Manduca sexta (tobacco hornworm): 115446475
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Entry
115446475 CDS
T07401
Name
(RefSeq) ribonuclease Z, mitochondrial isoform X1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
msex
Manduca sexta (tobacco hornworm)
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msex03016
]
115446475
Enzymes [BR:
msex01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
115446475
Transfer RNA biogenesis [BR:
msex03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
115446475
Prokaryotic type
115446475
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
115446475
NCBI-ProteinID:
XP_030029004
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Position
12:complement(9210072..9227373)
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AA seq
1317 aa
AA seq
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MYGIGALFSKRVVSSCDGRCYSTSRNKKLFQFLAKMPKETAARIAVAQRQRQVISKKSEK
YTPSTVYLQVMGSGARGAANTLYLFTDQKRYLFNCGECTQRLAHEHKVKLSRLEHVFITS
KTWRNIGGLPGLSLTLQDVGIPKITLHGPEGLDELYQATRRFVIMKEMNVKMAQCSPSED
FEDNVMTVKYVLLGPHDSILPNVNQDLKPAAKKPKLDNNSDKDYEEFIHDDTDYYKPEIR
NMEAKSKGASPEKSKSKSSSDKDMKKKTEKVLYDLQKKTKCTVAYICTLKKRLGTLDLAK
CVERGVKPGPQLGQLKNGQDVVLPDGTLVLSKDVKTPDDPGPVFIIIEVPELSYLKVSEF
AAHFDNGDNPPENIPTIIVHYTPPNVFNHPTYREFMSMFGASTRHLVLNAQNSCLGSEAV
HRSQHKLHLLDADVFPLLRDASVPAEWSAPANSKHEHLKGLDELKNKIALAQFQNIINME
GSCKGDGSVASDEDPHAKLEIISARTLTMFQLRPKKQLDRSAEPKLHIQEYIEETMDIDG
FVGSLEQFRRVVDGIRYKATAHQEYPKVVFLGTGSCIPSKTRNTSAIALQIDENRSMLLD
CGEGTFGQLVRFFGPKKVNAFLRTLTAVYVSHLHADHHIGLIGILQARREAFEEVSAADK
PDPLYLLAPGQIMSWLSVYDQRFERIRQEFTLIPNQELLYNVGKVSEELTSAVLARIGVQ
DVRTCLVSHCPNAFGVAVSIDSKYKLTYSGDTIPCEELVNLGKNSTLLIHEATMEDQLAE
EARMKMHSTTSQAIEIGRSMHARYTVLTHFSQRYARLPRLNHNILHDNNSVGIAFDNMQI
SMSDLELLPHMYAPLQLLFAEHCMEMEQKAENRERKKNLTDKNPTLVEEVKHKRRCNRSP
NRGSKCSSPCHDGGSAPNSYVNYRESNASRLRQELKGMTVSGIVRPRSKSSSPTKISTRS
LSESATSKLRRETSPEKPCVQAAVEVIPTSRTISECSNSSRDARPADRLKLIKKNSTSHV
IDTRSRTLNSAAPIPKNGEILDIVTKNIKKKASIAPSTPPSRPNSGYGKPLVTPVNRKLT
VRRESPPQRQIVAHVTAEKVSPVLRSKSPVKPLKGDIKESSPSNTSKKSDINRIRQPTKA
PASGNKLRGTHDTNAKLEVKLPTRSNAANKNNISSSHNKNVNIPKHEFRPGARSWNQEPV
RKVSAPLQELNGKCKNFYISPSNGRPNSAIHSNKSFKPQLEDIKSSYLLLNKKSRDKTKH
FSANEKPDLLCISKPEAFSEHQRREQLSEARKKFQSKQFWNDAKYDKIEGLNWISWN
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atgtacggtataggtgcattgtttagtaaacgtgtagttagttcatgtgatggtcgttgt
tactctactagtcgtaataagaaattgttccaatttctagcaaaaatgcctaaagaaact
gcggcaagaattgcagtcgcacagcggcaaaggcaggttatttccaaaaagtctgaaaag
tacactcctagtacagtgtaccttcaggtgatgggttccggtgcccgtggtgccgccaac
acactgtacttattcactgatcaaaaaagatacctattcaactgtggtgaatgcacacaa
cgtctcgcccatgagcataaggtgaagctgtcgcgtcttgagcatgtcttcatcaccagc
aagacttggcggaatatcggtggcctacctggactgtccctgacattacaggatgttgga
ataccaaaaattaccctgcatggacctgaaggattggatgagttgtaccaagccacaaga
agatttgttatcatgaaagagatgaatgtgaagatggcacaatgtagtcccagtgaagac
tttgaagataatgtcatgactgtgaaatatgttttactaggtccacatgacagtattctt
ccaaatgttaaccaagatctgaaaccagcagcaaaaaaacctaagttagacaataattca
gacaaagattacgaagaatttatacacgacgacacagattattacaaacctgagataagg
aacatggaagcaaagagcaagggggcctcaccagaaaaatctaaatcaaaatcaagttca
gataaagatatgaaaaaaaagactgaaaaagttttgtacgatctgcaaaagaaaacaaaa
tgcactgttgcatacatttgcacattgaagaaacggttaggcactctggacttggccaaa
tgtgtggagaggggtgtgaagccaggcccgcagctcggtcagctcaaaaacggacaagat
gtggttttgcctgacggcactctagtgttgtcgaaagatgtgaaaacccctgacgaccct
ggacctgtgtttataattatcgaagtcccagagttgtcatatttaaaagtgtcggaattt
gcggcacactttgacaatggcgacaatccgccggagaacataccaacgatcatcgtccat
tacacaccacctaatgtatttaaccatcccacatatcgcgagttcatgtcgatgttcggc
gcgagcacgcggcacctggtgctgaacgcgcagaactcgtgcctgggctcggaggcggtg
caccgctcgcagcacaagctgcacctgctggacgcggacgtgttcccgctgctgcgcgac
gcgtccgtgcccgccgagtggagcgcgcctgccaactccaaacacgaacacctcaagggc
cttgacgagttgaaaaataagattgcgctcgcgcagttccagaacataataaacatggag
gggtcgtgcaagggcgacggctcagtggcttcagacgaagaccctcacgctaaactcgag
atcatatctgcaaggacgctcactatgttccagctgaggcccaaaaaacaattggacaga
tcagcagaaccaaagctgcacatccaagaatatattgaagagacaatggacatagacggg
ttcgtgggcagcctagagcagttccggcgagtggtggatggcatcaggtacaaggccacc
gcgcaccaggagtatcctaaggtggtattccttggtaccggctcctgcatacccagtaaa
accagaaatacaagcgccattgcactgcagatcgatgagaatcgttcaatgctgctggac
tgtggcgagggtacgtttgggcagctggtgcggttcttcgggccaaagaaggtgaacgcg
ttcctcaggacgctcaccgccgtttatgtgtcacatttacacgccgatcatcatataggt
ctcatcggcatcctgcaagcgcgccgtgaagcgttcgaggaagtatccgcggcggacaaa
ccagatcccttgtatttactggctccaggtcaaatcatgtcttggctgtcggtgtacgac
caacgtttcgagcggatacgacaagagttcactctcatacccaaccaggaattattatac
aatgtaggaaaagtgtccgaggagctgacgagcgcggtgctggcgcgcatcggcgtgcag
gacgtgcgcacgtgcctcgtgtcgcactgtcccaacgcgttcggcgtcgccgtctccatc
gacagcaagtacaagctcacgtactccggcgacaccataccctgcgaggaactcgtaaat
ctaggtaagaactcgaccctactgatccacgaggcgacgatggaagaccagttggcagag
gaggcgcggatgaagatgcactcgacgacgtctcaagccatcgagattgggcgcagtatg
cacgcgcggtacaccgtgctcacgcacttcagccagcgatacgctcgcctgccgcggctc
aaccacaacatattgcacgacaacaacagcgtcggcatcgccttcgacaacatgcagata
tcaatgagtgacttggagttattgcctcacatgtacgcgccactacagctattgttcgcc
gagcattgcatggaaatggaacaaaaggcagaaaatcgcgagaggaaaaagaacttaact
gataagaatccgactttggtggaagaagtgaaacataagcggcgctgtaaccgatcaccg
aaccgagggagcaagtgctcgtccccttgccacgatggtggctccgccccgaactcttac
gtcaattacagggagagtaatgcctccagactaagacaagaacttaaaggaatgaccgta
tctggaattgtgagaccacgtagcaaatcatcgtcaccaacaaaaatatctacaagatca
ctaagcgaaagcgctacatccaagctgcggcgtgaaacttcgccagaaaaaccatgcgtg
caggcagctgtggaagtgatcccaacatctcgtactatcagcgagtgttccaactcgagt
cgagacgccagaccagcagatcgactcaaactgatcaagaagaattcgactagtcatgta
attgatactcgttctagaacactaaatagcgctgctcccattccgaagaacggagaaata
ttggatattgtgacgaaaaacatcaaaaagaaggcttctattgcgccatcaaccccgcca
agtcggccgaattcgggttacgggaagccattggtgactcccgtgaataggaaattgaca
gtcaggcgagaatcgccacctcaacggcagatagtggcgcatgtcactgcagaaaaagta
tctccagtccttcggtcaaaatctccggttaaaccgttaaaaggagacatcaaagagtca
tcaccttcgaatacttcaaagaagagtgatatcaacagaattagacaacctacgaaggct
ccggcctctggaaacaagttgcgcggaactcatgacactaatgccaaactagaggttaaa
ttacccacgagaagcaatgccgctaacaaaaataacatcagttcttcacacaataaaaac
gtaaacatacctaagcacgagttccgtccaggtgccagaagctggaatcaagagcctgta
cgtaaagtatctgcaccactccaagaattaaatggaaagtgtaaaaatttctatatcagc
ccttcaaatggtagaccaaattccgccatacatagtaacaaaagctttaagccgcaatta
gaagatataaaaagctcttatctgctgcttaataagaaaagtcgagataaaacaaaacat
ttctctgcaaatgaaaagccagatttattgtgcatatccaaaccagaagcatttagtgaa
catcagagacgggaacagttgtcagaagcaagaaagaagttccagagtaaacagttttgg
aatgatgcaaaatatgacaaaattgaaggtttgaactggatttcatggaattaa
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