Manduca sexta (tobacco hornworm): 115448184
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Entry
115448184 CDS
T07401
Name
(RefSeq) LOW QUALITY PROTEIN: nipped-B-like protein
KO
K06672
cohesin loading factor subunit SCC2
Organism
msex
Manduca sexta (tobacco hornworm)
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msex03036
]
115448184
Chromosome and associated proteins [BR:
msex03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
115448184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
Cob_adeno_trans
Motif
Other DBs
NCBI-GeneID:
115448184
NCBI-ProteinID:
XP_037295427
LinkDB
All DBs
Position
17:complement(7350319..7369177)
Genome browser
AA seq
2034 aa
AA seq
DB search
MNERDIPSVPITTLAGVASLTDLLPVLPLPTPLPSTLNNKSQLFHPLVAEEAAKLLATRD
KDLVSQLLDSLMQTSVRNIDLKDDSIPNAVSPPPQQQPTPELLKAILSINPNXFDQQQQN
HWGNNLHSSKFNGMSPSXSYNYTSHNAVPSSPSTHGTPIHSATIPNQQLLAPPCQSSPHV
NMGSPPSQARPGSQVNITAQNNISPIWNSANSSNIYTSPLSNTSCSTPQNGGFYNSLVQD
TQNFATSISEDKDPLSMSPRNQCDQQRLHLQSQDKAFEQDGNVVTGQSPAQASVAPSPLR
QEPQVPQPSMGAPYAPPLSHSTHEKQDLHKPVNTNSKYPVVKLGRLSEGLLKKHEFSHED
RPRKNSTLESDSDDNMPLKAKPSNFTPNVDKEREAIDIAREKNWEAVKRKHEEASKKVEA
EAAIVRPKLRKVERRLVPVLEMLSVDELMETNTYQRFNKLIESVFEAIDDDILITDEMEG
TDIPEELLLPRYQLQELSAEAAKLKNLGAMEAIPSDRLVRLLNILEKNIRAAEKMSLVGD
PEDSEEMRQIWIESALERVMCASDACLTSLYIMTSPSMPKRIFLEDVIDRIIMFIKFQLN
NTIYCVYDPVYSIQTTSKKKVDGRKRRGGGSTHATRRCGGSTRAVKELYTHAHESVALLA
ELFAAHHLTDTTVLHASTVGVSPFFVENVSELQLAALKLVTTIFTKYEQHRRLLLEDILA
SIARIPSSKHNLRSFQLSTDQHIQMLTALVLQLVQCVVTLPETLCKSQDKDKEHADTSES
KKHIDKDLMIISKYEAAISVGGTFLTSFLNKCRSRSEEVDFRPLFENFVHDLLTTVNKPE
WPATELLLSLLGTMLVKYMSDKSMEMSVRVASLEYLGLVAARLRRDSVHSRAKLATMDHV
IRDIRAEEEKDGNQAQGVTFGLDEDEERTEFLQRVLLDYLAINGQKDQAWNCARHFYITQ
WYRDMVVQPKSSSPTKRPKNKTKKRHKDDSTDEESEIDEDSDGGIKESKSDKKNCTSAIV
SAEKYKTIERRKHFFLEKIRPFRYQGGTQVQVMQSYIDYGGAELISQYLASKRSFSQSFD
RYLRKILVILCENTIAIRTKAMKCLAMIVEADPSVLARPDMQIGVNRSFLDQSTAVREAA
VDLVGKFVLSRHDLIDKYYGMLSNRILDTGVSVRKRVIKILKDICIECPEFPKIPEICVK
MIRRVNDEEGIRKLVMEVFQNMWFXPCAAARPGALDMTAAAAAADPLTRKVLNITDVVIS
SRDIGLEWFQQLLMSLFKPKEDKDDSTKIIYQPPKSLLVACQQIVDCLVESLLHLEETST
DGTGSSQRILACLSTLHLFAKIRPQLLVNHALTLQPYLSLKGQNQYEQQIMSTVASTLEL
VVPLMEHPSEVFLAQLEEAAVTLILQRGQLVIASCIACLAAIVNNLTHNYKLIRDVFNKY
HGILLQWKQSWQRNPDMTRALHSRPYFRRALFIVGLLLRYFDFTEAKVVEGLPHDIKEQV
YSTLMFFVGLEDEDFVSNTLKALGSVCVRHYEFMLRPELKEFYHQLLTSDLAPIEMKADV
LRNIEMYLQEEEQRMIRQDKEWSKRSKHENLKEMGDVSSGMASTVIQLYLKEILGSSLHP
STVVRSAAMKVVQLVLAQGLVHPVQIVPYLISMSTDLEVTVSHTADKNLQEIDKKYPGFI
HMKAQLGIKLSYQLQKILQSNMERGVIRGFRKKDQDDLPTALNGFLYSLLRNTRPQRRAL
VLSLLKQFDDVSTAPLDQMLYLADNLSYFPYQVQDEPLFIIHHIDIIISTSGSNLLQHFR
EGLNKTNTEEKELPGSVEDEEEDDEEAEALVARLPERTRALRDAMRQARGCLLLLVLKQH
LKQLYGFTDAKINQYSPSESVKVYEKAVSRRHAPIFEPKATIAQLHEDECDDELDERGRR
RLVDDYLEFKQLMLKFDPEEEEEEESGAAGAGERAAVRRRRAARRARRAAQARPAPTPSA
ARRARPSSPRHGPNAPCGRRGAPVCAVCSARVSRAGRGRSPVREEDRFLFLSIG
NT seq
6105 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagagggatattccaagtgttcccattacaacattagcaggagtagccagccta
acagacctattaccggtgttaccactcccaacaccattaccatcaacacttaacaacaag
tcacaactgtttcatcccctagtggctgaggaagcagcaaagttactggcaactcgtgac
aaggatttagtctcacagctgcttgattctcttatgcaaacatctgtccggaatatagac
ctgaaagatgatagtataccaaatgcagtcagtccaccaccccaacaacagcctacgcct
gagttgctaaaggccattttaagcatcaatcccaatngttttgatcaacaacaacagaac
cattggggtaacaacctacattcatcaaagtttaatggaatgtcgccctcgngttcatac
aactatacatcacataatgctgtgccttcaagtccgtcaactcatgggacaccaattcat
tctgcaaccattccaaatcaacaattattagctccgccatgtcaatcttcaccccatgtg
aacatgggatcacctccctcacaagcaaggccagggagccaggtgaacataactgcccaa
aataatatttcccccatttggaacagcgcaaattcttccaatatatatacaagtccacta
tccaatacttcatgttctactccacaaaatggtggtttctacaatagtttagttcaagac
acccaaaatttcgcgaccagtataagcgaagacaaagatccattgtcaatgtcaccgagg
aatcagtgtgatcaacaaagattacatttgcaatctcaggataaagcatttgagcaagat
ggtaatgtggtgacaggtcaatcgccggcgcaagccagtgtagcgccgtcgccgctccga
caggaaccgcaagtgcctcagccgtcgatgggagcgccctacgcacctccgctctctcac
agcacgcacgagaagcaagaccttcacaaacctgttaataccaatagcaaatatcctgtg
gtcaagcttggacgtttatcggagggtctattgaagaagcacgagttttcccatgaagac
agacctaggaaaaacagtacacttgagtcagattccgacgataacatgcccttgaaagcg
aaacccagtaactttacgccgaatgtagataaagagagagaagcaatagacatagctaga
gagaaaaattgggaagcagtcaagagaaaacatgaagaagccagcaaaaaagtggaggcc
gaagccgcaatcgtgcgaccgaaacttcgcaaagtggagcggcgtttggtaccggtttta
gaaatgttatcagtagacgaactgatggaaacaaacacctaccaacgtttcaacaaatta
attgaatcagtattcgaagctattgacgacgatatattaataacggatgaaatggaaggg
acagacatacccgaggaattattactaccgcgttaccaactgcaggagttgagtgcggaa
gcagctaaattaaagaaccttggtgctatggaagcgataccttcagacagattagtcaga
ttgttaaatatattggagaaaaatattagagcagcagagaaaatgtcgcttgtgggtgat
cctgaagatagtgaagaaatgagacagatatggatagagtcggcattagagcgagttatg
tgcgcgtccgatgcctgcctcacatcattgtacataatgacgtcccccagtatgcccaag
cgcatatttttagaagatgttatagatagaattattatgttcataaaattccaactcaac
aatactatttactgtgtttacgacccagtgtatagtattcagacaacatctaaaaagaaa
gtggacgggcgcaagcggcgcggcggcggctcgacgcacgccacgcggcgctgcggcggc
tccacgcgcgccgtgaaggagctgtacacgcacgcgcacgagagcgtggcgctgctggcc
gagctgttcgcggcgcaccacctcacggacaccacggtgctgcacgcctccaccgtgggc
gtgtcgcccttcttcgtcgagaatgtcagcgagctccaactcgccgcgctcaagctcgtc
accacgatattcacaaaatacgaacaacaccggcgactgctgctggaagacatcctggcg
tcgatagcgcggatcccgagctcgaagcacaacctgcgctcgttccagctgagcacggac
cagcacatacagatgctcacggcgctggtgctgcagctggtgcagtgcgtcgtcacgctg
ccggagacgctgtgcaagtcccaggataaggataaagagcacgccgacacttccgagagc
aaaaaacacatagataaagatctaatgataatatctaagtacgaagcggcaatcagtgtg
ggtggtacattcctaacatcattcctaaacaaatgccgaagtcgatcggaagaagtggac
ttcaggcctctgttcgagaacttcgtgcatgacctcctgaccacagtcaacaaacccgag
tggcctgcgactgaactgctgcttagcttacttggtacaatgcttgtgaagtacatgtcg
gacaagtcgatggagatgtcggtgcgcgtggcgtcgctggagtacctcgggctggtggcg
gcgcggctgcggcgcgacagcgtgcactcgcgcgccaagctcgccaccatggaccacgtc
atacgcgacatccgcgccgaggaggagaaggacggcaaccaagcacagggtgtaactttc
ggcctcgatgaagacgaagaaagaacggaatttctccaacgcgttttattagattatcta
gcaataaacggacagaaagaccaagcctggaactgcgctcgacatttttatattacacag
tggtatagggacatggttgtccaaccgaaaagcagttcgccgacaaaaagaccgaaaaat
aaaacgaaaaagcggcacaaggacgattctacagatgaagaatctgaaattgacgaagat
agtgacggtggaataaaggaatccaagtctgacaagaaaaattgcaccagcgcgatcgtt
tccgccgaaaaatataaaacaatagaaagacgtaagcatttctttctcgagaaaataaga
ccgttcaggtaccagggcggcacgcaggtccaggtgatgcagtcgtacatagactacggc
ggggccgagttgatctcgcagtacctggcctcgaagagatccttctcgcagagcttcgac
aggtatttaaggaagatactcgtgatattgtgcgagaacacgatcgcgattcgtacgaag
gccatgaagtgtctagcgatgatagtggaggcggacccctcggtgctggcgcggcccgac
atgcagatcggcgtcaaccgctccttcctggaccagtccacggctgtgcgcgaggccgcc
gtggacctcgtcggcaagttcgtgctcagtcgacacgatctcatcgacaagtattacgga
atgctctccaacaggatattagataccggtgtatctgtacgaaagcgtgtaataaagatt
cttaaagatatatgtatagagtgtccggagttcccaaagatcccggagatatgcgtgaaa
atgatccgccgggtgaacgacgaggagggcatccgcaagttggtgatggaggtattccag
aacatgtggttcnagccgtgcgcggcggcgcggcccggcgcgctggacatgacggccgcc
gccgccgccgccgacccgctcacgcgcaaggtgctcaacatcaccgacgtcgtcatctcc
tcgcgcgacatcggcctcgagtggttccagcagttgctcatgagcttgtttaaacccaag
gaagataaagatgactcaacaaaaataatatatcaaccgcctaaatccctattagttgct
tgtcaacaaatcgtagattgtcttgttgagagtttacttcacttggaggaaacaagcaca
gatggaacgggttcctctcaacgtattttggcgtgcctttccactctgcatttatttgct
aaaataaggcctcaattactagttaatcacgcattaacacttcaaccatatcttagctta
aaggggcagaaccaatacgaacagcaaataatgtcgacggtggcgtcaactctagaacta
gttgttccactgatggagcaccctagcgaagtattcttggctcagctggaggaagccgca
gtgacgctgatactgcagcgcggccagctggtcatcgcgtcctgtatagcgtgcctagcc
gccatcgtcaacaacctcacgcataactacaaactcatacgggatgtgttcaacaaatac
cacggtatcctgctccaatggaagcaaagttggcagaggaaccctgatatgacgcgggcg
ttgcactcgaggccttatttccggcgggcattgtttatcgtaggactgcttttgcggtac
ttcgactttacagaagcaaaagtcgtagaaggtcttccacatgatataaaagagcaggtt
tactcaacgttaatgttttttgtggggcttgaggatgaagactttgtgtcaaacacgctg
aaagcgctcggttcggtgtgtgtgagacattacgagtttatgttgcggcctgaacttaaa
gagttttaccaccagctccttacgtcggacttggcgccgatcgaaatgaaagcggacgtg
ctcaggaacatagaaatgtacttacaagaggaggagcagagaatgatcagacaggataaa
gaatggtcgaagcggtccaagcatgagaatctgaaagagatgggagacgtgtcctccggc
atggcgtcgacggtgatccagctgtacttgaaggagatcctaggctcgtctctgcacccc
agcacggtggtgcggtctgccgccatgaaggtggtgcagctcgtgctggcgcagggtctc
gtgcatcccgtgcagattgttccatatttgataagtatgagtactgacttggaggtgacg
gtgtcacacacagctgataaaaaccttcaagaaattgacaagaagtatcctggatttatt
cacatgaaagcacaactcggaatcaagctgtcgtatcaactgcagaaaatattacaatcg
aacatggaaagaggtgttatacgaggattcagaaaaaaggatcaggacgatttaccgact
gccctcaatggttttctgtattcgttattgcgtaacacacggccacaacgaagagcgcta
gtgttatcattattaaaacaatttgatgatgtttctactgcacctttggatcaaatgttg
tacctggctgataatttaagctactttccgtatcaagtacaagacgaaccactttttatt
atacaccatatcgatataattatttcaacctcgggatcaaacttactacagcattttcgt
gaggggttgaacaaaacgaacacggaggagaaggagctgccggggtccgtggaggacgag
gaggaggacgacgaggaggcggaggcgctggtggcgcggctgccggagcgcacgcgcgcg
ctgcgcgacgccatgcgccaggcgcgcggctgtctgctgctgctcgtgctcaagcagcac
ctcaagcagctctacggcttcaccgacgcgaaaataaaccaatactccccctcagaaagc
gtaaaagtgtatgagaaagcagtgtcgcgacggcacgcgcccattttcgaaccgaaagct
acaatcgcgcaactgcacgaggatgagtgcgatgacgagctggacgagcggggtcgtcgc
cggctcgtcgacgactacctcgaattcaagcagctcatgctgaagttcgaccccgaagag
gaggaggaagaggagtcgggcgcagcgggcgcgggggagcgggcggcggtgcggcggcgg
cgggcggcgcggcgggcgcggagagcagcgcaggcgcggccggcgccgacacctagcgcc
gcccgccgcgcgcgcccgagctcgccgcgccacggaccgaacgcgccgtgcggtagacgc
ggcgccccggtgtgtgcagtgtgcagtgcgcgtgtgtcgcgggccggccgcggacgttcg
ccggtccgtgaggaggaccgattcttatttctctcgattggttaa
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integrated database retrieval system
