Manduca sexta (tobacco hornworm): 115446625
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Entry
115446625 CDS
T07401
Name
(RefSeq) E3 ubiquitin-protein ligase listerin
KO
K22377
E3 ubiquitin-protein ligase listerin [EC:
2.3.2.27
]
Organism
msex
Manduca sexta (tobacco hornworm)
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msex03009
]
115446625
04121 Ubiquitin system [BR:
msex04121
]
115446625
Enzymes [BR:
msex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115446625
Ribosome biogenesis [BR:
msex03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
115446625
Ubiquitin system [BR:
msex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115446625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ltn1_1st
UBC_like
zf-RING_2
FANCL_C
zf-ANAPC11
zf-rbx1
RhoGAP
RINGv
zf-RING_16
zf-RING-like
C1_1
SLX1_C
Motif
Other DBs
NCBI-GeneID:
115446625
NCBI-ProteinID:
XP_037296543
LinkDB
All DBs
Position
20:complement(8066453..8081478)
Genome browser
AA seq
1737 aa
AA seq
DB search
MGGKPKQSQRTKNNVKPSSSGRSAEIINSAKIDTNLVCVGGGKILPALFPTLAASASMEN
DIDPEFQMCIKKLNKKDPITKTKALQELTELVNNSKVDDVVAMLPSWAHYYKMLSFDLDR
KVREYTQACHGAVVGACGRRAAPWLRRVVPAWLLALHDAHAPAQAHAARALAKTFPDNKL
PDVISFCKTEILTHIVDNLMSNPDSVLSKKIENAEDKEAQYNCIVSSSLRGLTLLTQRLA
PAHHDWLWEQLDQLLFHHNSFWKLASHNYHQIRAAWYETISHIIERFKGVFGDKYGQKTL
RILMGAGKDSNASVAAGLWNCLVMIMHNVEGWHTYLDKKQLIVKRIIDVLENGGWGDTKH
LTSILLPLLASLPEHLLTKEFYESFFNAMFTGLEKKSILSSKSERQLWIANLAECLRYLS
IRQNDFVVEVTTSVHRSWLEMALSTEHAGQLRNNLIKFSATSMASLVKYWLKQSKEPNGE
KYDQLVRNFWQNIASKLSTQIDKLSSEEEDIARHIDGHVLLLQTLKISFLHEPKKAQSIK
FEDSEVMVQRETASPEKCDPTIVERFKHNLENVVQNVCYQYLQFAGEKKLVNAVLTPLLS
LLIEFNQREVLLAVARQFDVDSLSKFYEKVFREWLFDEALRCKVVVDVVFLMLQHMTEEE
QEATLDSFNQFPVSVAEWCLAVSLSHPHRARRCVRRWVRGEAATRALLRACAALVTHDGA
STGASTGGARNLLLMCFSHDDREELIISADAVTRIVQLVSTALREQSSACLEQLSRLGAQ
LASALLIRADTHHAAPDLLIELIGVTLRVPRGDSRLSVDTWCELRSSAQDGVAALPPQQR
ARLLRRVAALHDQHVRSRNNKNPKICIDKIEQICSLSPYILTANSRLPEDLAEIVMFTKA
LLEVEAPSIEYYAVRYDCVHSKLNCPFDDDNDIIKRVAQDSDDAELSKSDLVAFMNSLLL
RAMYLRTLFLHKPDDEEDEPTWCERLLSEQYFQTEFCKVLYDYMIVCTLHEGYGFWPHHK
ILRDGKAKLDMLLDDIINETSTTLRNTIQCQLSHSAAATGYYWSYARRHYELRARVEPAA
LGARALPHGAGDLQLAQLRDIVTGNGFFHTLQANLQGSTDAQSDARAQYLVMVRALAASA
SRAGELDRVFTCELLANCATCHLDMLVNAYYRHNHLMLFDTDISQAPWHAAVCNAAALEY
LTTLVTREGWDLPAHHWDFINIACCSVATSLEKSKDAWGTTKVSMVARSLLRLYVAVHTF
VASVPAQCEKQEPAAHVAALPEEWRDIFEPSVHDSLFHLMLHVLQSDSAAPTCPRVAVLH
ALAQGSAHLDWSCLPKPSQLDVFALSRVCARAAECLARPVHVAYKYLAYHLLAMLVDPLI
LEDMGKLSMWSEQTSGVGQEEYDRPKLALEYFDEQLDYLLDIVNEVVANVQLGEGVCEVT
PFSDSHSSCVGWLLLLRLSHKLFARARSTVALHYLEIYRIKNFAEPVLNAALRLLPEEVF
TYTEDNVGTTPVPTQYTDMFFHNTPLDMYAPVSSSVVSQLACGAVCAGVSCAAGGARAWC
AAASAPRARALRRLARAFLAPTLVRDHFARVMRAAPTFTNAVITTYWSTYEVVCVYTVED
HPIELHIALAKDYPIGVANVYTPSLPTPGADTNWVALYLAHQNGSVVEAVRMWMAGVETR
VENSPVCYICYARLHPSSGKLPRLACHQCHNKFHASCLSKWFTTSSKSSCPLCRAQF
NT seq
5214 nt
NT seq
+upstream
nt +downstream
nt
atgggtggtaaacccaaacaaagtcagaggacgaagaataatgtcaaaccatcaagcagt
ggacgcagtgcagaaataataaattcagcaaaaatagacacaaatctagtatgtgttgga
ggagggaagattttgcctgctctgttccctactctagctgcatccgctagcatggagaat
gatattgatccagaattccagatgtgcattaaaaaacttaataaaaaggatcccattact
aaaactaaggctttacaagaactaacagagttggtgaacaacagcaaagtggatgatgtg
gtagcgatgctaccgagctgggcacattattacaaaatgttgtcctttgacctggaccgg
aaagtgcgcgagtacactcaggcgtgtcacggcgcggtggtgggcgcgtgcgggcggcgc
gcggcgccgtggctgcggcgcgtggtgcccgcgtggctgctggcgctgcacgacgcgcac
gcgcccgcgcaggcgcacgccgcgcgcgcgctcgccaaaactttccctgacaataaactg
cctgacgtgatatcgttctgcaagacagagatactgactcacatcgtagacaatctgatg
tcaaaccctgattcagtgttgagtaaaaagatagagaacgcggaggacaaggaggcgcag
tacaactgcatcgtgtcgagcagcctgcgcggcctgactctcctcacgcagcggctggcg
cccgcgcaccacgactggctctgggaacaactcgaccaactgctcttccaccacaactcc
ttctggaaactcgcctcgcacaactaccaccagatacgcgccgcgtggtatgaaaccatc
agtcatataatagagcggttcaaaggcgtgttcggcgacaagtacggacagaagacgttg
cgcatcctcatgggcgcgggcaaggactccaacgcgtccgtcgccgcgggactctggaac
tgtctcgtcatgatcatgcacaatgttgagggttggcacacatacctggacaagaaacag
ctcatcgtcaaaaggataatagatgtgttagaaaatggcgggtggggcgacaccaagcac
ctgacgagcatcttgctgccgctgctcgcgagtctgcccgaacacctcctcaccaaggag
ttctacgaatccttcttcaacgctatgtttactggccttgaaaaaaaatctattttaagt
tcaaagagtgaacggcagctgtggattgctaatttagcggaatgtctgcgatatctgtcg
atccgacaaaatgacttcgtggtggaagtgacgactagcgtgcacagaagttggctcgag
atggcgctgagtaccgaacacgcgggacagctgcgcaacaacctgatcaaattttctgct
acaagcatggcctctctcgtcaaatattggctcaaacagtccaaagaacccaacggagag
aagtacgaccagctggtgaggaacttctggcagaacatcgcctcgaagctttccacgcaa
atcgacaaactatcctctgaagaggaggatatcgctcgccacatcgacggacatgtttta
ctgctgcagacattaaagatatcttttctacacgaaccaaagaaagctcaaagtattaag
tttgaagattctgaagttatggttcaacgagagacggccagtccagaaaaatgtgatccg
acaatagtcgagcgtttcaaacacaacctagagaatgtggtgcaaaatgtatgctatcaa
tatcttcagtttgctggagagaaaaaattggtgaatgcggtattaacgcccttattgagt
cttctaatagagttcaatcagagggaggtgttgctggctgtggcgaggcagttcgatgtc
gactcgctgagcaagttttacgagaaagtgttcagagagtggttgttcgacgaagcgctg
cggtgcaaggtggtggtggacgtggtgttcctcatgttgcaacacatgaccgaagaggaa
caggaagccacgctggattcttttaaccagttcccggtgtcggtggcggagtggtgcctg
gcggtgtcgctgtcgcacccgcaccgcgcgcggcgctgcgtgcggcgctgggtgcgcggc
gaggcggcgacgcgcgcgctgctccgcgcctgcgccgcgctcgtcacgcacgacggcgcc
agcacgggcgccagcacgggcggcgcgcgcaacctgctgctcatgtgcttctcgcacgac
gaccgcgaagaattaataatcagcgcagacgcagtgactcgtatagtacagttggtgagc
acggcattacgggaacaatcttctgcctgcctggagcagctgtcccggctgggagctcag
ctggcgtccgcgctgttgatacgggccgacacacatcacgccgcgccggatctgctcata
gaactgatcggagtcacattgagggtacctcgcggcgacagtcggctgagcgtggacacg
tggtgcgagctgcgttcgtcggcgcaggacggcgtggccgctctgccgccgcagcagcgc
gcgcggctgctgcggcgcgtcgccgcgctccacgaccaacacgtgcgctcgcgcaacaac
aaaaacccaaaaatatgcatagacaaaatcgaacagatctgctctctcagcccgtacatc
ttgacggcgaactcgcggttgcccgaggacctagcagaaatagtaatgttcaccaaagct
ctcttggaagtggaagcaccttccatagagtactacgcggtgcggtacgactgcgtccac
tccaagctcaactgccctttcgacgacgataatgatatcataaagcgagtggcgcaagac
agtgacgacgcggagctgagcaagagtgacctggtggcgttcatgaacagcttgttactc
cgcgccatgtacttgaggacgttgttcctccacaagcccgacgacgaggaggacgagcca
acgtggtgcgagcgactgctctccgaacaatacttccagacagagttctgcaaagttctc
tacgattatatgatcgtttgtaccctgcatgagggatatggattctggccacaccacaag
atactccgtgacggcaaagctaagttagacatgctattagatgacattatcaacgagaca
tcgaccactctgcgcaacacaatacagtgccagttatcccattcagctgctgctacaggt
tactactggtcgtacgcgcggcgccactacgagctgcgcgcgcgcgtggagcccgccgcg
ctcggcgcgcgcgcgctgccgcacggcgccggcgacctgcagctcgcgcagctgcgggac
atcgtcaccggcaacggcttcttccacaccctacaggcgaacctgcaaggctcgaccgac
gcgcagagcgacgcgcgtgcgcagtacctggtgatggtgcgcgcgctggcggcgagcgcg
tcgcgcgcgggcgagctcgaccgcgtgttcacgtgcgagctgctcgccaactgcgccacc
tgccacctcgacatgctcgtcaacgcgtactacaggcataaccatctcatgctgttcgac
accgacatatcgcaagcgccatggcacgcggcggtatgcaacgcggcggcgctggagtac
ttgacgacgctggtgacgcgcgagggctgggacttgcccgcgcaccactgggacttcatc
aacatcgcctgctgctccgtagccacctcacttgagaagtccaaggacgcatggggcact
accaaagtgagcatggtggcgcgctctctcctgcggctgtacgtggcagtgcacacgttc
gtggcgtccgtgccggcgcagtgcgagaagcaggagcccgccgcccacgtggccgcgctg
cctgaagagtggcgcgacatcttcgagcccagcgtgcacgacagcctcttccatctcatg
ctgcacgtgctgcagtcagacagcgcggcgccgacgtgtccgcgcgtggccgtgctgcac
gcgctggcgcagggctcggcgcacctggactggagctgcctgccgaagccgtcgcagctc
gacgtgttcgcgctgtcccgcgtgtgcgcgcgcgccgccgagtgcctcgcgcggccggtg
cacgtcgcctacaagtacctcgcctaccacctgctcgccatgctcgtcgacccgctcata
ctcgaggacatgggcaagttgtcgatgtggagcgaacagacgtcgggcgtgggtcaggag
gagtacgaccggcccaagctcgcgctcgagtacttcgacgagcagctcgactacctgctc
gacatcgtcaacgaggtcgtcgcaaatgtccagctcggcgagggcgtgtgcgaggtgacg
ccgttctcggacagccactcgtcgtgcgtgggctggctgctgctgctgcggctcagccac
aagctgttcgcgcgcgcgcgctccaccgtcgcgctgcactacctcgagatataccggatc
aagaacttcgcggagccggtgctgaatgctgccctgcgactgttacctgaagaagtattc
acatacacggaggacaacgtcggcaccacgcccgtgcctacccagtacactgacatgttc
ttccacaacacgccgctggatatgtatgcgccggtgagcagcagcgtggtgagccagctg
gcgtgcggcgcggtgtgcgccggcgtgtcgtgcgcggcgggcggcgcgcgcgcgtggtgc
gcggcggcctcggccccgcgcgcgcgcgccctgcgccgcctcgcgcgcgccttcctcgcg
cccacgctcgtgcgcgaccacttcgcacgcgtcatgcgcgccgcgcccaccttcaccaac
gccgtcataactacctattggtcgacgtacgaggtggtgtgcgtgtacacggtggaagac
catccgattgaactgcacatcgctctggctaaagactaccccatcggcgtggccaacgtg
tacacgccctcgctgccgacccctggcgccgacaccaactgggtcgcgctctaccttgcg
catcagaacggttcagtggtggaggcggtgcgcatgtggatggcgggcgtggagacgcgc
gtggagaactcgcccgtgtgctacatctgctacgcgcgcctgcatcccagctccggcaag
ctgccgcgcctcgcctgccaccagtgccacaacaagttccacgcctcctgtctctcgaag
tggttcacaacaagttcgaagtcgagttgcccgctgtgtcgcgcacagttctag
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integrated database retrieval system
