccgagacgtcaaacgggagcaagcc
agctcgcagagtgatgaggaaccggaagccaaacgtgaacggaaacggaagaagaaatcg
cgctggagcgatgatccaccggcggccgatatcaagccacccgggctgattacaccgttg
gctgccatcattccaggcgctaagttagcaaagatcgacgaagaaggactaaaattgacg
aatgtgaataaaaataaccaagcactgatgcagtatgcaatgacaaattacggaacaaca
aatttaagtgcagaggattggaagaaatgcgaagacaactttaaacttaaccttctgtat
caggacatgttaaagaaacgtcaggaggtggaacgtttggcggcggcgggtaaatataaa
tacgaatatgacagcgacgaggacaccaacgaaggcacctgggaacataagttacgagca
aaagaaatgagtgcgacggagaaatgggctgatgaactgacaaagcaggcagcgggcaaa
catcacattggagactttctgccgcctgaggagttaaagaagttcatggaaaagtattcg
gcgttgaaaaatggcaaagagccagacctgagtgactacaaggaattcaaattgaaagag
gataacgtgggttttaaaatgctgcagaaactcggatggacggaaggccaaggcttaggc
gcggaggggtcgggcatcgtcgaaccgatcaataaagcaaatcagccagtggctaacctg
ggtttgggcgcttccacgtctgacggcgtctctccggacgacgacgaattcgacgcgtac
aggaaacgcatgatgcttgcgtacagattcagacccaatcctttgaacaacccacgaaga
ccttattattga
DBGET
integrated database retrieval system