Manduca sexta (tobacco hornworm): 115446789
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Entry
115446789 CDS
T07401
Name
(RefSeq) low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
msex
Manduca sexta (tobacco hornworm)
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msex04131
]
115446789
Membrane trafficking [BR:
msex04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
115446789
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
DUF5050
SGL
Podoplanin
Mid2
Motif
Other DBs
NCBI-GeneID:
115446789
NCBI-ProteinID:
XP_030029441
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Position
25:complement(5558570..5779170)
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AA seq
909 aa
AA seq
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MFLLVGCRLAALKISAKMWWFLFLCVLNIKTLGVTASNSVGAVSNSGVCPLKQFQCANGR
CIPISWVCEGDNDCGDNSDENIEECKETRTCTSSEFRCKTGRCIPLSWRCDNEKDCTDGS
DEEPGTCKVEACGPEEFTCRGKAGECVPLTWMCDDNPDCSDGSDEKACNETCRSDEFTCG
NGKCIQMRWVCDGDDDCGDDSDELKCPAPTCQPQSHFSCADGHCISAWWHCDGDIDCPDG
SDETGCATTPKVRSPCISTEFECHDRMTCVHKAWVCDGDRDCPDGGDEAPELCRGNVTCR
LDQFQCKDHSCIPGALYCNGVRDCPDGSDEFNCTRTRTVCDKKTEFDCGAGMCIPLSKVC
DKKPDCPNFEDEPRDLCDKNECEKDNGGCTQRCVDTPVGYYCDCEKGFKLVDNRTCEDID
ECADPGACSQVCINEKGTFKCECHTGYARDPRDRTRCKATEGHPSLLFARRFDIRKISLD
HHEMVAIVNDTKSATALDYVFRTGMIFWSDVTDEKIYKAPIDEGTQRTVVIGEQLITSDG
LAVDWIYNHLYWTDTGKNHIELSDLQGNMRKILIRDQLEEPRAIALNPIDGWMYWTDWGQ
VPKIERAGMDGSHRQTIVSYDVKWPNGLTLDLVRKRVYWVDAKMNTISSCNYDGSGRRLI
LYSTDVLRHPFSITTFEDFVYWTDWDKTAVYRANKFNGKDVEAITSTHTLQNPMVIHVYH
PYRQPDGVNHCAAVNGHCSHLCLPAPRIAANSPRVSCACPNGLRLLPDNQMCVEDNTIKP
DEEVHKTSNGSNETVVIEEKPVTSVPEPPKTGTGISNSGQNPNLVVGIVVGVLIGVIVIG
AIIAAVVYKHYVHHNVTSMNFDNPVYRKTTEDQFALEKNGYAPGSKLYPSTVGEEAQQPL
NTPGTNDYV
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgttccttttggtgggctgtcgtctggcagccctcaaaattagtgccaaaatgtggtgg
tttttatttttgtgtgtactaaacataaaaacgcttggtgtgactgcatctaatagtgtt
ggagcagtatccaacagtggcgtttgtccgctaaagcaattccaatgtgcgaacgggaga
tgcatacccatatcgtgggtgtgcgagggagataacgattgcggcgacaactccgacgaa
aacatagaagaatgtaaagagacacgcacttgtacgtcgtcagaattccgatgcaagacg
gggaggtgtataccgctgtcatggcgatgcgacaacgagaaagattgtaccgatggatcc
gatgaagaaccaggaacttgcaaagtggaggcttgcggaccggaggagtttacgtgcaga
gggaaggccggagaatgtgtcccacttacatggatgtgcgacgacaatcccgattgctcc
gatggatcagacgagaaagcatgcaatgagacatgccggtccgacgagttcacatgcggc
aacggcaagtgtattcaaatgcgatgggtttgcgacggcgacgacgactgtggcgatgac
agcgacgagctgaagtgcccggcgcccacttgtcaaccgcagtcacatttctcttgcgcc
gatggacattgcatatccgcctggtggcattgcgatggtgatatcgactgtcctgatgga
agtgatgagacgggttgtgcaaccacgcccaaggtcaggtcaccttgcatatctacggag
tttgaatgccacgaccggatgacgtgcgtgcacaaagcttgggtgtgtgatggcgatcgg
gactgccccgacggtggtgacgaagctccagagctctgcagaggcaatgtcacctgccgc
ctcgaccagttccaatgcaaagaccatagttgtatacccggagcgctgtactgcaacgga
gttcgagattgtcctgacggcagcgatgagtttaattgcacgcgcacgaggactgtatgc
gataagaaaacggaatttgattgcggtgccggcatgtgcatccctctatccaaggtctgt
gacaagaaacctgactgtcccaactttgaggatgagcctagggatctatgtgacaaaaat
gaatgcgaaaaggataacggaggatgtactcaacgctgtgtcgacacgcctgtcggatac
tactgtgactgcgagaaaggatttaaacttgttgataatagaacttgtgaagacatagat
gaatgtgctgatcccggcgcgtgttcccaagtgtgcatcaatgagaaaggcacgttcaaa
tgcgaatgccacacggggtacgccagggaccctcgagacagaaccaggtgcaaggcgacg
gaaggtcacccctcactcctgttcgctaggcggttcgacattcgcaagatcagcttggat
caccacgaaatggtcgccattgtgaatgataccaaatctgctactgcgttagactacgtg
ttcagaaccggaatgatattttggagtgatgtgaccgatgaaaagatttataaggctcca
atagacgaaggcactcaacggactgttgtcatcggcgaacagttgataacatcagacggt
cttgcagtcgactggatctacaaccacttatactggaccgacactgggaagaatcacatc
gaactgtcagacttgcaggggaacatgaggaagatactgatcagggaccagttagaagaa
ccaagagctatagctctcaatcctattgatggatggatgtactggactgattggggtcag
gttccgaaaatcgagcgcgctggcatggacggatcacatcggcagaccattgtctcctac
gatgtcaaatggcctaatggtctaaccttggaccttgtcagaaaacgagtgtattgggtg
gatgccaaaatgaacacaatatcgtcgtgtaactacgacgggtccggccgtcgcctcatt
ctctactcaactgacgtcctccgccatcccttctccatcaccaccttcgaggacttcgtg
tactggacagactgggacaagacagctgtctaccgcgccaacaaattcaacgggaaggat
gttgaagctatcacttctactcacacacttcaaaatccgatggtgatccacgtgtaccac
ccttaccggcaacctgacggcgtgaaccactgcgctgctgtgaacggtcactgctcccac
ctctgcctacctgctccgaggatagcggccaactctccgcgggtgtcctgcgcctgccct
aatggactgcgactgcttccagacaatcagatgtgcgtcgaagacaatacaataaaacca
gatgaggaggtgcataaaacgagtaatggttcaaatgaaacggtagtaatagaggaaaaa
cctgtgactagtgttccagaaccaccgaaaactggaacaggaatctcaaacagcggccaa
aacccgaacctcgttgtcggcattgtcgtcggagtactcatcggtgtcatcgtaattgga
gcaattatcgcagcggtcgtgtacaaacattacgtgcaccataatgttacatcgatgaac
tttgacaaccccgtgtaccgtaagacgacagaggatcagtttgcgctcgagaagaatggc
tacgctccgggcagcaagttatatcccagcacggtgggagaagaggcccaacaacctctc
aacacacccggtacaaatgactatgtatag
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