Manduca sexta (tobacco hornworm): 115446709
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Entry
115446709 CDS
T07401
Name
(RefSeq) chromatin assembly factor 1 p55 subunit
KO
K10752
histone-binding protein RBBP4
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03082
ATP-dependent chromatin remodeling
msex03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115446709
03083 Polycomb repressive complex
115446709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msex03036
]
115446709
Chromosome and associated proteins [BR:
msex03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
115446709
Histone modification proteins
HAT complexes
HATB complex
115446709
HDAC complexes
Sin3A-HDAC complex
115446709
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
115446709
PRC2.2
115446709
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
115446709
Heterochromatin formation proteins
Other heterochromatin formation proteins
115446709
Chromatin remodeling factors
NuRD complex
115446709
NuRF complex
115446709
NuRF complex (fruit fly)
115446709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
EIF3I
WD40_WDHD1_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_WDR19_1st
WD40_RFWD3
ANAPC4_WD40
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
Beta-prop_SPT8
MIOS_WD40
NBCH_WD40
Beta-prop_DCAF4
YqbF
Motif
Other DBs
NCBI-GeneID:
115446709
NCBI-ProteinID:
XP_030029344
LinkDB
All DBs
Position
10:complement(9900812..9910747)
Genome browser
AA seq
432 aa
AA seq
DB search
MGDKGDGETFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEG
KDYSVHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNDKGEFGGFGSVSGKIDIE
IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPEPSGDCHPDLRLRGHQK
EGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEGRVIEAKSVFTGHTAVVEDVAWHLL
HESLFGSVADDQKLMIWDTRCNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTV
ALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQTAED
AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPETPA
SELESGVNVNHG
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgggtgataaaggagatggagaaacattcgacgacgcggttgaagaaagagtgataaac
gaggagtacaaaatatggaagaagaatactccatttctgtacgacttggtgatgacacac
gccctggagtggccctccctgacggcccagtggcttcccgatgttaccagaccggagggc
aaggattattcggttcacaggctaattttgggcacacacacatcagatgaacagaatcat
ctactcatcgccagtgttcaactgccaaatgaagatgcacagtttgatgcaagccactat
gacaatgacaaaggagaattcggcggcttcggctctgtgtccggtaaaatcgacatagag
ataaagataaaccacgagggcgaggtgaaccgcgcgcgctacatgccgcagaacccatgc
gtcatcgccaccaagacaccgtcctccgacgtgctcgtgttcgactacaccaagcacccg
tccaagcctgaaccctcgggggactgccatcctgatctgagactgcgtggtcatcaaaaa
gaaggttatggtctgtcttggaatccaaaccttaatggatacctcctgtcagcaagcgat
gaccacacaatatgcctatgggacataaacgcgacgccgaaggagggccgcgtgatcgag
gccaagtccgtgttcacgggacacaccgccgtggtggaggatgtcgcgtggcatctcctg
cacgagtctctgtttggatcggtggcagatgaccagaaactcatgatctgggatacaaga
tgtaacaatacatcaaaaccatcgcacacagtggacgcgcacaccgccgaagtaaactgt
ctcagtttcaacccatattcggaatttatactggctacgggcagtgccgataaaaccgtg
gcgctgtgggacctgcgcaacctcaaactgaagctgcactcgttcgagtcgcataaggac
gagatcttccaagtgcagtggtcaccgcacaacgagaccatcctggccagcagcggcacc
gacaggagactgcacgtatgggatctgtcgaagatcggcgaggagcagactgcggaagat
gcggaggacggcccgcccgagctgttgttcatacacggcggacacaccgctaagatatcc
gacttctcctggaatcccaacgagccctgggtcatttgttctgtttctgaggataatatt
atgcaggtatggcagatggcggagaacatctataatgatgaggagccggagacgcccgcg
tcggagctggagtccggtgttaacgtgaaccacggctag
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