Manduca sexta (tobacco hornworm): 115447172
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Entry
115447172 CDS
T07401
Name
(RefSeq) E3 ubiquitin-protein ligase UBR1 isoform X1
Organism
msex
Manduca sexta (tobacco hornworm)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRT6_C
ARM_UBR_1_2_3
WHD_UBR1
zf-UBR
ClpS
zf-UBR_1
Replitron_HUH
ELL
Motif
Other DBs
NCBI-GeneID:
115447172
NCBI-ProteinID:
XP_037303444
LinkDB
All DBs
Position
7:6542281..6587206
Genome browser
AA seq
1784 aa
AA seq
DB search
MFISDFLTLFCCDRENKEAGTSQGGHALPLESFKFTLPARADAVVELWRSKMADGVLSPA
HFQDHWRVTVPRIYSPQPNRTCLDWSFDEELATKLLIQPLEQFIWGTTEGSQPAPPRRST
LCGRVFKQGEPAYSCRECGMDNTCVLCVECFKVSAHRHHKYKMGQSGGGGCCDCGDTEAW
KRDPFCELHAASKDGEAEASVSPDVVERMKIVATVCLTYCLRLLTHDHAPNLPNDLRLKD
GEKDLVLQILEQPDCFCTVLYNDETHTFEQVITTLIRVTKCNHRDSVELVSLIDREGRAL
IKCHTFQVCDKLKTDIEICTAMFERFTTRQGSALKVLVMHAHVIAHQTFAMKLLHWLQNF
VSQEPQLRLAVSQVALGEECWGSATAVGGGGVAVGVMQNDFRMWKAARTAWHRLLIATTL
MDYTTKRTMAILFTKNYGSILKDFIRDDHDHSFSISSLSVQLYTTPTLAHHLIAKQDALF
VVLNTFVSECNRRCTNGRLEFDRNHVSIPFKRAQFILYDVKYLLGSVPATFDDDLRKGFV
HGLSLMLNLLVMMQGMDSVVRQMGQHMEYEPEWESAFNLHVKLAHSITLSLEWCAAEKQL
AVAAYRMALRRHAETYTPPAKVLRELGGQSALVIPYDVSVKAVSIHRPLSRYIAGLHLLL
HRHGLSYHSREFDRQDKPKPTPEELIEPVLQTMAMIAQVHAGMWRRNGFALLNQLFFYHN
VKCRTEMLDRDVVMLQIGASLIESNEFIIHVLNKFNLLGWASADFEQREVEDDTLRHTIS
MVEEFLGLLITIVGSRYVPGVGEVTNEDRTKKEIIQMLCVKPMPHSELNRSLPEDQLHET
GLEAVIHEVADFIKPTGGNNRGVYKLKPHLYDEYDTFFYHYTREELSRSEEEQRNRRKAA
GLGECCPPPALPLLSAPFRLVAHLLQSDAALHVLRTVLQRARDLRARSFSETQVHKALHL
MGYAVRDEESGHYEFLAFAESAARAGLVTLLQQLIASPRVDAHRPLAKWVLHRIKNLLGQ
GDEHVGDGENMEVDQEEKPATDEAAEAEKTRRAKFAAERRAKLMAQMKTQMNNFISNNAT
LFEETNTEVTAEEQDIRPLYCGAALGVWGGGVPEPVRTCIMCQEEARVEAMGDPLVLVAF
VQQSRVLDRRRGAGAAPPGAGSCATLAPGLGAQPHVSSCGHALHARCWRKYVDNVQDKEN
RRPYRMRQPAAFDVEKKEYLCPLCERLCNTALPLLPGPNIPSGTPPPLNEEMYSDSVNMI
LKLKHQVCAASVHVCTEICEDMHCQARARSVGAMSSDMEEESADETEVYVSTHSENLLSP
EFLAHFEGEIPNYNVNTKLLIQEFADVLPVSESGDMAASAALYRATAYTIISTNVLLQAE
NRPLLVEVPSRLRDALQALIRLTAVVPSIWSSPKHLAHHALSSLNTLESTSPLTHDVFGT
MVALVLTAPSMFCKQGSTARPTHLARQITLQALRADLFRALLVTDVSSCAEPMEGQETFN
AKPDLENLLSIMKEIRRGNLPDGLNPNDVWDKIKKQCHPFLRCCCIFYHFLSDINPPTEL
TVPEGDTWEVMCGYLDLPTTFKDLIDNQTAKKKFNEWGAQSNDWFTGDILPETVVSPSEP
PRLISLPEDFSELMNLVSDYPCPNSDREDSKNPTVCLVCGQIMCSQSYCCQAEIPKAGRS
GGSERVGAVVAHAAVCGGGVGMFLRVRSCELLLVAAPARGAKLPAPYLDSYGETDQGLNR
GNPLHLCPERYESLRTLWLSHSLHERIARALDTNMLATITWQNF
NT seq
5355 nt
NT seq
+upstream
nt +downstream
nt
atgtttataagcgattttctgacgctgttctgttgcgaccgcgagaacaaggaggctggg
acttcgcagggtggtcatgcgctgcccttggaaagttttaagttcacgttgccagcgcgg
gctgacgcggtggtggagctgtggcggtccaagatggcggatggggtgctctcgccggcg
cacttccaggaccactggcgcgtcaccgtgcccaggatatactcgccgcagccgaacagg
acttgcctagactggtcgttcgacgaggagctggcgacgaagctactgattcagccattg
gagcagttcatatggggcaccacggagggttcgcagcccgcgccgccgcgccgctccacg
ctctgcggccgcgtcttcaagcagggcgagccggcgtacagctgcagggaatgtggtatg
gacaacacgtgcgtgctgtgcgtggaatgcttcaaggtgtccgcgcatcggcaccacaag
tacaagatgggccagtccggcggcggcggctgttgcgactgcggcgacaccgaggcgtgg
aagcgcgatccgttctgcgaactgcacgctgcgtcaaaagacggcgaggcggaggcgagc
gtgagccctgacgtggtggagcgcatgaagatcgtggccacggtgtgcctcacgtactgc
ctcaggctgctgacccacgaccacgcgcccaacctgcccaacgatctcagactgaaagac
ggcgagaaggacctggtcctgcagatcctggagcagccggactgtttctgcacagtgctg
tacaacgacgaaacgcacacctttgaacaggtgataacaacgttaatacgcgtgacgaaa
tgcaaccaccgcgactccgtggagctggtcagcctcatcgaccgcgaggggcgcgcgctc
atcaagtgccacaccttccaggtctgcgacaagctcaagacggacatcgagatctgcacg
gcgatgttcgaaaggttcacgacgcgccagggctccgcgctcaaagtgctcgtcatgcac
gcgcacgtcatcgcgcaccagaccttcgccatgaagctgctgcactggctccagaatttc
gtaagtcaagagccgcagctgcgcctcgcggtgagccaggtggcgctgggcgaggagtgc
tggggctcggccacggcggtgggcggtggcggcgtggccgtgggcgtcatgcagaacgac
ttccgcatgtggaaggcggccaggaccgcctggcaccgcctgctcatagccaccacactc
atggactacaccaccaagcggaccatggctatactcttcaccaagaactatggttcgatt
ctcaaagacttcatccgtgacgaccacgaccattcgttctccatatcgtcgctctcagtc
cagttgtacactacaccgactcttgcgcatcatctcatcgccaaacaggacgcgttgttc
gtcgtacttaacaccttcgtcagcgagtgcaatcgacggtgcactaatggtcgtctagaa
ttcgatcgcaaccacgtctcaataccgttcaagcgagctcagttcatcctgtatgacgtg
aagtatcttctgggatcggtgccggcgacgttcgacgacgacctgcgcaagggcttcgtg
cacgggctgtcgctcatgctcaacctgcttgtgatgatgcagggcatggactcagtggtg
aggcagatgggccagcacatggagtacgagccggagtgggagagcgcgttcaacctgcac
gtgaagctcgcgcacagcatcacgctgtcgctcgagtggtgcgcggcagagaagcagctc
gccgtcgccgcctaccgcatggcgctgcgcaggcacgccgagacttacacgccgcccgct
aaagtgctcagagagttgggcggacagagtgcgctggtgatcccatatgacgtgtccgtt
aaggcggtgtccatccaccggccgctgtcgcgctacatcgccggcttgcacttactgctg
caccgccacgggctgtcgtatcacagccgcgagttcgacaggcaggacaagccgaagccg
acgcctgaggagcttatagagccggtgctgcagacgatggcgatgatcgcgcaggtgcac
gcgggcatgtggcgccgcaacgggttcgcgctcctcaaccagctgttcttctaccacaac
gtcaagtgccgcacagagatgctcgaccgagacgtcgttatgctgcagatcggcgcatcc
ctaatcgagagcaacgagttcataatccacgtgctgaacaagtttaatctcctgggctgg
gcgtcggcggacttcgagcagcgcgaggtggaggacgacacgctgcggcacaccatcagc
atggtcgaggagttcctcggactgctcatcactattgtcgggtcgcggtacgtgcccggc
gtgggcgaggtcaccaacgaggacaggaccaagaaggagatcatacagatgctctgcgtc
aagccgatgccgcactcggaactcaacagatccttaccggaagaccagctccacgagaca
ggtctggaagcggtgatccacgaggtggcggatttcataaagcccacggggggcaacaac
cgcggcgtgtacaagctgaagccacacctgtacgacgaatacgatacgttcttctaccac
tacacgcgcgaggagctgtccaggagcgaggaggaacagaggaacaggaggaaggctgct
ggtctgggcgagtgctgcccgccgccggcgctgccgctgctgagcgcgcccttccgcctc
gtggcgcacctgctgcagagcgacgccgcgctgcacgtgctgcgcaccgtgctgcagcgc
gcccgggacctgcgcgccaggtccttctccgagacgcaggtgcacaaggcgctgcacctg
atgggctacgcggtccgcgacgaggagagcgggcactacgagttcctggccttcgcggag
agcgccgcccgtgccggcctggtcaccctactgcagcagctcatcgccagccccagggtc
gacgcgcaccgacccctcgccaaatgggtgctgcaccggatcaaaaatctgttgggtcaa
ggcgacgagcacgtcggcgatggagagaacatggaggtagaccaggaggagaagcctgcc
actgatgaggcagcagaagctgagaaaactcgtcgcgcgaagtttgcagcagagcgtcgt
gccaaactgatggcgcagatgaaaacacaaatgaacaatttcatttcaaacaacgcgact
ctcttcgaggagactaatactgaggtgacggcggaggagcaagacatccgcccgctgtac
tgcggcgcggcgctgggcgtgtggggcggcggcgtgcccgagcccgtgcgcacctgcatc
atgtgtcaggaggaggctcgcgtggaggcgatgggcgacccgctagtgctggtggcgttc
gtgcagcagtcgcgcgtgctggaccgcaggcgcggcgcgggcgcggcgccgcccggcgcg
ggctcgtgcgccacgctcgcgcccggcctcggcgcgcagccgcacgtgtcctcctgcggg
cacgcgctgcacgcgcgctgctggcgcaagtacgtcgacaacgtgcaggacaaggagaac
cgcagaccttaccgcatgcgccagccagcagctttcgacgtcgaaaagaaggaataccta
tgccccctctgcgagcgactgtgtaacaccgcgctcccactcctgccgggtcccaatatc
cccagcggcacgccaccacccctcaatgaggaaatgtacagtgactcagtaaacatgatc
ctcaagctgaagcaccaagtgtgcgctgcgtcggttcatgtgtgcacggagatctgcgag
gacatgcactgccaggcccgcgcgaggagtgtcggcgccatgtcttcggatatggaggag
gaatccgctgacgagacggaggtgtatgtgtccacacactcggagaacctgctgtcgcca
gagttcctggcgcattttgagggcgagataccgaactacaatgtcaacactaagctactc
attcaggagtttgctgatgtcctgccggtatcagagagcggtgatatggcagccagcgcc
gcgctgtatcgcgccacagcatatactatcatcagcacaaacgtgctgctccaggcagag
aacaggccgctcctggtagaggtgccgtccagactccgtgacgctctccaggcgctgatc
aggctcaccgctgtcgtaccctccatctggtcctcaccgaaacacttggcgcaccacgct
ctcagcagcctcaacaccctggagagcacctcgccactcacccacgatgtgttcggcacc
atggttgccctggttctcactgctccgtccatgttttgcaagcaaggcagcaccgccagg
ccgacgcacctggcgcgccagataacgctgcaagcactgcgggcggatctattccgcgcg
ctcctagtcactgatgtgtcatcctgcgctgaacccatggaaggccaggagactttcaac
gcgaagccagacctggagaatctgctatcgataatgaaagaaatacgacgaggaaacctg
ccagacggacttaatcctaatgacgtatgggacaagatcaagaaacagtgccatcccttc
ttgaggtgttgctgcatattttatcattttctgagcgacatcaacccgcccacagaactg
acagtgccagaaggtgacacctgggaggtgatgtgtggctacttagatctgccgactaca
ttcaaggacttgatagacaatcaaactgccaaaaagaagtttaacgaatggggagcgcaa
tcgaatgattggtttacgggagatatacttccagaaacagttgtgtctcctagcgaaccg
ccgcgactgatctccttgccagaagacttctcggagttgatgaatcttgtgtctgactat
ccatgtccaaattcagaccgtgaagatagcaagaaccccacggtgtgtctcgtgtgtggc
cagataatgtgctcgcaaagttattgttgtcaggcggagatacccaaggcgggtcgcagc
ggcggcagcgagcgcgtgggcgcggtagtggcgcacgcggcggtgtgcggcggcggcgtg
gggatgttcctgcgtgtgcgcagctgcgagctgttgctggtcgcggctcctgcgcgtggc
gctaaactccccgcgccatacctcgactcctacggcgaaactgatcagggtctgaaccgc
ggcaacccgctgcacctgtgccccgagcggtacgagtcgctgcgcacgctgtggctgagc
cactcgctgcacgagcgcatcgcccgcgccctcgacaccaacatgctcgccaccatcacc
tggcagaatttctga
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integrated database retrieval system
