Manduca sexta (tobacco hornworm): 115446460
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Entry
115446460 CDS
T07401
Name
(RefSeq) DNA excision repair protein ERCC-6-like
KO
K10841
DNA excision repair protein ERCC-6
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
115446460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msex03036
]
115446460
03400 DNA repair and recombination proteins [BR:
msex03400
]
115446460
Chromosome and associated proteins [BR:
msex03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
115446460
DNA repair and recombination proteins [BR:
msex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
115446460
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
AAA_14
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
115446460
NCBI-ProteinID:
XP_030028988
LinkDB
All DBs
Position
12:complement(9340831..9343996)
Genome browser
AA seq
963 aa
AA seq
DB search
MVDINKYLESQLALAKLRSECKSKKDGVSLKSRTAADHISKRQVKKFAKVSQKEKVDQKS
KLPQLELNKSDLKTEPAVSASIAENSDDDEDYVPSEDEDETIHLCPLKVSSRAKESVQKI
IDDGDTSFYNERIKTWRHNLAMACAGDNKVEPLSADIRYILNGNEDPEENHELQNGYLVP
NYIWKQLYKFQRTGVKWLWELHQVQSGGLLGDEMGLGKTIQIIAFLTGLSKTNSGSWDGL
GPSIIVAPATVIYQWVSHFHYWCPHLRVAVLHHTGSHSGNHNKLVRDIYASHGILLLTYA
GIVKYHKEIMARKWHYLILDEGHKIRNPDTQVSKLIKKIQTPHKLIITGSPLQNSLQELW
SLFDFMKPGLLGTYNTFMIHFAQPITQGGYANATEMQEATALEIAKALKNIITPYMLRRS
KTEVQDHIKLPEKNEQVLFCALTVEQKDLYLGYLMGSTVRSILDKENKYGDPLRARVLVA
LTTLRKICNHPDLYLYEAQEDCEQVDADKFGHWKRSGKMSVVNSLLKIWQKQGHRALIFT
QSRAMLCILEQYLQNQKYKYLKMDGSVSVGQRQNLIRTFNEKPEYLVFLATTRVGGLGVN
LTGADRVIIYDPDWNPATDDQAKERAWRIGQARNVTVYRLLSAGTIEEKIYQRQIFKHFL
SNKILLDPNQKNVLSTSTLQGLFSLEEPNFEGDTETASLFKHTKINVSNSKNTKDKTHSR
NDLHLKKLEAMKKMAKAISKKISQDSVEYKNNVEVKDPRIEYKRKQDILRDPPVIETPEI
NLVDDKETNVPFEHVLSELDIINMHIKKDYEETLIKNVLKNTNPEEKEIDDDIEPSDTSH
ININESSKVVTSSYNDNSKQVCNKNINNIKKGHKRKHTSLMDEKVENLVTVKKVKKKVHK
SEIQSGSDDDYVLSKLFAKAAVKNALQHDVVVGLAEKEKRHRMKEEAEKKAKDAVRALKF
SST
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggttgatataaacaaatatctcgaaagtcaactagcactggctaaactaagatctgag
tgtaaatctaagaaagatggtgtttctttaaaaagtagaactgcagctgatcatatttcg
aaaagacaggtaaaaaaatttgcaaaagtttctcaaaaagaaaaagtagatcaaaagtca
aagttacctcaactggaactaaacaaatcggatcttaaaacagaaccagctgtaagtgct
tctatagcagagaattctgacgacgatgaggattatgtgccgtcggaagatgaagacgaa
actattcacttatgtcctttaaaagtttcatctcgcgccaaagagtccgtacagaagatc
attgatgatggtgacacaagtttttacaatgaaaggattaagacttggcggcacaatttg
gccatggcttgtgcaggagataacaaggtagaacctttatcagctgatattcggtatata
ctcaacggaaatgaagatccagaagaaaatcacgaacttcagaatggttacctggtgcct
aattatatttggaaacagttgtataaatttcagagaactggagtgaaatggttgtgggaa
ttacatcaagtgcaatctgggggtttactgggagacgaaatggggttaggcaaaactata
caaataatagcatttttaacaggactctcaaaaacgaattcaggtagttgggatggcctt
ggacccagtataattgtagcaccggcaacagttatttatcaatgggtttcgcattttcac
tactggtgtccccatttacgagtagctgtgcttcaccacacgggttcacacagtggaaat
cacaacaaacttgttagggatatatatgcttctcacggtatattattattgacatatgct
ggtattgtaaagtatcacaaagaaataatggccagaaaatggcattatctaattttagat
gaggggcataaaatcaggaatccagatactcaagttagcaaacttataaagaaaatacag
acaccgcataaactaattataactggttctccacttcagaatagtttgcaagagctgtgg
tctctgtttgactttatgaaaccaggccttttaggaacatacaatacatttatgatacat
tttgctcaacccattacccaaggaggatatgccaatgcaactgaaatgcaagaagcaact
gcattagagatagcaaaagcattaaaaaatattataacaccttacatgttaaggcgtagt
aaaactgaagttcaagaccatattaaactacctgaaaaaaatgagcaggtcctattttgt
gcactgacagtagaacaaaaagatttatacttgggttaccttatgggtagtacagtaaga
agtattttagacaaggaaaataaatatggcgatcctctgagagcaagagtgttggtggcc
ttaacaacattacgaaaaatatgcaaccacccagacttatacctttatgaagctcaagaa
gactgtgaacaagttgatgctgacaagtttggtcactggaaaagatctggtaaaatgtca
gtagtaaattcattacttaaaatttggcaaaagcaaggacatagggcactcatatttaca
cagtcaagggctatgttgtgtattttagaacaatatttgcaaaaccaaaaatacaaatat
ttaaagatggatggatctgttagtgttggtcaaagacaaaacctaattaggacatttaac
gaaaaaccagaatacttggtttttctagccactacaagagtgggaggcttaggagtaaac
ttaacaggtgcagaccgagttattatttatgaccctgattggaacccagccacagacgat
caagctaaagaaagagcttggagaataggtcaggcaagaaatgttactgtttataggctt
ctttcagcgggaacaattgaagaaaaaatctatcaaagacaaatatttaaacattttcta
agtaacaaaattttactagatcccaatcaaaaaaatgtactcagtacaagtactttacaa
gggcttttctcactggaagagccaaattttgaaggtgatactgagacggcttcattattt
aaacacacaaaaataaatgtaagtaactctaaaaacacaaaagataaaactcattcgaga
aatgatttgcatctgaaaaaattagaagcaatgaaaaaaatggcaaaagctataagtaaa
aaaatatcacaggattcagtggaatataaaaataatgttgaagtgaaagatcctagaata
gaatacaaaagaaaacaagatatattgagagatccaccagtaattgaaacacctgaaatt
aatttagttgatgacaaagagacaaatgtcccctttgaacatgtgttatcagaattagat
ataatcaatatgcatataaaaaaagactatgaagaaactttaatcaaaaatgtcttgaaa
aatacaaatccagaagagaaagaaattgatgatgatatcgagccatctgatacaagtcat
attaatatcaatgaatcttccaaagttgtaacatcctcttataatgataattcaaagcaa
gtgtgtaataaaaatattaataatattaaaaaaggccataaaagaaagcacaccagtttg
atggatgaaaaagtggaaaatttagtaactgttaaaaaagtaaaaaagaaagtacataaa
agcgaaatacaatcaggtagtgatgatgactatgttttaagtaaattatttgctaaagca
gcagtaaaaaatgctttgcagcatgatgtagttgtgggtttagcagaaaaagaaaaaaga
catagaatgaaagaagaagctgagaaaaaagcaaaagatgcagttcgagctttaaagttt
tcttccacataa
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