Manduca sexta (tobacco hornworm): 115448145
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Entry
115448145 CDS
T07401
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex04145
Phagosome
msex04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115448145
09142 Cell motility
04814 Motor proteins
115448145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msex03036
]
115448145
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
msex04812
]
115448145
Chromosome and associated proteins [BR:
msex03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
115448145
Cytoskeleton proteins [BR:
msex04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
115448145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Dynein_IC2
WD40_CDC20-Fz
WD40
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_HPS5
Beta-prop_EIPR1
WD40_RFWD3
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_SPT8
Glyco_transf_5
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
115448145
NCBI-ProteinID:
XP_030031320
LinkDB
All DBs
Position
20:8864029..8881963
Genome browser
AA seq
689 aa
AA seq
DB search
MSSMSDRKAELERKKAKLQALREEKDRRRREKEQKDAEEALQRASAASSLDSRRDLDEML
SSLGVAPVKDVLSSLSSMTSLTPPQTSSPDASLPHTDKSSLPASGGPKKPTQLQVVSVQS
TDIPPKENVTYAKQTQTTASGVSELRDGYMEDWWRPRKAHATDYYDEYNLNPGLEWEDEF
TVLTFDGDVARQGDEEDAAFHGKLPPGILPHGLPTVKEVQPAVTAAPPEKKDDEKEKKVR
ELSADEKQTILLSSEFQRFMSRAGRVIERALAESVDIYTDYTGGGDGENALDDKSDARLS
LVRTFYDERWSRGRCVTCLDWSTAHPELMLASYHNSDDAPHDPDGVCLVWNTKFKKNTPE
DIFHCQSPVMSATFARFHPNLILGGTYSGQIVLWDNRVQKRTPIKRTPLSSLAHTHPVYC
LSVVGSQNAHNLISVSTDGRLCSWSLDMLSQPQETLDLQHRQSKAVAVTSMGFPHGLVNN
FVLGSEDGNVYTGCLYGQRAGVTECVEAHAGPVTGVSCHAAAGAVDLAHLYLTCSMDWSV
KLWSLKENKPLYSFEDNGDYVVDVRWSPTHPALFAAADAAGKLDLWNLNRDTEVPVASIQ
AEGGVAFNRVSWTPSGSHVTAGDDHGKIWVYELAEHVAQPRHDEWSKFVYTLQELRNNQA
DEESERVSLAASGPSSLTSLTSLASNPLR
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcatgtcagaccgcaaggctgagctggagaggaagaaggcaaagctccaggcc
ctcagggaggagaaggatcgccgccgcagggagaaggaacagaaggatgcagaagaagca
cttcaaagggcatcagccgcgtcgagcctggacagccgcagggacttggacgagatgctg
tcatccctcggagtggcaccagttaaggatgtcctgtcgtctctatcatccatgacatct
ctaacaccaccacagacatcctcgccggacgccagcctcccgcacacggataaatcaagc
ttaccggcgagtggcggtccaaagaaaccaacgcagcttcaagtggtgtccgtgcagtcg
accgacattccaccgaaggagaacgtcacgtacgccaagcagactcagaccactgcctct
ggtgtgagcgagttgcgtgatggatacatggaggactggtggcggccgcgaaaagcacac
gcaaccgactactacgacgagtacaatctaaacccgggtttagagtgggaggacgagttc
acagtgcttacattcgacggcgacgtggcgcggcaaggcgatgaggaggacgctgcgttc
cacggcaaactgccgccgggcatactgccgcacggcctgcccaccgtcaaggaggtgcag
ccggcggtcaccgccgcgccgccggagaagaaggatgacgagaaggagaagaaagtccgc
gagctgagcgcggacgagaagcagacgatcctgctgtcgtcggagttccagcggttcatg
agccgcgccggccgcgtcatcgagcgcgcgctcgccgagtccgtcgacatctacaccgac
tacaccggcggcggcgacggcgagaacgcgctggacgacaagtcggacgcgcgtttgtcg
ttggtgcgcacgttctacgacgagcgctggtctcgcggccgctgcgtcacgtgcctggac
tggtccaccgcccatccggagctgatgctggcctcctaccacaacagtgatgatgcccct
cacgacccggacggcgtgtgcctcgtctggaacaccaagttcaagaagaacacgcctgag
gatatcttccattgtcagtcgccggttatgagcgccacgtttgccaggttccacccgaac
ttgatcctgggtggcacatactctggccaaatcgtgctgtgggacaatcgcgtgcagaaa
cggacccccatcaaacgcacaccgctctcttcactcgcacacacgcatccagtttactgc
ctgtcggtagtgggcagtcagaacgcgcataacctaatctcggtatcaacggatggtcga
ctctgctcgtggtcactggacatgctgtcacaaccgcaggagacgttggacctacagcat
cggcagagcaaggcagtggccgtcaccagcatgggattcccacatggactggttaataac
tttgtgctgggcagcgaggacgggaatgtttataccggatgcctgtacggacagcgcgca
ggcgtgacggagtgcgtggaggcgcacgcggggccggtgacgggcgtgtcgtgccacgcc
gccgccggcgccgtcgacctcgcgcatctctacctcacctgctccatggactggagcgtc
aagctctggagcctcaaggagaacaagccgctgtactcgttcgaggacaacggcgactac
gtggtggacgtgcgctggtcccccactcacccggcactgttcgcggccgccgacgccgcg
ggaaagcttgatctgtggaacttgaacagagatactgaggtaccagtggcgtcgatccag
gcggagggaggcgtggcgttcaaccgcgtgtcgtggacgccgtccggctcccacgtcacc
gccggcgacgaccacggcaagatatgggtctacgaactcgccgagcatgtggcccaaccg
cgccacgacgaatggagcaagttcgtgtacacactccaagagctgcgcaacaaccaggcc
gacgaagagagcgagcgcgtcagcctcgcggccagcggaccctcctccctcaccagcctc
acgtcgctcgcctccaacccgctcaggtaa
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integrated database retrieval system
