Manduca sexta (tobacco hornworm): 115446883
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Entry
115446883 CDS
T07401
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex04620
Toll-like receptor signaling pathway
msex04624
Toll and Imd signaling pathway
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
115446883
04624 Toll and Imd signaling pathway
115446883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msex03000
]
115446883
Transcription factors [BR:
msex03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
115446883
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_5
Ank_4
Ank_3
HypD
Motif
Other DBs
NCBI-GeneID:
115446883
NCBI-ProteinID:
XP_037296693
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Position
20:complement(13008191..13032842)
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AA seq
1181 aa
AA seq
DB search
MSSCPSDYDPSESSKSPQSIWESGGYSSPSQQVPQLTSNLTELSVDHSYRYNGNGPYLQI
TEQPQKYFRFRYVSEMVGTHGCLLGKSYTTNKVKTHPTVELVNYTGRALIKCQLSQNKSE
DEHPHKLLDEQDRDMSHHVPEHGSYRVVFAGMGIIHTAKKEVAGWLYRKYIQQNKNEKFN
KKELEAHCERMSKEIDLNIVRLKFSAHDIDTGIEICRPVFSEPIYNLKCASTNDLKICRI
SRCYGRPRGGEDIFIFVEKVNKKNIQVRFFRLENGERTWSAMANFLLSDVHHQYAIAFRT
PPYVNHQISEDVQVFIELVRPSDGRTSAPMEFTYKAEQIYKQNKKRKTTSSYSSLDSSSG
SAGSIKSISELPAPVVFAENLPENNERIIDIPVQQNMLYQVLPSQCDLADAFMEVDSKGS
PASVVDPMWAGADGGLQMASSLPAIKLGSTELESLAHRGKDGVPIDKEFFDNYLSSLNSL
GELNDDDEINHMQYVRSLQMVHADSARRKAEPQPKDTVTKPTQSSPKDTDYGAQSARPTE
YSAYYKMEDGVEVKKLVKELCSIIQNKAGYKKQEVRNKLERLFTYRLSNGDTFLHMTLCS
NQSSFEYIVKIIHSVKMTHLLDYCNNKQQTILHMAIVNDLPRMVSLLIAKGCNPMNKDSE
GDNAVHYAVRSECCLEALLDAIKNNNVRCDLNDCNNEKQTALHLSTSGASARLLAARGAD
PRVRDAQGRTPLHLAAYDDNCDVVSALLEFVSPSEIDVVDGCGNTALQIVCGGSVKKNTL
EIVKLLLQKKADPLKQDGHNISAWKMAREHSEIRDAMKDYVPAAAYEEDTKSEMDDEFES
ADEEDYRMGSGSGAVSLPELGAYVEALSAALEAGGAWRALAHRLGLAAALDWCARQHAPA
RTLLLHLKVLTHYMYRHVEALSAALEALAHRLGLAAALDWCARQHAPARTLLLHLKVLTH
YMYRHVEALSAALEALAHRLGLAAALDWCARQHAPARTLLLHLKVLTHYMYRHVEALSAA
LEALAHRLGLAAALDWCARQHAPARTLLLHLKVLTHYMYRHVEALSAALEALAHRLGLAA
ALDWCARQHAPARTLLLHLKVLTHYMYRHVEALSAALEALAHRLGLAAALDWCARQHAPA
RTLLLHLKVLTHYMYRHVEALSAALEALAHRNGLAAALDWR
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcttgtccaagcgactatgatcccagtgaatcgtccaaatctccacaaagtatt
tgggagtcaggaggatacagttctccgtcgcaacaagttcctcaattgacttctaactta
acagaattgtctgttgatcacagctatagatacaatggaaatggaccatatctacagatc
acagagcaaccacagaaatactttcggttccgttatgttagcgagatggtgggaacacat
ggatgtttgcttggcaaatcctatacaacaaataaagttaaaactcatccgacagttgaa
ctcgtgaattacaccggtcgagccctgataaagtgccaactgtcgcaaaacaagagcgaa
gacgaacacccgcacaaactgctcgatgaacaagacagagacatgagccaccacgttccc
gagcacggcagttatagagtggtatttgctggtatgggtataattcatactgccaaaaag
gaagttgcagggtggctctatagaaaatatatacagcagaacaagaatgaaaagtttaat
aagaaagagctcgaagcgcattgtgagaggatgtccaaagagatcgatttaaatatagtt
agactgaagtttagcgctcacgatattgacactggcattgaaatttgccggccagtgttc
tctgaacccatttataatttgaagtgtgcgtctacgaatgatttgaaaatatgccgcata
agccgttgttacggtagaccgagaggcggcgaagatatcttcatatttgtcgaaaaggtc
aacaagaaaaacatccaagttcggttctttagactggaaaacggggagcgcacctggtca
gcgatggcgaactttctgctaagcgatgttcaccaccaatacgctatcgcttttagaacg
ccaccgtacgtcaatcaccaaatttctgaagacgtgcaagtttttatagaactcgtacgc
ccttcagacggtaggacgagcgctcccatggagttcacatacaaggctgagcaaatctat
aaacagaacaagaaacgtaaaactacttcgtcgtactcgtcgctcgacagctcctcaggt
tcggccggttcaattaaaagcatcagcgaactgcccgcgcccgttgtttttgctgaaaac
ttacctgaaaacaatgagcgtattatagatatacccgtacaacagaatatgctgtaccag
gttctgccaagtcaatgtgatttagccgacgcgttcatggaggtggacagcaagggaagt
ccggccagcgtcgtggacccgatgtgggccggcgccgacggcgggctgcagatggcgtcg
agcctgcccgccatcaaactcggctccaccgaactagagagcttggcgcaccgcggcaag
gacggagtgccaattgacaaagaattttttgacaattaccttagctcactgaactcactt
ggtgaacttaacgacgatgatgagatcaatcatatgcaatatgtgcgctcgttacagatg
gtccacgccgactcggcacgacgaaaggctgaaccgcaacccaaagacactgtaaccaaa
ccgacgcaatcttccccgaaggacacagactatggcgcccagtcggcacgccccactgaa
tattctgcttattataaaatggaagacggcgtggaagttaaaaaactggtgaaagaattg
tgtagtatcatacagaacaaagcgggatataaaaaacaagaagtgagaaacaaattggag
aggctgttcacctaccgtctgtccaacggagatacattccttcatatgacattgtgcagc
aatcaaagtagttttgaatacattgtcaaaatcatacatagcgtgaaaatgacacatcta
ttggactattgtaataataaacagcaaaccatattacacatggctattgtaaacgacctg
cctcggatggtctccttacttattgcaaaaggctgcaatccaatgaataaagacagtgaa
ggcgacaatgcggtgcactacgctgtgaggagcgaatgttgtttagaagcattattggac
gccataaaaaataacaatgttcggtgcgatttgaacgactgcaataacgagaagcagacg
gcgctgcacctgtcgacgagcggcgcgagcgcgcggctgctggcggcgcgcggcgccgac
ccgcgcgtgcgcgacgcgcagggccgcacgccgctgcacctcgccgcctacgacgacaac
tgcgacgtcgtcagcgcgctgctcgagttcgtgtcgccctcggaaatagacgttgtggac
ggctgtggaaacactgcgttacagatcgtctgcggcggctccgttaagaagaacactttg
gaaatagtaaaactgttgctccaaaaaaaggctgatccgttgaagcaagatgggcacaac
atatcggcgtggaagatggcgcgcgaacactccgaaatacgggacgcgatgaaggactac
gtccccgccgctgcgtacgaggaggacaccaagtcggaaatggacgatgagttcgaatcc
gctgatgaggaggactaccggatgggttccgggtcgggcgctgtgagtctgccggagctg
ggcgcgtacgtggaggcgctgagcgcggcgctggaggcgggcggcgcgtggcgcgcgctc
gcgcaccgcctcggcctcgccgccgcgctcgactggtgcgcgcgacagcacgcgcccgcg
cgcacgctgctgctgcacctcaaggtactcacgcactacatgtacagacacgtggaggcg
ctgagcgcggcgctggaggcgctcgcgcaccgcctcggcctcgccgccgcgctcgactgg
tgcgcgcgacagcacgcgcccgcgcgcacgctgctgctgcacctcaaggtactcacgcac
tacatgtacagacacgtggaggcgctgagcgcggcgctggaggcgctcgcgcaccgcctc
ggcctcgccgccgcgctcgactggtgcgcgcgacagcacgcgcccgcgcgcacgctgctg
ctgcacctcaaggtactcacgcactacatgtacagacacgtggaggcgctgagcgcggcg
ctggaggcgctcgcgcaccgcctcggcctcgccgccgcgctcgactggtgcgcgcgacag
cacgcgcccgcgcgcacgctgctgctgcacctcaaggtactcacgcactacatgtacaga
cacgtggaggcgctgagcgcggcgctggaggcgctcgcgcaccgcctcggcctcgccgcc
gcgctcgactggtgcgcgcgacagcacgcgcccgcgcgcacgctgctgctgcacctcaag
gtactcacgcactacatgtacagacacgtggaggcgctgagcgcggcgctggaggcgctc
gcgcaccgcctcggcctcgccgccgcgctcgactggtgcgcgcgacagcacgcgcccgcg
cgcacgctgctgctgcacctcaaggtactcacgcactacatgtacagacacgtggaggcg
ctgagcgcggcgctggaggcgctcgcgcaccgcaacggcctcgccgccgcgctcgactgg
cgctga
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integrated database retrieval system
