Manduca sexta (tobacco hornworm): 115446988
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Entry
115446988 CDS
T07401
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115446988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msex03019
]
115446988
Messenger RNA biogenesis [BR:
msex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
115446988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
HBS1_N
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
DO-GTPase2
AAA_22
Motif
Other DBs
NCBI-GeneID:
115446988
NCBI-ProteinID:
XP_030029706
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Position
28:11237140..11239501
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AA seq
675 aa
AA seq
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MARHRNVRNRHYSDEYYDEDLYGNSVEEDSCLSPSDTAQWMYDRSRNQQAISHFLDSAND
IQEESEDEHPNISQPALERRESTDIRSLNLDEENEAKLMSCLDALRDILGDTISENILIQ
SVLKHNFDYDKALDEILNNNKSKQHGVPKVEPAKPTLTIDPLKPAAVISVPKVIATNLEP
KSMAIVKGFKIGLSEDSGSRPQTPRDQSPCTERAAIKTEQIEEVKTPKVKENKVDPNKQY
NQERGSDKDHLYIVVIGHVDAGKSTLMGRLLCDLGEVSQKTLHKYEQESKKIGKQSFMYA
WVLDETGEERVRGITMDVGRAQFETKTKHVIILDAPGHADFIPNMITGAGQADVALLVID
ATRGEFESGFDLGGQTREHALLVRSLGVSQLAVAVNKLDTSNWSQERFNEITKKLKSFLK
QAGFKDSDVTYVPCSGLTGENLIKPPNEPELLQWYNGPCLLDVIDNFNVPERPVSKPLRM
SVNDVFKGTGSGFCVSGRIENGMLSKGDKVLICPTKEMAEVRSISLNDLSSNVGFAGDQV
VATISGVEMQNVSVGCVLSDPIQQVPVTSRFEARIVVFNVKVPITKGFPVLIHHQSLVES
ANIVKLKALLNKSTGELIKKKPRCLGNNSVAVVEIEVCRPICVERYKDVKELGRVMLRVA
GVTIAAGLVTDIVTT
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtcatagaaacgtgaggaacagacattactcggatgaatattacgatgaagat
ctttatggaaattctgtagaggaggacagctgtttgtcaccgagtgatacagcgcagtgg
atgtacgataggtctcgaaaccagcaagcaatatctcatttcttagatagtgccaatgat
atccaagaggaatcagaggatgaacacccgaatatttcacagccggcactggaaagacgg
gagtccactgacattcgcagtctcaatttagatgaagaaaatgaggcgaagcttatgtct
tgtttagatgcactacgagatatactaggtgatacgatttcagagaatatactcatacaa
tctgtattaaaacataattttgattatgacaaagctcttgatgaaatattaaataacaac
aagagtaaacaacatggcgtcccaaaagtggagccagcgaaacctacactcactattgat
cctttaaaaccagcagctgtgatttcagttccaaaagtaattgccactaatcttgagccc
aaaagtatggcaattgttaaaggatttaaaattgggcttagtgaagattctggaagtagg
cctcagactccaagagatcagtcaccatgtacagaaagagcagctatcaagactgaacaa
atagaagaagttaaaacgccaaaagttaaagagaataaggttgatcccaataaacagtac
aaccaagaaagaggctccgataaagatcacttgtatattgttgttattggtcatgtagat
gctggaaagtctactctaatgggaaggttattatgtgaccttggggaagttagccagaaa
acgttgcacaaatatgaacaagagagcaagaagattggcaaacagagctttatgtatgca
tgggtcttagatgaaactggggaggaaagggtcagaggcatcacaatggatgttggtaga
gcacaatttgaaacaaaaactaaacatgttatcattttagatgcaccaggacatgcagat
tttataccaaacatgataactggtgcaggacaggctgatgttgctttgttagtaatagat
gcaacaagaggagagtttgagtcaggttttgatttgggaggtcagactcgggaacatgct
ctgcttgtccgatcacttggggtaagtcagctggcagtggctgtcaacaagttagataca
agtaattggtctcaagaaaggttcaatgagattactaaaaaattaaaatcattcttgaaa
caagctgggttcaaagactcggatgtgacctatgtgccatgttccggactcactggagaa
aatttaattaaacctccaaatgaaccagagttattgcaatggtacaatgggccttgtctt
ttagatgttattgataatttcaatgtgccagagcgaccagtctctaaacctttgcgaatg
tccgtaaatgatgtgtttaagggcactgggtcaggtttttgtgtatctggacgcatagag
aatggtatgttaagtaaaggcgataaagttctaatttgtccaactaaagaaatggctgag
gtccgaagtataagtcttaatgatttgtccagtaatgttggatttgctggagaccaagtt
gttgcaactatatctggtgtagaaatgcaaaatgtttctgtgggttgtgtgttaagtgac
cccatacaacaagttccagtaacatcacggtttgaagctcgaattgtcgtgtttaacgtt
aaagtaccaatcacaaaaggatttcctgttctcattcatcatcagtctttagtagagtca
gcaaatatcgtcaaattgaaggctttattaaataagagtactggcgaattgataaagaag
aaacctcgttgcctaggcaacaattcggttgcggtagttgagatagaagtgtgcagaccg
atctgtgtggagcgatacaaagacgtgaaggaactggggcgtgtcatgttacgtgtggcc
ggcgtcactatagctgcggggctcgtcactgacattgttacaacttga
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