Manduca sexta (tobacco hornworm): 115447470
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Entry
115447470 CDS
T07401
Name
(RefSeq) Fanconi anemia group J protein homolog isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03440
Homologous recombination
msex03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115447470
03460 Fanconi anemia pathway
115447470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msex03400
]
115447470
Enzymes [BR:
msex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
115447470
DNA repair and recombination proteins [BR:
msex03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
115447470
FA (Fanconi anemia) pathway
Downstream FA components
115447470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
HBB
Motif
Other DBs
NCBI-GeneID:
115447470
NCBI-ProteinID:
XP_037292847
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All DBs
Position
9:complement(5000461..5025488)
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AA seq
916 aa
AA seq
DB search
MNSPIEISDDDDSMDPEDQTNPISIDVVISDDDDGNSPCNDEDNLPPTLSQENKKTSALK
KLFSKSNNGPSVSKIREEKPRPPGINKMIGGINVNLPVNPYGCQVAVMSKVITGIKNSQN
CLLESPTGSGKTLALLCAALAWVKNECGYLEAITPKPVEDSRIDMDDIKKRPRYILKSEP
SFNTPEFGEKSIYDKPGEKGDWDLLNYGDKRDKPLQDSFEDENNEVKIHKKQRMNTSGES
TSSSPLKLESNDETSPPKRVLFAQIDNLRMKSVHYCSLPTIYYGARTHKQIAQVIKEFER
TSYCGEVPMSLLSSRDQSCIREFDKALWKSKNDMCRGCTKVVGKKEKQKVDEPTCIYYDN
RKALNHETMPPAFDIEDLVRAGEEKTACPYYAARLMAQQAHIIFCPYNYLIDRGIRSSLN
INLTGEIVIIDEAHNIEDVCRDAGTFTITQLQVQDALDHLQKITTYRFEKSNGIENIESL
IRTLKNWEDWFINNRRMVESLTSHKPGEPFAFNTDSFVKSLANHNLGFAQYPEFRHNSTQ
FCRRVREEPDAFVFVKQDTTSLLETIDSALDYLFRSDCKYINDYKPIFEIETTYHKDYTV
KTGSLRLLCLSPAVVFGSLAAARCVVLASGTLAPTDSFASELGAHFPLCISPNHIIPRNR
VWVGTLGRTLSGNELTCTARTLGQVDVLDSIGAAVRRVCRVVPHGVLCFLSSYSLMHQLI
ARWKLTNLWSEIKSLKHVFKESKDAKTHHEIMEDYYKYCSGTKGALLFAVYRGKVSEGMD
FADEQARAVIAVGVPFPNFGEQAVVAKRDYNNKYKKERNLLSGDEWYITQAYRALNQAVG
RCVRHRADWGAVLLLDRRLQLHAHLRYLPKWLRNFLDNNHHDSLDSLFESSQGLERFIQQ
MTLQDQDDLNRSLSQE
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaccaatcgaaatatctgatgatgacgatagtatggaccctgaagatcagaca
aatcctatctccattgatgtagtaattagtgacgacgacgacggaaactctccttgcaat
gacgaagataacttgcctccgactctaagtcaagaaaataaaaagacgtctgcacttaaa
aagttattttcaaaatctaataatggaccgtcagttagtaagatcagggaagagaaacct
cgtccaccaggcatcaataaaatgataggcggaattaatgttaacttaccagttaaccct
tatgggtgtcaggtggctgttatgtccaaggtgataacaggaataaagaacagccaaaat
tgtttactggaaagtccaactggatctggaaaaacactggcattgttgtgtgcagcacta
gcttgggtgaagaatgaatgtggctatctggaagctattacaccgaagccagttgaagat
tctagaatagacatggatgacatcaagaaacggcctagatatattctcaaatcagagcca
agcttcaacacaccagaatttggtgagaaaagcatatacgacaagccaggggagaaaggt
gactgggatctactaaactacggcgataaaagagataaaccgctgcaggacagcttcgaa
gatgaaaataatgaggtgaaaattcataaaaagcaacgaatgaacacttcgggcgaatca
acctcaagttcaccgctaaagcttgagtcaaatgacgagacctctccgccgaaacgagta
ctcttcgctcaaatcgacaatcttcgcatgaagtccgttcattattgcagcttgccgact
atatattacggcgcgcgcactcacaaacaaatagcgcaggtgatcaaagagtttgagcga
acgtcgtactgcggcgaggtgccgatgtccctactctccagcagggaccaaagctgtata
cgagagttcgacaaggcactgtggaagtccaagaatgatatgtgcagggggtgtactaag
gtggtaggtaaaaaggagaagcagaaagtagacgagcctacttgcatatactacgacaat
agaaaggcactgaatcacgaaaccatgccgcccgcgttcgacatcgaggatctggtgaga
gctggcgaggagaagacggcgtgtccgtactacgcggccagacttatggcgcagcaggct
cacatcatcttctgcccctacaactatctgatcgaccgcggcatcaggagtagcttgaac
atcaacttgacaggagagatagtgataatagacgaagctcacaacatagaggacgtttgt
agagatgcgggcacgttcactataacacagctacaagtgcaggacgctttggatcatcta
caaaaaataacaacgtatcgttttgaaaagtccaatggtattgaaaacatcgaaagttta
atacgaacactgaaaaattgggaagactggtttataaacaaccggcgcatggtggagtcg
ctgacgtcacacaagccgggcgagccgttcgcgttcaacacggactccttcgtcaaaagc
ctcgccaaccacaaccttggcttcgcgcagtaccctgaattcagacacaactcgacgcag
ttctgccggagggttcgtgaagagcccgacgctttcgtgttcgtgaagcaggacacgact
tcgctgctggaaactatcgactctgcactcgactatctgttccgctcggattgcaaatac
ataaacgactacaaaccaatattcgagatcgagaccacctaccataaggactacaccgta
aagaccggcagcctccgcctgctgtgcctgtcgccggcggtggtgttcggctcgctggcg
gcggcgcgctgcgtggtgctggcctcgggcacgctcgcgcccaccgacagcttcgcctcc
gagctcggcgcacacttcccgctctgcatcagccccaaccacatcatacccaggaacagg
gtgtgggtgggcacgctgggcaggacgctgagcggcaacgagctgacctgcaccgccagg
accctgggccaggtggacgtgctggactccatcggcgcggcggtgcggcgagtgtgtcgc
gtggtgccgcacggggtgctctgcttcctcagctcctactcactcatgcaccagctcatc
gccagatggaaattgactaatttatggagcgaaataaaaagtttgaaacacgtcttcaaa
gaaagtaaagacgcgaaaacacatcacgagataatggaggattattacaagtactgttcg
ggcacgaaaggcgcgctgttgttcgccgtgtaccgcggcaaggtctccgaaggcatggac
ttcgccgacgagcaggcccgcgccgtcatcgcagtaggcgtaccgttcccgaactttggc
gagcaggcagtagttgccaaaagggattacaataacaaatataaaaaggagaggaacttg
ctctctggcgatgagtggtacataactcaagcgtacagagcgctgaaccaggcggtgggt
cggtgcgtgcggcaccgcgcggactggggcgccgtgctgctgctcgaccgcagactgcag
ctgcacgcacatctgcggtacctgcccaagtggctgcggaactttttggataacaaccac
cacgactcactcgactctctgttcgagagttctcaaggtctagagcgtttcatccagcag
atgaccttgcaggatcaagacgatctcaaccgatcactcagtcaagaataa
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